Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 3.1e-96 355.1 182 100.0
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 1.7e-46 189.9 169 58.6
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 6.6e-46 188.0 180 53.3
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 4.4e-42 175.3 181 53.6
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.3e-41 173.7 181 53.6
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 6.4e-41 171.4 123 68.3
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 6.4e-41 171.4 181 53.0
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 9.2e-40 167.5 182 51.6
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 6.6e-38 161.4 174 51.1
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.1e-37 160.6 175 52.0
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 1.5e-37 160.2 177 50.8
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 1.6e-36 156.8 177 45.8
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.6e-36 156.8 175 50.9
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 2.1e-36 156.4 176 47.7
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 8.1e-36 154.5 178 48.3
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 1.1e-35 154.1 181 49.7
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 1.4e-35 153.7 180 47.2
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 1.8e-35 153.3 180 47.2
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 2.3e-35 152.9 183 47.5
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 6.8e-35 151.4 172 50.0
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 1.5e-34 150.2 177 48.0
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 1.5e-34 150.2 177 48.0
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.5e-34 150.2 179 48.6
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 2.0e-34 149.8 178 46.1
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 2.6e-34 149.4 180 46.7
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 2.6e-34 149.4 185 47.0
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 4.4e-34 148.7 171 49.1
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 4.4e-34 148.7 176 47.2
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 5.8e-34 148.3 185 47.6
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 7.6e-34 147.9 182 45.6
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 9.9e-34 147.5 179 47.5
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 1.7e-33 146.7 178 48.3
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 1.7e-33 146.7 184 46.2
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 1.7e-33 146.7 170 50.0
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 2.2e-33 146.4 180 46.1
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 2.2e-33 146.4 182 46.7
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 2.2e-33 146.4 178 45.5
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 2.9e-33 146.0 179 45.3
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 4.9e-33 145.2 172 47.1
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 4.9e-33 145.2 176 47.2
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 8.4e-33 144.4 172 50.0
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 1.9e-32 143.3 177 48.0
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 4.1e-32 142.1 169 43.2
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 5.4e-32 141.7 184 46.2
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 9.2e-32 141.0 175 46.9
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 1.2e-31 140.6 181 45.9
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 2.1e-31 139.8 181 45.9
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 2.7e-31 139.4 176 46.6
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 6.0e-31 138.3 174 43.7
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.0e-30 137.5 175 47.4
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 1.0e-30 137.5 186 46.2
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 1.0e-30 137.5 180 43.3
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 1.0e-30 137.5 164 47.0
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 1.7e-30 136.7 166 48.8
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.7e-30 136.7 180 42.2
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 1.7e-30 136.7 170 44.7
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.3e-30 136.3 174 44.3
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 3.9e-30 135.6 203 40.9
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 5.1e-30 135.2 185 42.2
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 8.6e-30 134.4 172 43.6
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 8.6e-30 134.4 168 45.8
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 1.1e-29 134.0 179 44.1
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 1.9e-29 133.3 163 47.2
