Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13206 Sequoiadendron giganteum HOM05D005319 ORTHO05D006632 1.6e-58 229.2 114 100.0
ATR1089G095 Amborella trichopoda HOM05D005319 ORTHO05D006632 4.8e-10 68.2 52 59.6
Hma1.2p1_0052F.1_g030050 Hydrangea macrophylla HOM05D005319 ORTHO05D006632 1.8e-09 66.2 76 47.4
Atru.chr6.211 Acer truncatum HOM05D005319 ORTHO05D006632 2.4e-09 65.9 76 47.4
ClCG11G000090 Citrullus lanatus HOM05D005319 ORTHO05D006632 2.0e-08 62.8 51 58.8
Cpa.g.sc173.4 Carica papaya HOM05D005319 ORTHO05D006632 2.6e-08 62.4 51 58.8
Manes.07G031200 Manihot esculenta HOM05D005319 ORTHO05D006632 3.4e-08 62.0 71 49.3
TWI59G0928 Tripterygium wilfordii HOM05D005319 ORTHO05D006632 3.4e-08 62.0 51 58.8
Cfa004432 Carpinus fangiana HOM05D005319 ORTHO05D006632 4.5e-08 61.6 51 56.9
Haze_09972 Corylus avellana HOM05D005319 ORTHO05D006632 4.5e-08 61.6 51 56.9
TAR628G0438 Trochodendron aralioides HOM05D005319 ORTHO05D006632 4.5e-08 61.6 51 58.8
Actinidia26200 Actinidia chinensis HOM05D005319 ORTHO05D006632 5.8e-08 61.2 51 56.9
Ciclev10000238m.g Citrus clementina HOM05D005319 ORTHO05D006632 5.8e-08 61.2 76 44.7
Mapoly0013s0201 Marchantia polymorpha HOM05D005319 ORTHO05D006632 7.6e-08 60.8 51 58.8
Sed0027556 Sechium edule HOM05D005319 ORTHO05D006632 7.6e-08 60.8 51 56.9
Actinidia01642 Actinidia chinensis HOM05D005319 ORTHO05D006632 9.9e-08 60.5 51 54.9
MELO3C022920.2 Cucumis melo HOM05D005319 ORTHO05D006632 9.9e-08 60.5 51 56.9
Nn5g27146 Nelumbo nucifera HOM05D005319 ORTHO05D006632 9.9e-08 60.5 76 43.4
CiPaw.05G159300 Carya illinoinensis HOM05D005319 ORTHO05D006632 1.7e-07 59.7 71 46.5
Pp3c2_22040 Physcomitrium patens HOM05D005319 ORTHO05D006632 1.7e-07 59.7 52 55.8
Rhsim05G0118000 Rhododendron simsii HOM05D005319 ORTHO05D006632 1.7e-07 59.7 51 54.9
CSS0030211 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 2.2e-07 59.3 50 58.0
CANSAT01G0698 Cannabis sativa HOM05D005319 ORTHO05D006632 2.2e-07 59.3 50 56.0
Carub.0007s1678 Capsella rubella HOM05D005319 ORTHO05D006632 2.2e-07 59.3 71 49.3
CsaV3_5G027480 Cucumis sativus L. HOM05D005319 ORTHO05D006632 2.9e-07 58.9 51 56.9
Lj5g0014697 Lotus japonicus HOM05D005319 ORTHO05D006632 2.9e-07 58.9 76 44.7
Nn4g24765 Nelumbo nucifera HOM05D005319 ORTHO05D006632 3.8e-07 58.5 76 43.4
Sabra01G0174900 Salix brachista HOM05D005319 ORTHO05D006632 4.9e-07 58.2 51 56.9
Solyc01g102970.3 Solanum lycopersicum HOM05D005319 ORTHO05D006632 4.9e-07 58.2 54 55.6
Sopen01g045380 Solanum pennellii HOM05D005319 ORTHO05D006632 4.9e-07 58.2 54 55.6
CSS0036760 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 6.4e-07 57.8 50 56.0
CAN.G855.58 Capsicum annuum HOM05D005319 ORTHO05D006632 6.4e-07 57.8 54 55.6
CARHR231700 Cardamine hirsuta HOM05D005319 ORTHO05D006632 6.4e-07 57.8 58 55.2
Nitab4.5_0005164g0040 Nicotiana tabacum HOM05D005319 ORTHO05D006632 6.4e-07 57.8 53 52.8
Potri.004G229732 Populus trichocarpa HOM05D005319 ORTHO05D006632 6.4e-07 57.8 51 58.8
