Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12796 Sequoiadendron giganteum HOM05D002366 ORTHO05D002499 1.5e-84 316.2 173 100.0
Dinv15677 Davidia involucrata HOM05D002366 ORTHO05D002499 1.9e-10 70.1 155 33.5
BcaC02g12081 Brassica carinata HOM05D002366 ORTHO05D002499 4.2e-10 68.9 162 29.0
C04p08120 Brassica napus HOM05D002366 ORTHO05D002499 4.2e-10 68.9 164 29.3
BolC4t22422H Brassica oleracea HOM05D002366 ORTHO05D002499 4.2e-10 68.9 164 29.3
Thhalv10017310m.g Eutrema salsugineum HOM05D002366 ORTHO05D002499 5.5e-10 68.6 167 27.5
MBI13_g21678_MAGBIO Magnolia biondii HOM05D002366 ORTHO05D002499 7.2e-10 68.2 171 32.2
TWI74G0850 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 1.2e-09 67.4 168 32.1
Nitab4.5_0004454g0030 Nicotiana tabacum HOM05D002366 ORTHO05D002499 1.6e-09 67.0 165 32.1
Solyc03g098090.2 Solanum lycopersicum HOM05D002366 ORTHO05D002499 1.6e-09 67.0 169 32.5
Sopen03g028790 Solanum pennellii HOM05D002366 ORTHO05D002499 1.6e-09 67.0 169 32.5
AL4G36950 Arabidopsis lyrata HOM05D002366 ORTHO05D002499 2.1e-09 66.6 161 29.8
BcaB02g09112 Brassica carinata HOM05D002366 ORTHO05D002499 2.1e-09 66.6 167 28.1
Atru.chr11.990 Acer truncatum HOM05D002366 ORTHO05D002499 2.7e-09 66.2 165 30.9
Peaxi162Scf00171g00734 Petunia axillaris HOM05D002366 ORTHO05D002499 2.7e-09 66.2 168 32.7
PGR083G2740 Punica granatum HOM05D002366 ORTHO05D002499 2.7e-09 66.2 165 31.5
Manes.17G090200 Manihot esculenta HOM05D002366 ORTHO05D002499 3.6e-09 65.9 172 32.0
PGSC0003DMG400037321 Solanum tuberosum HOM05D002366 ORTHO05D002499 4.7e-09 65.5 161 32.9
C04p67410 Brassica napus HOM05D002366 ORTHO05D002499 6.1e-09 65.1 161 29.8
BolC4t28239H Brassica oleracea HOM05D002366 ORTHO05D002499 6.1e-09 65.1 161 29.8
Nitab4.5_0025009g0010 Nicotiana tabacum HOM05D002366 ORTHO05D002499 6.1e-09 65.1 165 32.1
BcaB06g29094 Brassica carinata HOM05D002366 ORTHO05D002499 8.0e-09 64.7 162 28.4
Aqoxy3G04031 Aquilegia oxysepala HOM05D002366 ORTHO05D002499 1.8e-08 63.5 166 28.9
Dinv20495 Davidia involucrata HOM05D002366 ORTHO05D002499 1.8e-08 63.5 188 29.8
THA.LOC104810173 Tarenaya hassleriana HOM05D002366 ORTHO05D002499 1.8e-08 63.5 165 27.9
AT2G39518 Arabidopsis thaliana HOM05D002366 ORTHO05D002499 2.3e-08 63.2 162 26.5
Sed0024270 Sechium edule HOM05D002366 ORTHO05D002499 2.3e-08 63.2 166 32.5
Solyc06g072350.3 Solanum lycopersicum HOM05D002366 ORTHO05D002499 2.3e-08 63.2 169 30.8
A04p30410 Brassica napus HOM05D002366 ORTHO05D002499 3.0e-08 62.8 156 29.5
CARHR134410 Cardamine hirsuta HOM05D002366 ORTHO05D002499 4.0e-08 62.4 162 27.2
Sp4g21820 Schrenkiella parvula HOM05D002366 ORTHO05D002499 4.0e-08 62.4 162 28.4
BcaC02g07399 Brassica carinata HOM05D002366 ORTHO05D002499 5.2e-08 62.0 167 30.5
C04p67400 Brassica napus HOM05D002366 ORTHO05D002499 5.2e-08 62.0 165 30.9
Thhalv10017305m.g Eutrema salsugineum HOM05D002366 ORTHO05D002499 5.2e-08 62.0 161 29.2
Peaxi162Scf00171g00733 Petunia axillaris HOM05D002366 ORTHO05D002499 5.2e-08 62.0 165 29.1
TWI38G1308 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 6.8e-08 61.6 128 36.7
BcaC02g07395 Brassica carinata HOM05D002366 ORTHO05D002499 8.8e-08 61.2 161 28.6
Sp4g21830 Schrenkiella parvula HOM05D002366 ORTHO05D002499 1.2e-07 60.8 161 28.6
A04p30420 Brassica napus HOM05D002366 ORTHO05D002499 1.5e-07 60.5 164 26.8
BolC4t28238H Brassica oleracea HOM05D002366 ORTHO05D002499 1.5e-07 60.5 162 27.8
