Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13237 Sequoiadendron giganteum HOM05D007914 ORTHO05D000923 5.4e-153 544.3 271 100.0
SEGI_18427 Sequoiadendron giganteum HOM05D002791 ORTHO05D003067 6.8e-63 245.0 201 69.7
SEGI_04423 Sequoiadendron giganteum HOM05D000090 ORTHO05D000658 1.4e-52 210.7 187 60.4
SEGI_30400 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-34 150.6 103 69.9
SEGI_20401 Sequoiadendron giganteum HOM05D000022 ORTHO05D002153 1.4e-28 131.0 170 44.1
SEGI_01511 Sequoiadendron giganteum HOM05D007914 ORTHO05D385927 1.2e-27 127.9 107 60.7
SEGI_40132 Sequoiadendron giganteum HOM05D007914 ORTHO05D010437 1.3e-26 124.4 195 39.0
SEGI_11783 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.8e-23 114.0 184 37.0
SEGI_21247 Sequoiadendron giganteum HOM05D007914 ORTHO05D385624 5.2e-23 112.5 196 35.2
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-21 107.5 183 33.3
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-20 104.4 183 32.8
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.2e-20 102.8 183 32.2
SEGI_04173 Sequoiadendron giganteum HOM05D007914 ORTHO05D002450 5.4e-20 102.4 69 72.5
SEGI_21728 Sequoiadendron giganteum HOM05D007914 ORTHO05D002450 5.4e-20 102.4 69 72.5
SEGI_16723 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 1.8e-15 87.4 55 81.8
SEGI_04091 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 7.6e-14 82.0 54 79.6
SEGI_04345 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.9e-13 79.3 151 33.1
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 7.8e-11 72.0 50 70.0
SEGI_29502 Sequoiadendron giganteum HOM05D007914 ORTHO05D386443 1.3e-10 71.2 86 41.9
SEGI_06980 Sequoiadendron giganteum HOM05D007914 ORTHO05D020962 3.0e-10 70.1 110 36.4
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 3.0e-10 70.1 63 52.4
Nn2g14500 Nelumbo nucifera HOM05D001092 ORTHO05D000923 3.9e-10 69.7 52 61.5
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 3.9e-10 69.7 55 58.2
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.1e-10 69.3 125 36.0
Haze_00822 Corylus avellana HOM05D001092 ORTHO05D000923 6.6e-10 68.9 49 63.3
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.6e-10 68.9 140 32.9
Mapoly0076s0037 Marchantia polymorpha HOM05D001092 ORTHO05D000923 8.7e-10 68.6 63 55.6
QL06p013490 Quercus lobata HOM05D001092 ORTHO05D000923 8.7e-10 68.6 49 63.3
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 1.1e-09 68.2 60 55.0
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 1.1e-09 68.2 76 44.7
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 1.5e-09 67.8 52 57.7
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 1.5e-09 67.8 59 52.5
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 1.5e-09 67.8 49 57.1
Nitab4.5_0001977g0050 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.9e-09 67.4 59 47.5
Nitab4.5_0009459g0020 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.9e-09 67.4 59 47.5
SEGI_00547 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.5e-09 67.0 99 36.4
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 3.3e-09 66.6 59 50.8
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.3e-09 66.6 59 50.8
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.3e-09 66.6 59 50.8
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 4.3e-09 66.2 49 61.2
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 4.3e-09 66.2 53 62.3
Medtr4g123110 Medicago truncatula HOM05D001092 ORTHO05D000923 4.3e-09 66.2 50 58.0
CAN.G824.5 Capsicum annuum HOM05D001092 ORTHO05D000923 5.6e-09 65.9 49 55.1
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 5.6e-09 65.9 48 62.5
SEGI_32170 Sequoiadendron giganteum HOM05D007914 ORTHO05D386149 5.6e-09 65.9 79 46.8
SGA_v2.0_scaffold157G37366 Striga asiatica HOM05D001092 ORTHO05D000923 5.6e-09 65.9 57 54.4
Migut.G00017 Erythranthe guttata HOM05D001092 ORTHO05D000923 9.6e-09 65.1 57 52.6
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 9.6e-09 65.1 49 57.1
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 9.6e-09 65.1 49 65.3
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 9.6e-09 65.1 49 65.3
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 9.6e-09 65.1 46 63.0
Aqoxy4G01581 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 1.3e-08 64.7 74 47.3
AL1G54650 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 1.3e-08 64.7 52 50.0
AT1G48090 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 1.3e-08 64.7 52 50.0
CANSAT78G0281 Cannabis sativa HOM05D001092 ORTHO05D000923 1.3e-08 64.7 49 59.2
Carub.0001s3719 Capsella rubella HOM05D001092 ORTHO05D000923 1.3e-08 64.7 52 50.0
AUR62003914 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.3e-08 64.7 53 54.7
AUR62038227 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.6e-08 64.3 53 52.8
Ca_21396_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 1.6e-08 64.3 63 54.0
Peaxi162Scf00290g00313 Petunia axillaris HOM05D001092 ORTHO05D000923 1.6e-08 64.3 49 53.1
Atru.chr4.3076 Acer truncatum HOM05D001092 ORTHO05D000923 2.1e-08 63.9 49 57.1
BcaB07g33792 Brassica carinata HOM05D001092 ORTHO05D000923 2.1e-08 63.9 52 50.0
Cpa.g.sc146.62 Carica papaya HOM05D001092 ORTHO05D000923 2.1e-08 63.9 58 48.3
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 2.1e-08 63.9 49 55.1
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 2.1e-08 63.9 47 59.6