PGR142G1786 Punica granatum HOM05D005319 ORTHO05D006632 6.4e-07 57.8 51 56.9
QL02p103594 Quercus lobata HOM05D005319 ORTHO05D006632 6.4e-07 57.8 51 58.8
EL10As26g24243 Beta vulgaris HOM05D005319 ORTHO05D006632 8.4e-07 57.4 77 41.6
Cc02_g23690 Coffea canephora HOM05D005319 ORTHO05D006632 8.4e-07 57.4 51 52.9
Dinv29683 Davidia involucrata HOM05D005319 ORTHO05D006632 8.4e-07 57.4 51 52.9
Glyma.16G000500 Glycine max HOM05D005319 ORTHO05D006632 8.4e-07 57.4 71 45.1
CDE07G1780 Ceratophyllum demersum HOM05D005319 ORTHO05D006632 1.1e-06 57.0 67 44.8
ECA247G0718 Erigeron canadensis HOM05D005319 ORTHO05D006632 1.1e-06 57.0 60 50.0
Nitab4.5_0003247g0020 Nicotiana tabacum HOM05D005319 ORTHO05D006632 1.1e-06 57.0 53 52.8
Thecc.06G020300 Theobroma cacao HOM05D005319 ORTHO05D006632 1.1e-06 57.0 51 56.9
vmacro19823 Vaccinium macrocarpon HOM05D005319 ORTHO05D006632 1.1e-06 57.0 57 49.1
A01p15600 Brassica napus HOM05D005319 ORTHO05D006632 1.4e-06 56.6 71 45.1
BraA01t01501Z Brassica rapa HOM05D005319 ORTHO05D006632 1.4e-06 56.6 71 45.1
Lalb_Chr18g0061161 Lupinus albus HOM05D005319 ORTHO05D006632 1.9e-06 56.2 71 43.7
Peaxi162Scf00011g02012 Petunia axillaris HOM05D005319 ORTHO05D006632 1.9e-06 56.2 54 53.7
AT4G24270 Arabidopsis thaliana HOM05D005319 ORTHO05D006632 2.4e-06 55.8 58 53.4
C01p19580 Brassica napus HOM05D005319 ORTHO05D006632 2.4e-06 55.8 60 50.0
COL.COLO4_31114 Corchorus olitorius HOM05D005319 ORTHO05D006632 2.4e-06 55.8 51 54.9
Medtr8g015930 Medicago truncatula HOM05D005319 ORTHO05D006632 2.4e-06 55.8 71 43.7
PSO017G2844 Papaver somniferum HOM05D005319 ORTHO05D006632 2.4e-06 55.8 51 51.0
VMungo1127G0564 Vigna mungo HOM05D005319 ORTHO05D006632 2.4e-06 55.8 71 43.7
Aa31LG7G10320 Aethionema arabicum HOM05D005319 ORTHO05D006632 3.2e-06 55.5 50 54.0
SGA_v2.0_scaffold254G45232 Striga asiatica HOM05D005319 ORTHO05D006632 3.2e-06 55.5 51 51.0
arahy.Tifrunner.gnm1.ann1.2TW5YI Arachis hypogaea HOM05D005319 ORTHO05D006632 4.2e-06 55.1 52 51.9
Sp7g22260 Schrenkiella parvula HOM05D005319 ORTHO05D006632 4.2e-06 55.1 71 42.3
Sc12g0006940 Simmondsia chinensis HOM05D005319 ORTHO05D006632 4.2e-06 55.1 50 56.0
BcaC09g50887 Brassica carinata HOM05D005319 ORTHO05D006632 5.5e-06 54.7 60 48.3
BolC1t01883H Brassica oleracea HOM05D005319 ORTHO05D006632 5.5e-06 54.7 60 48.3
DCAR_003273 Daucus carota HOM05D005319 ORTHO05D006632 5.5e-06 54.7 51 56.9
PSO170G3892 Papaver somniferum HOM05D005319 ORTHO05D006632 5.5e-06 54.7 51 49.0
Aqoxy6G00019 Aquilegia oxysepala HOM05D005319 ORTHO05D006632 7.1e-06 54.3 76 43.4
AL7G28980 Arabidopsis lyrata HOM05D005319 ORTHO05D006632 7.1e-06 54.3 71 42.3
Thhalv10024416m.g Eutrema salsugineum HOM05D005319 ORTHO05D006632 7.1e-06 54.3 51 52.9
Glyma.12G164200 Glycine max HOM05D005319 ORTHO05D006632 7.1e-06 54.3 71 43.7
Gohir.A10G157900 Gossypium hirsutum HOM05D005319 ORTHO05D006632 9.3e-06 53.9 50 54.0
Lsat_1_v5_gn_9_125320 Lactuca sativa HOM05D005319 ORTHO05D006632 9.3e-06 53.9 47 55.3


User provided reference genes

Program Settings