Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13080 Sequoiadendron giganteum HOM05D026866 ORTHO05D005197 6.7e-148 527.3 267 100.0
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 1.5e-59 233.8 157 82.8
SEGI_18621 Sequoiadendron giganteum HOM05D026866 ORTHO05D000022 1.7e-29 134.0 86 74.4
SEGI_40043 Sequoiadendron giganteum HOM05D000121 ORTHO05D001726 4.7e-24 115.9 76 73.7
SEGI_28042 Sequoiadendron giganteum HOM05D000993 ORTHO05D001518 1.7e-21 107.5 106 54.7
SEGI_17251 Sequoiadendron giganteum HOM05D026866 ORTHO05D000022 1.2e-19 101.3 86 57.0
SEGI_15818 Sequoiadendron giganteum HOM05D026866 ORTHO05D000022 3.5e-19 99.8 70 64.3
SEGI_33025 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.9e-18 96.7 86 52.3
SEGI_21248 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 5.2e-15 85.9 95 46.3
SEGI_01578 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 1.5e-14 84.3 81 53.1
SEGI_18589 Sequoiadendron giganteum HOM05D022031 ORTHO05D000022 9.8e-14 81.6 93 46.2
SEGI_19006 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 2.8e-13 80.1 99 45.5
SEGI_23115 Sequoiadendron giganteum HOM05D000198 ORTHO05D000763 3.7e-13 79.7 98 46.9
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 4.8e-13 79.3 143 40.6
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 2.2e-10 70.5 85 49.4
SEGI_37545 Sequoiadendron giganteum HOM05D000172 ORTHO05D000781 6.5e-10 68.9 57 61.4
SEGI_19768 Sequoiadendron giganteum HOM05D001682 ORTHO05D001625 1.1e-09 68.2 44 70.5
SEGI_39811 Sequoiadendron giganteum HOM05D000059 ORTHO05D018912 3.2e-09 66.6 45 60.0
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 2.7e-08 63.5 56 60.7
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 3.6e-08 63.2 59 61.0
SEGI_10930 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 3.6e-08 63.2 44 65.9
SEGI_28166 Sequoiadendron giganteum HOM05D000288 ORTHO05D000173 8.0e-08 62.0 44 63.6
SEGI_30746 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 2.3e-07 60.5 39 71.8
SEGI_19465 Sequoiadendron giganteum HOM05D000037 ORTHO05D000608 3.0e-07 60.1 39 66.7
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 5.2e-07 59.3 73 49.3
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 8.8e-07 58.5 50 62.0
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.2e-06 58.2 53 58.5
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 2.0e-06 57.4 74 50.0
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 3.4e-06 56.6 44 65.9
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 3.4e-06 56.6 60 56.7
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 4.4e-06 56.2 44 65.9
MBI15_g38797_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.7e-06 55.8 59 45.8
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 5.7e-06 55.8 51 58.8
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 7.5e-06 55.5 43 62.8
MBI16_g11026_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.5e-06 55.5 53 49.1
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 7.5e-06 55.5 74 50.0
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 9.8e-06 55.1 46 63.0
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 9.8e-06 55.1 50 58.0
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 9.8e-06 55.1 50 58.0


User provided reference genes

Program Settings