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.3e-29 132.5 177 41.8
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 3.3e-29 132.5 169 44.4
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 5.6e-29 131.7 168 44.6
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 9.6e-29 131.0 172 43.0
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 1.6e-28 130.2 165 43.0
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 2.1e-28 129.8 201 41.8
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 2.8e-28 129.4 165 46.1
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 4.7e-28 128.6 180 40.0
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 4.7e-28 128.6 198 42.9
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 6.2e-28 128.3 171 42.7
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 6.2e-28 128.3 166 42.8
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 2.4e-27 126.3 171 41.5
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 2.4e-27 126.3 172 42.4
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 2.4e-27 126.3 190 42.1
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 2.4e-27 126.3 171 42.7
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 4.0e-27 125.6 177 42.9
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 4.0e-27 125.6 179 43.6
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 6.9e-27 124.8 172 41.3
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 8.9e-27 124.4 172 41.3
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 1.2e-26 124.0 171 40.9
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 1.2e-26 124.0 171 40.9
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.2e-26 124.0 186 42.5
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 1.5e-26 123.6 183 41.0
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 3.4e-26 122.5 177 40.1
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 3.4e-26 122.5 171 40.4
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 4.9e-25 118.6 167 40.7
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 8.4e-25 117.9 190 41.1
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 2.3e-22 109.8 122 50.8
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 3.9e-22 109.0 153 42.5
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.4e-19 99.8 148 37.8
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 4.0e-19 99.0 276 30.1
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 4.9e-17 92.0 178 36.5
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 3.2e-16 89.4 169 37.9
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 5.4e-16 88.6 157 38.9
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 1.0e-14 84.3 96 42.7
MCO13G488 Micromonas commoda HOM05D000062 ORTHO05D000043 9.0e-11 71.2 130 31.5
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 1.5e-10 70.5 90 44.4
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 2.6e-10 69.7 179 30.7
SGA_v2.0_scaffold191G40453 Striga asiatica HOM05D006451 ORTHO05D007680 9.9e-10 67.8 126 36.5
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 1.7e-09 67.0 92 42.4
DCAR_027237 Daucus carota HOM05D006451 ORTHO05D007680 2.2e-09 66.6 118 38.1
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 2.9e-09 66.2 115 35.7
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 2.9e-09 66.2 115 35.7
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 2.9e-09 66.2 115 35.7
BraA08t35607Z Brassica rapa HOM05D006451 ORTHO05D007680 2.9e-09 66.2 115 35.7
MSTRG.4055 Avicennia marina HOM05D006451 ORTHO05D007680 3.8e-09 65.9 118 36.4
CsaV3_2G013500 Cucumis sativus L. HOM05D006451 ORTHO05D007680 4.9e-09 65.5 117 35.9
AL1G23580 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 6.4e-09 65.1 127 33.9
A08p37070 Brassica napus HOM05D006451 ORTHO05D007680 6.4e-09 65.1 115 34.8
CBR_g18988 Chara braunii HOM05D006451 ORTHO05D007680 8.4e-09 64.7 119 34.5
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 8.4e-09 64.7 94 41.5
Ah.07g204140 Amaranthus hybridus HOM05D006451 ORTHO05D007680 1.1e-08 64.3 118 36.4
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 1.9e-08 63.5 119 35.3
CiPaw.01G196900 Carya illinoinensis HOM05D006451 ORTHO05D007680 2.4e-08 63.2 120 34.2
AUR62034703 Chenopodium quinoa HOM05D006451 ORTHO05D007680 2.4e-08 63.2 118 34.7
AUR62043956 Chenopodium quinoa HOM05D006451 ORTHO05D007680 3.2e-08 62.8 116 35.3
BcaC07g41712 Brassica carinata HOM05D002462 ORTHO05D002893 4.2e-08 62.4 115 34.8
C08p47480 Brassica napus HOM05D002462 ORTHO05D002893 4.2e-08 62.4 115 34.8
CANSAT78G2142 Cannabis sativa HOM05D006451 ORTHO05D007680 4.2e-08 62.4 121 33.1
Glyma.10G003800 Glycine max HOM05D006451 ORTHO05D007680 5.5e-08 62.0 118 34.7
Lj6A610G48 Lonicera japonica HOM05D006451 ORTHO05D007680 5.5e-08 62.0 117 36.8
QL06p001354 Quercus lobata HOM05D006451 ORTHO05D007680 5.5e-08 62.0 118 34.7
