Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 6.0e-109 397.5 199 100.0
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 1.7e-63 246.5 163 73.6
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 8.8e-60 234.2 163 68.7
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 1.1e-59 233.8 161 70.2
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.5e-59 233.4 163 69.9
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 3.3e-59 232.3 161 67.1
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 7.4e-59 231.1 168 67.9
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 9.7e-59 230.7 163 67.5
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 8.2e-58 227.6 171 66.7
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 2.4e-57 226.1 165 66.7
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 4.1e-57 225.3 165 67.9
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 5.3e-57 224.9 179 65.4
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 2.6e-56 222.6 162 68.5
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 5.9e-56 221.5 168 63.7
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 1.3e-55 220.3 161 65.8
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 1.3e-55 220.3 164 64.6
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 3.8e-55 218.8 173 60.7
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 3.8e-55 218.8 173 60.7
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 8.5e-55 217.6 165 65.5
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 1.4e-54 216.9 165 66.1
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 1.4e-54 216.9 165 65.5
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 1.9e-54 216.5 162 64.2
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 3.2e-54 215.7 166 64.5
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 9.4e-54 214.2 171 61.4
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 1.2e-53 213.8 169 62.1
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 1.2e-53 213.8 161 64.0
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 1.2e-53 213.8 165 63.6
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 1.6e-53 213.4 169 60.4
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 2.7e-53 212.6 162 64.8
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 2.7e-53 212.6 162 64.8
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 3.6e-53 212.2 167 62.9
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 6.1e-53 211.5 166 63.9
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 7.9e-53 211.1 166 63.9
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 1.4e-52 210.3 173 61.3
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 1.8e-52 209.9 164 62.2
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 2.3e-52 209.5 169 58.6
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 3.0e-52 209.1 174 60.9
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.0e-52 209.1 184 56.5
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 3.0e-52 209.1 167 61.7
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 3.0e-52 209.1 195 55.9
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 5.2e-52 208.4 204 54.4
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 5.2e-52 208.4 164 61.6
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 5.2e-52 208.4 167 62.9
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 6.7e-52 208.0 162 63.6
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 3.3e-51 205.7 164 61.0
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 7.4e-51 204.5 168 60.1
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 1.3e-50 203.8 167 60.5
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.3e-50 203.8 162 60.5
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 1.7e-50 203.4 169 57.4
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 2.2e-50 203.0 162 60.5
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 2.8e-50 202.6 167 60.5
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 3.7e-50 202.2 162 59.9
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 3.7e-50 202.2 162 59.9
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.8e-49 199.9 162 59.3
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 3.1e-49 199.1 170 57.6
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 3.1e-49 199.1 194 53.6
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 4.1e-49 198.7 169 58.0
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 5.3e-49 198.4 171 56.7
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 9.1e-49 197.6 196 53.1
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 9.1e-49 197.6 170 57.6
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 9.1e-49 197.6 166 58.4
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.2e-48 197.2 164 57.3
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 1.2e-48 197.2 159 62.3
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 1.6e-48 196.8 175 57.1
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 2.6e-48 196.1 172 55.8
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 3.5e-48 195.7 169 56.2
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 5.9e-48 194.9 167 56.3
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 5.9e-48 194.9 187 51.9
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 1.0e-47 194.1 167 57.5
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 2.2e-47 193.0 165 55.8
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 3.8e-47 192.2 161 60.9
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 6.5e-47 191.4 167 56.3
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 6.5e-47 191.4 167 56.3
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 6.5e-47 191.4 167 57.5
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 8.5e-47 191.0 167 56.3
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 1.5e-46 190.3 167 53.9
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 2.5e-46 189.5 167 54.5
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 2.5e-46 189.5 167 54.5
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 3.2e-46 189.1 167 55.1
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 3.2e-46 189.1 167 55.1
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 4.2e-46 188.7 167 56.3
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 4.2e-46 188.7 167 54.5
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 5.5e-46 188.3 168 54.8
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 5.5e-46 188.3 167 54.5
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 1.2e-45 187.2 167 53.9
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 1.2e-45 187.2 167 53.9
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 3.6e-45 185.7 192 53.1
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 8.0e-45 184.5 162 58.6
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 8.0e-45 184.5 176 52.8
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.0e-44 184.1 162 58.6
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.4e-44 183.7 171 52.6
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 1.8e-44 183.3 170 58.8
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 1.8e-44 183.3 171 55.0
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 3.0e-44 182.6 164 58.5
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 4.0e-44 182.2 180 53.9
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 5.2e-44 181.8 168 54.2
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 5.2e-44 181.8 164 57.3
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 8.8e-44 181.0 168 53.0
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 8.8e-44 181.0 164 56.7
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 3.7e-42 175.6 166 53.0
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 4.8e-42 175.3 161 55.9
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 4.8e-42 175.3 161 55.9
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 7.0e-41 171.4 161 55.3
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 2.9e-39 166.0 137 59.1
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 1.5e-35 153.7 138 58.0
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 3.4e-35 152.5 108 63.0
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 7.5e-35 151.4 112 67.9
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 1.5e-22 110.5 167 37.1
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 3.6e-21 105.9 83 66.3
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 3.6e-21 105.9 156 34.6
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 1.8e-20 103.6 67 74.6
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 2.6e-19 99.8 105 49.5
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 1.3e-18 97.4 96 54.2
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 2.2e-18 96.7 67 70.1
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 4.9e-18 95.5 67 70.1
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 4.1e-17 92.4 76 53.9
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 7.0e-17 91.7 82 53.7
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 9.2e-17 91.3 162 32.7
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 9.2e-17 91.3 162 32.7
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 2.3e-12 76.6 86 48.8
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 4.0e-12 75.9 62 61.3
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 1.1e-09 67.8 41 75.6
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 7.8e-08 61.6 56 57.1
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.7e-07 60.5 41 65.9


User provided reference genes

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