Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.5e-197 692.6 337 100.0
SEGI_14080 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.5e-197 692.6 337 100.0
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 2.4e-150 535.8 333 78.4
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.5e-149 533.1 336 77.7
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 3.8e-148 528.5 337 76.3
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 7.9e-146 520.8 334 75.4
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 5.1e-145 518.1 334 75.4
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 6.7e-145 517.7 337 74.8
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 6.7e-145 517.7 333 76.9
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 1.5e-144 516.5 334 74.9
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 1.5e-144 516.5 334 74.9
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 2.0e-144 516.2 336 75.0
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 2.6e-144 515.8 334 75.1
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 3.3e-144 515.4 334 74.6
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 3.3e-144 515.4 334 74.6
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 4.4e-144 515.0 337 74.2
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 7.4e-144 514.2 334 75.7
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 7.4e-144 514.2 334 74.9
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 9.7e-144 513.8 336 74.7
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 1.3e-143 513.5 329 75.4
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 2.2e-143 512.7 331 75.2
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 2.8e-143 512.3 334 74.6
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 2.8e-143 512.3 331 75.8
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.8e-143 511.5 334 74.3
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 8.2e-143 510.8 334 74.6
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 8.2e-143 510.8 334 74.3
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 1.1e-142 510.4 336 74.1
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 1.8e-142 509.6 334 72.5
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 2.4e-142 509.2 336 74.1
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 2.4e-142 509.2 335 74.3
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 3.1e-142 508.8 333 75.1
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 3.1e-142 508.8 333 75.4
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 3.1e-142 508.8 337 74.2
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 7.0e-142 507.7 334 72.2
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 7.0e-142 507.7 334 72.2
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 7.0e-142 507.7 332 75.0
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 7.0e-142 507.7 337 73.0
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 9.1e-142 507.3 334 73.7
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 2.0e-141 506.1 330 73.6
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 2.6e-141 505.8 334 72.5
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 4.5e-141 505.0 332 74.7
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 4.5e-141 505.0 331 74.9
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 4.5e-141 505.0 334 74.0
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 5.9e-141 504.6 336 72.9
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 5.9e-141 504.6 332 72.6
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 7.7e-141 504.2 337 72.7
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 1.0e-140 503.8 330 74.2
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 1.7e-140 503.1 334 72.2
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 1.7e-140 503.1 334 71.9
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 1.7e-140 503.1 334 71.6
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 2.2e-140 502.7 332 74.4
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 5.0e-140 501.5 334 71.6
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 5.0e-140 501.5 334 71.6
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 5.0e-140 501.5 334 71.6
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 8.5e-140 500.7 331 74.9
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 8.5e-140 500.7 334 74.0
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 8.5e-140 500.7 334 73.1
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 1.1e-139 500.4 334 71.6
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 1.1e-139 500.4 330 72.1
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 1.1e-139 500.4 337 73.9
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 1.9e-139 499.6 331 73.7
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.9e-139 499.6 325 73.2
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 3.2e-139 498.8 334 70.4
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 4.2e-139 498.4 334 71.3
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 4.2e-139 498.4 332 73.5
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 5.5e-139 498.0 334 71.0
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 1.6e-138 496.5 336 71.4
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 1.6e-138 496.5 331 72.8
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 3.6e-138 495.4 333 72.1
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 3.6e-138 495.4 332 73.5
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 8.0e-138 494.2 332 72.3
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 8.0e-138 494.2 332 72.3
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 1.4e-137 493.4 332 72.0
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 2.3e-137 492.7 334 72.2
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 5.2e-137 491.5 332 72.0
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 5.2e-137 491.5 330 72.1
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 4.4e-136 488.4 332 71.7
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 5.7e-136 488.0 332 70.8
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 7.4e-136 487.6 332 71.1
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 9.7e-136 487.3 332 72.3
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 1.3e-135 486.9 337 70.3
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 1.3e-135 486.9 335 71.0
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 5.3e-134 481.5 334 69.8
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 5.0e-132 474.9 337 69.7
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 1.5e-131 473.4 332 69.0
Gohir.A12G133950 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.1e-126 455.3 298 74.2
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 6.1e-122 441.4 333 66.7
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 8.3e-119 431.0 338 60.9
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 1.3e-95 354.0 338 50.3
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 6.8e-89 331.6 237 68.4
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 1.5e-88 330.5 251 66.1
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 2.9e-87 326.2 302 58.3
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 1.7e-84 317.0 290 54.1
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 9.6e-75 284.6 185 78.4
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 6.2e-66 255.4 263 46.0
TAR374G0728 Trochodendron aralioides HOM05D003919 ORTHO05D004906 6.2e-66 255.4 249 46.2
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 1.8e-65 253.8 249 47.8
VMungo0251G1503 Vigna mungo HOM05D003919 ORTHO05D004906 2.6e-64 250.0 249 47.0
arahy.Tifrunner.gnm1.ann1.5S361I Arachis hypogaea HOM05D003919 ORTHO05D004906 5.8e-64 248.8 249 46.6
FAN22G1631 Fragaria x ananassa HOM05D003919 ORTHO05D004906 2.1e-61 240.4 249 45.4
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.1e-54 218.0 176 60.2
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 3.2e-54 216.5 176 59.7
Psat0s1455g0040 Pisum sativum HOM05D003919 ORTHO05D004906 1.3e-52 211.1 203 55.7
Cpa.g.sc0.155 Carica papaya HOM05D003919 ORTHO05D004906 9.6e-51 204.9 333 42.6
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.9e-38 164.1 127 66.9
Cpa.g.sc0.157 Carica papaya HOM05D003919 ORTHO05D004906 1.2e-32 144.8 130 45.4
MBI03_g34502_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 2.6e-32 143.7 145 43.4
SEGI_22186 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 7.7e-24 115.5 104 50.0
MBI03_g34501_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 2.9e-23 113.6 104 49.0
Cpa.g.sc0.159 Carica papaya HOM05D003919 ORTHO05D004906 1.5e-22 111.3 110 46.4
Oeu055860.1 Olea europaea HOM05D003919 ORTHO05D004906 4.2e-22 109.8 104 49.0
Cpa.g.sc0.156 Carica papaya HOM05D003919 ORTHO05D004906 1.4e-20 104.8 115 52.2
HPP92_012883 Vanilla planifolia HOM05D000456 ORTHO05D004906 1.4e-20 104.8 105 44.8
COL.COLO4_13756 Corchorus olitorius HOM05D003919 ORTHO05D004906 4.0e-20 103.2 104 47.1
C07p44430 Brassica napus HOM05D003919 ORTHO05D004906 1.1e-19 101.7 104 46.2
FAN25G1432 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.1e-19 101.7 106 46.2
FAN14G1298 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.5e-19 101.3 104 47.1
FAN27G1315 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.3e-19 100.1 104 46.2
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 7.5e-19 99.0 283 25.1
HPP92_012910 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.3e-18 98.2 97 44.3
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 2.8e-18 97.1 276 28.3
GSVIVG01012339001 Vitis vinifera HOM05D003353 ORTHO05D003751 8.8e-12 75.5 51 74.5
HPP92_012908 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.0e-07 62.0 270 23.7
Oeu045313.1 Olea europaea HOM05D002342 ORTHO05D002407 9.5e-06 55.5 215 24.7


User provided reference genes

Program Settings