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 2.1e-08 63.9 49 59.2
MD16G1145300 Malus domestica HOM05D001092 ORTHO05D000923 2.1e-08 63.9 60 51.7
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 2.1e-08 63.9 49 57.1
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 2.1e-08 63.9 52 48.1
unitig_17.g29366 Utricularia gibba HOM05D001092 ORTHO05D000923 2.1e-08 63.9 69 46.4
unitig_578.g15845 Utricularia gibba HOM05D001092 ORTHO05D000923 2.1e-08 63.9 88 38.6
BcaB04g17465 Brassica carinata HOM05D001092 ORTHO05D000923 2.8e-08 63.5 52 46.2
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 2.8e-08 63.5 52 46.2
A08p06860 Brassica napus HOM05D001092 ORTHO05D000923 2.8e-08 63.5 52 46.2
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 2.8e-08 63.5 52 46.2
BolC8t47372H Brassica oleracea HOM05D001092 ORTHO05D000923 2.8e-08 63.5 52 46.2
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 2.8e-08 63.5 52 46.2
DCAR_026963 Daucus carota HOM05D001092 ORTHO05D000923 2.8e-08 63.5 56 51.8
Sopen09g004100 Solanum pennellii HOM05D001092 ORTHO05D000923 2.8e-08 63.5 49 53.1
vmacro07983 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 2.8e-08 63.5 48 62.5
A06p04720 Brassica napus HOM05D001092 ORTHO05D000923 3.6e-08 63.2 52 48.1
C06p02470 Brassica napus HOM05D001092 ORTHO05D000923 3.6e-08 63.2 52 48.1
BolC6t35374H Brassica oleracea HOM05D001092 ORTHO05D000923 3.6e-08 63.2 52 48.1
BraA06t23675Z Brassica rapa HOM05D001092 ORTHO05D000923 3.6e-08 63.2 52 48.1
CSS0029198 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 3.6e-08 63.2 48 60.4
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 3.6e-08 63.2 52 48.1
CDE02G0350 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 3.6e-08 63.2 61 49.2
Thhalv10011170m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 3.6e-08 63.2 52 46.2
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 3.6e-08 63.2 49 59.2
COL.COLO4_34529 Corchorus olitorius HOM05D001092 ORTHO05D000923 4.8e-08 62.8 49 57.1
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 4.8e-08 62.8 49 59.2
SEGI_10716 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-08 62.8 99 34.3
HanXRQChr10g0319861 Helianthus annuus HOM05D001092 ORTHO05D000923 6.2e-08 62.4 48 60.4
MSTRG.3839 Avicennia marina HOM05D001092 ORTHO05D000923 8.1e-08 62.0 48 58.3
DCAR_023379 Daucus carota HOM05D001092 ORTHO05D000923 1.1e-07 61.6 48 54.2
Gohir.A02G056800 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.1e-07 61.6 58 48.3
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.1e-07 61.6 58 48.3
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 1.1e-07 61.6 45 55.6
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 1.1e-07 61.6 47 53.2
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 1.1e-07 61.6 48 58.3
Solyc09g009370.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 1.1e-07 61.6 47 53.2
unitig_8.g4079 Utricularia gibba HOM05D001092 ORTHO05D000923 1.1e-07 61.6 57 49.1
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 1.4e-07 61.2 49 51.0
Actinidia18490 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.8e-07 60.8 48 56.2
BcaC07g37172 Brassica carinata HOM05D001092 ORTHO05D000923 1.8e-07 60.8 52 44.2
ClCG05G006770 Citrullus lanatus HOM05D001092 ORTHO05D000923 1.8e-07 60.8 48 58.3
MELO3C006741.2 Cucumis melo HOM05D001092 ORTHO05D000923 1.8e-07 60.8 48 58.3
CsaV3_3G015400 Cucumis sativus L. HOM05D001092 ORTHO05D000923 1.8e-07 60.8 48 58.3
Lj6C698G8 Lonicera japonica HOM05D001092 ORTHO05D000923 1.8e-07 60.8 49 55.1
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.8e-07 60.8 52 59.6
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 1.8e-07 60.8 46 58.7
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 2.4e-07 60.5 48 58.3
Oeu033616.1 Olea europaea HOM05D001092 ORTHO05D000923 2.4e-07 60.5 49 57.1
Sed0011983 Sechium edule HOM05D001092 ORTHO05D000923 2.4e-07 60.5 48 56.2
unitig_82.g26964 Utricularia gibba HOM05D001092 ORTHO05D000923 2.4e-07 60.5 52 51.9
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 3.1e-07 60.1 45 57.8
SalBow8G5116 Salvia bowleyana HOM05D001092 ORTHO05D000923 3.1e-07 60.1 52 55.8
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 4.0e-07 59.7 58 46.6
HPP92_008100 Vanilla planifolia HOM05D001092 ORTHO05D000923 6.9e-07 58.9 49 57.1
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 9.0e-07 58.5 48 56.2
SEGI_07992 Sequoiadendron giganteum HOM05D007914 ORTHO05D385182 9.0e-07 58.5 51 54.9
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.0e-07 58.5 73 43.8
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.0e-07 58.5 73 43.8
Gohir.D10G182400 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.2e-06 58.2 49 55.1
Gorai.011G204400 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.2e-06 58.2 49 55.1
Psat0s45g0040 Pisum sativum HOM05D001092 ORTHO05D000923 1.2e-06 58.2 45 62.2
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 1.5e-06 57.8 52 42.3
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 1.5e-06 57.8 45 51.1
Gohir.A10G175801 Gossypium hirsutum HOM05D001092 ORTHO05D000923 2.0e-06 57.4 49 53.1
Zm00001eb203090 Zea mays HOM05D001092 ORTHO05D000923 2.0e-06 57.4 49 44.9
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.4e-06 56.6 66 34.8
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 3.4e-06 56.6 52 46.2


User provided reference genes

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