Sed0008444 Sechium edule HOM05D002462 ORTHO05D002893 5.5e-08 62.0 122 35.2
THA.LOC104826059 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 5.5e-08 62.0 115 36.5
AagrBONN_evm.TU.Sc2ySwM_368.3405 Anthoceros agrestis HOM05D001789 ORTHO05D001755 7.1e-08 61.6 123 32.5
Gohir.A01G023900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 9.3e-08 61.2 132 33.3
Gohir.D01G021900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 9.3e-08 61.2 132 33.3
Gorai.002G024400 Gossypium raimondii HOM05D006451 ORTHO05D007680 9.3e-08 61.2 132 33.3
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 9.3e-08 61.2 110 41.8
Lj6g0024617 Lotus japonicus HOM05D006451 ORTHO05D007680 9.3e-08 61.2 128 33.6
Manes.15G032000 Manihot esculenta HOM05D006451 ORTHO05D007680 9.3e-08 61.2 134 32.8
Cc03_g04170 Coffea canephora HOM05D006451 ORTHO05D007680 1.2e-07 60.8 117 35.0
TAR362G1293 Trochodendron aralioides HOM05D006451 ORTHO05D007680 1.2e-07 60.8 136 34.6
Haze_11218 Corylus avellana HOM05D006451 ORTHO05D007680 1.6e-07 60.5 143 32.2
Zm00001eb248730 Zea mays HOM05D002462 ORTHO05D002893 1.6e-07 60.5 99 36.4
Os02g0644100 Oryza sativa ssp. japonica HOM05D002462 ORTHO05D002893 2.1e-07 60.1 112 34.8
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.1e-07 60.1 99 35.4
QL93p0107_0053 Quercus lobata HOM05D002462 ORTHO05D007680 2.1e-07 60.1 108 34.3
Aqoxy2G03443 Aquilegia oxysepala HOM05D006451 ORTHO05D007680 2.7e-07 59.7 116 36.2
BolC8t52289H Brassica oleracea HOM05D002462 ORTHO05D002893 3.5e-07 59.3 115 33.9
Cpa.g.sc29.105 Carica papaya HOM05D002462 ORTHO05D002893 4.6e-07 58.9 99 35.4
FvH4_4g00880 Fragaria vesca HOM05D006451 ORTHO05D007680 4.6e-07 58.9 117 33.3
FAN12G3362 Fragaria x ananassa HOM05D006451 ORTHO05D007680 4.6e-07 58.9 117 33.3
FAN17G1940 Fragaria x ananassa HOM05D006451 ORTHO05D007680 4.6e-07 58.9 117 33.3
FAN22G0671 Fragaria x ananassa HOM05D006451 ORTHO05D007680 4.6e-07 58.9 117 33.3
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 4.6e-07 58.9 118 31.4
A09p63960 Brassica napus HOM05D002462 ORTHO05D002893 6.0e-07 58.5 117 35.0
COL.COLO4_21546 Corchorus olitorius HOM05D006451 ORTHO05D007680 6.0e-07 58.5 118 34.7
MD16G1198200 Malus domestica HOM05D006451 ORTHO05D007680 6.0e-07 58.5 96 36.5
Thecc.04G237100 Theobroma cacao HOM05D006451 ORTHO05D007680 6.0e-07 58.5 118 34.7
AL1G23570 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 7.9e-07 58.2 97 35.1
BcaC07g42200 Brassica carinata HOM05D006451 ORTHO05D007680 7.9e-07 58.2 122 33.6
CBR_g6631 Chara braunii HOM05D002462 ORTHO05D002893 7.9e-07 58.2 127 31.5
BraA09t41742Z Brassica rapa HOM05D002462 ORTHO05D002893 1.0e-06 57.8 117 35.0
MCO15G306 Micromonas commoda HOM05D001789 ORTHO05D001755 1.0e-06 57.8 143 30.8
Nn6g34139 Nelumbo nucifera HOM05D006451 ORTHO05D007680 1.0e-06 57.8 91 38.5
RcHm_v2.0_Chr4g0387501 Rosa chinensis HOM05D006451 ORTHO05D007680 1.0e-06 57.8 119 33.6
Os12g0604800 Oryza sativa ssp. japonica HOM05D006451 ORTHO05D007680 1.3e-06 57.4 117 32.5
Ciclev10005444m.g Citrus clementina HOM05D006451 ORTHO05D007680 1.8e-06 57.0 118 33.1
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.8e-06 57.0 85 38.8
THA.LOC104817311 Tarenaya hassleriana HOM05D005920 ORTHO05D007211 1.8e-06 57.0 133 34.6
Ah.02g122160 Amaranthus hybridus HOM05D000868 ORTHO05D000711 2.3e-06 56.6 179 28.5
Duzib052G1229 Durio zibethinus HOM05D006451 ORTHO05D007680 2.3e-06 56.6 118 33.9
Thhalv10028662m.g Eutrema salsugineum HOM05D005920 ORTHO05D007211 2.3e-06 56.6 133 33.8
Os02g0494400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.0e-06 56.2 109 33.9
PRCOL_00007018 Prasinoderma coloniale HOM05D001789 ORTHO05D001755 3.0e-06 56.2 105 37.1
DCAR_014089 Daucus carota HOM05D005920 ORTHO05D007211 3.9e-06 55.8 141 31.9
Manes.18G076800 Manihot esculenta HOM05D005920 ORTHO05D007211 3.9e-06 55.8 125 33.6
SMO134G0039 Selaginella moellendorffii HOM05D005920 ORTHO05D007211 3.9e-06 55.8 116 33.6
FvH4_2g26840 Fragaria vesca HOM05D005920 ORTHO05D007211 5.1e-06 55.5 133 33.1
FAN20G1415 Fragaria x ananassa HOM05D005920 ORTHO05D007211 5.1e-06 55.5 133 33.1
FAN24G1536 Fragaria x ananassa HOM05D005920 ORTHO05D007211 5.1e-06 55.5 133 33.1
FAN27G1284 Fragaria x ananassa HOM05D005920 ORTHO05D007211 5.1e-06 55.5 133 33.1
PGR031G0384 Punica granatum HOM05D002462 ORTHO05D002893 5.1e-06 55.5 99 35.4
Zm00001eb186100 Zea mays HOM05D002462 ORTHO05D002893 5.1e-06 55.5 99 34.3
AagrBONN_evm.TU.Sc2ySwM_117.1559 Anthoceros agrestis HOM05D002042 ORTHO05D019658 6.7e-06 55.1 103 38.8
AT4G08320 Arabidopsis thaliana HOM05D005920 ORTHO05D007211 6.7e-06 55.1 125 33.6
AUR62003781 Chenopodium quinoa HOM05D000868 ORTHO05D000711 6.7e-06 55.1 134 32.8
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 6.7e-06 55.1 123 33.3
CARHR259410 Cardamine hirsuta HOM05D005920 ORTHO05D007211 8.7e-06 54.7 133 33.8


User provided reference genes

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