BraA04t18467Z Brassica rapa HOM05D002366 ORTHO05D002499 1.5e-07 60.5 164 26.8
Dinv20547 Davidia involucrata HOM05D002366 ORTHO05D002499 1.5e-07 60.5 199 28.1
AL4G36940 Arabidopsis lyrata HOM05D002366 ORTHO05D002499 2.0e-07 60.1 162 25.9
AT2G39530 Arabidopsis thaliana HOM05D002366 ORTHO05D002499 2.0e-07 60.1 147 29.9
CSS0010618 Camellia sinensis var. sinensis HOM05D002366 ORTHO05D002499 2.0e-07 60.1 163 28.8
SalBow6G6394 Salvia bowleyana HOM05D002366 ORTHO05D002499 2.0e-07 60.1 164 31.1
SalBow6G6566 Salvia bowleyana HOM05D002366 ORTHO05D002499 2.0e-07 60.1 164 29.9
BcaC02g07396 Brassica carinata HOM05D002366 ORTHO05D002499 2.6e-07 59.7 141 28.4
Carub.0004s2160 Capsella rubella HOM05D002366 ORTHO05D002499 2.6e-07 59.7 156 26.3
Aa31LG5G20080 Aethionema arabicum HOM05D002366 ORTHO05D002499 3.4e-07 59.3 162 26.5
Glyma.18G289800 Glycine max HOM05D002366 ORTHO05D002499 3.4e-07 59.3 166 28.3
GSVIVG01016540001 Vitis vinifera HOM05D002366 ORTHO05D002499 3.4e-07 59.3 163 28.8
A05p06860 Brassica napus HOM05D002366 ORTHO05D002499 4.4e-07 58.9 162 27.8
BraA05t19651Z Brassica rapa HOM05D002366 ORTHO05D002499 4.4e-07 58.9 162 27.8
MELO3C001930.2 Cucumis melo HOM05D002366 ORTHO05D002499 5.7e-07 58.5 178 29.8
ECA232G1962 Erigeron canadensis HOM05D000340 ORTHO05D000821 5.7e-07 58.5 109 34.9
GSVIVG01016541001 Vitis vinifera HOM05D002366 ORTHO05D002499 5.7e-07 58.5 164 30.5
Cpa.g.sc361.1 Carica papaya HOM05D002366 ORTHO05D002499 9.8e-07 57.8 117 34.2
ClCG04G012730 Citrullus lanatus HOM05D002366 ORTHO05D002499 9.8e-07 57.8 165 31.5
RcHm_v2.0_Chr7g0177721 Rosa chinensis HOM05D002366 ORTHO05D002499 9.8e-07 57.8 172 29.7
Sc06g0002620 Simmondsia chinensis HOM05D002366 ORTHO05D002499 9.8e-07 57.8 147 26.5
Thecc.10G043700 Theobroma cacao HOM05D002366 ORTHO05D002499 9.8e-07 57.8 172 29.1
Actinidia28014 Actinidia chinensis HOM05D002366 ORTHO05D002499 1.3e-06 57.4 155 29.0
Carub.0004s2161 Capsella rubella HOM05D002366 ORTHO05D002499 1.3e-06 57.4 144 28.5
SalBow3G2180 Salvia bowleyana HOM05D002366 ORTHO05D002499 1.3e-06 57.4 164 29.9
BcaB06g29095 Brassica carinata HOM05D002366 ORTHO05D002499 1.7e-06 57.0 162 30.2
Lalb_Chr10g0091701 Lupinus albus HOM05D002366 ORTHO05D002499 1.7e-06 57.0 159 26.4
Potri.010G204700 Populus trichocarpa HOM05D002366 ORTHO05D002499 1.7e-06 57.0 160 31.2
Lsat_1_v5_gn_8_34180 Lactuca sativa HOM05D002366 ORTHO05D002499 2.2e-06 56.6 176 31.8
Duzib205G0226 Durio zibethinus HOM05D002366 ORTHO05D002499 2.8e-06 56.2 161 32.9
Glyma.02G092600 Glycine max HOM05D002366 ORTHO05D002499 2.8e-06 56.2 168 26.8
Prupe.5G239200 Prunus persica HOM05D002366 ORTHO05D002499 2.8e-06 56.2 170 28.8
Duzib114G1053 Durio zibethinus HOM05D002366 ORTHO05D002499 3.7e-06 55.8 165 30.3
Lalb_Chr17g0336171 Lupinus albus HOM05D002366 ORTHO05D002499 3.7e-06 55.8 161 27.3
Sopen06g028720 Solanum pennellii HOM05D002366 ORTHO05D002499 3.7e-06 55.8 185 28.1
Gorai.011G257400 Gossypium raimondii HOM05D002366 ORTHO05D002499 4.9e-06 55.5 166 29.5
TAR629G0597 Trochodendron aralioides HOM05D002366 ORTHO05D002499 4.9e-06 55.5 105 35.2
Gohir.A10G217500 Gossypium hirsutum HOM05D002366 ORTHO05D002499 6.3e-06 55.1 178 28.7
Glyma.02G092500 Glycine max HOM05D002366 ORTHO05D002499 8.3e-06 54.7 161 28.6


User provided reference genes

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