Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12780 Sequoiadendron giganteum HOM05D001068 ORTHO05D025923 1.9e-80 302.4 144 100.0
HanXRQChr16g0501091 Helianthus annuus HOM05D001068 ORTHO05D003875 1.6e-31 139.8 97 68.0
HanXRQChr08g0227741 Helianthus annuus HOM05D001068 ORTHO05D003875 3.1e-30 135.6 97 67.0
Lsat_1_v5_gn_6_18061 Lactuca sativa HOM05D001068 ORTHO05D003875 5.2e-30 134.8 97 64.9
ECA233G2258 Erigeron canadensis HOM05D001068 ORTHO05D003875 1.2e-29 133.7 97 63.9
Prupe.5G065100 Prunus persica HOM05D001068 ORTHO05D003875 1.5e-29 133.3 89 68.5
CiPaw.11G081900 Carya illinoinensis HOM05D001068 ORTHO05D003875 3.4e-29 132.1 89 69.7
Sopen08g026880 Solanum pennellii HOM05D001068 ORTHO05D003875 4.4e-29 131.7 89 62.9
CAN.G1178.15 Capsicum annuum HOM05D001068 ORTHO05D003875 5.8e-29 131.3 89 64.0
Sed0012317 Sechium edule HOM05D001068 ORTHO05D003875 5.8e-29 131.3 89 67.4
Zm00001eb379490 Zea mays HOM05D001068 ORTHO05D003875 5.8e-29 131.3 97 62.9
QL12p011360 Quercus lobata HOM05D001068 ORTHO05D003875 7.6e-29 131.0 89 67.4
CiPaw.12G050100 Carya illinoinensis HOM05D001068 ORTHO05D003875 9.9e-29 130.6 89 68.5
Hma1.2p1_1136F.1_g260540 Hydrangea macrophylla HOM05D001068 ORTHO05D003875 9.9e-29 130.6 89 67.4
Sabra03G0049400 Salix brachista HOM05D001068 ORTHO05D003875 9.9e-29 130.6 89 67.4
Ciclev10019196m.g Citrus clementina HOM05D001068 ORTHO05D003875 1.3e-28 130.2 89 67.4
ECA233G3500 Erigeron canadensis HOM05D001068 ORTHO05D003875 1.3e-28 130.2 88 68.2
Lalb_Chr05g0214351 Lupinus albus HOM05D001068 ORTHO05D003875 1.3e-28 130.2 89 65.2
MD04G1060500 Malus domestica HOM05D001068 ORTHO05D003875 1.7e-28 129.8 89 65.2
Potri.003G079200 Populus trichocarpa HOM05D001068 ORTHO05D003875 1.7e-28 129.8 89 67.4
RcHm_v2.0_Chr7g0204041 Rosa chinensis HOM05D001068 ORTHO05D003875 1.7e-28 129.8 89 66.3
Lalb_Chr05g0221141 Lupinus albus HOM05D001068 ORTHO05D003875 2.2e-28 129.4 89 66.3
Glyma.01G207500 Glycine max HOM05D001068 ORTHO05D003875 2.9e-28 129.0 89 66.3
Glyma.11G035200 Glycine max HOM05D001068 ORTHO05D003875 2.9e-28 129.0 89 66.3
Atru.chr9.1272 Acer truncatum HOM05D001068 ORTHO05D003875 3.8e-28 128.6 89 67.4
Glyma.05G062200 Glycine max HOM05D001068 ORTHO05D003875 3.8e-28 128.6 89 67.4
CARHR129930 Cardamine hirsuta HOM05D001068 ORTHO05D003875 6.4e-28 127.9 97 63.9
CDE02G3830 Ceratophyllum demersum HOM05D001068 ORTHO05D003875 6.4e-28 127.9 89 65.2
unitig_8.g3019 Utricularia gibba HOM05D001068 ORTHO05D003875 6.4e-28 127.9 93 59.1
Migut.A01136 Erythranthe guttata HOM05D001068 ORTHO05D003875 8.4e-28 127.5 89 65.2
Nn6g33873 Nelumbo nucifera HOM05D001068 ORTHO05D003875 8.4e-28 127.5 89 66.3
Os06g0103500 Oryza sativa ssp. japonica HOM05D001068 ORTHO05D003875 8.4e-28 127.5 89 62.9
TWI15G0242 Tripterygium wilfordii HOM05D001068 ORTHO05D003875 8.4e-28 127.5 89 66.3
CANSAT21G1427 Cannabis sativa HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 64.0
Lj4g0020838 Lotus japonicus HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 65.2
Manes.01G083700 Manihot esculenta HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 66.3
Nitab4.5_0001381g0040 Nicotiana tabacum HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 61.8
Nitab4.5_0003050g0030 Nicotiana tabacum HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 61.8
Potri.001G155500 Populus trichocarpa HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 65.2
PGSC0003DMG400004828 Solanum tuberosum HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 61.8
TPR.G18124 Trifolium pratense HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 65.2
TPR.G18139 Trifolium pratense HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 65.2
VMungo1215G1615 Vigna mungo HOM05D001068 ORTHO05D003875 1.1e-27 127.1 89 62.9
MSTRG.12124 Avicennia marina HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 62.9
ClCG01G004240 Citrullus lanatus HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 65.2
DCAR_008508 Daucus carota HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 65.2
FvH4_5g19470 Fragaria vesca HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 65.2
FAN04G2918 Fragaria x ananassa HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 65.2
FAN08G3629 Fragaria x ananassa HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 65.2
FAN13G2133 Fragaria x ananassa HOM05D001068 ORTHO05D003875 1.4e-27 126.7 89 65.2
CsaV3_5G004440 Cucumis sativus L. HOM05D001068 ORTHO05D003875 1.9e-27 126.3 89 64.0
Eucgr.E00406 Eucalyptus grandis HOM05D001068 ORTHO05D003875 1.9e-27 126.3 89 65.2
Pp3c14_14860 Physcomitrium patens HOM05D001068 ORTHO05D003875 1.9e-27 126.3 98 58.2
arahy.Tifrunner.gnm1.ann1.I9A8PV Arachis hypogaea HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
arahy.Tifrunner.gnm1.ann1.ZPM9RR Arachis hypogaea HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
BcaC09g50411 Brassica carinata HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
A01p20470 Brassica napus HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
C01p25740 Brassica napus HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
BolC1t02524H Brassica oleracea HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
BraA01t01975Z Brassica rapa HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
Medtr4g100640 Medicago truncatula HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
Oeu040705.1 Olea europaea HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 62.9
Phvul.002G056700 Phaseolus vulgaris HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 61.8
Sabra01G0125000 Salix brachista HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
Sabra01G0125200 Salix brachista HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
PGSC0003DMG400004827 Solanum tuberosum HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 60.7
TAR629G1427 Trochodendron aralioides HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
VMungo0251G0971 Vigna mungo HOM05D001068 ORTHO05D003875 2.4e-27 125.9 89 65.2
MELO3C005515.2 Cucumis melo HOM05D001068 ORTHO05D003875 3.2e-27 125.6 89 64.0
Sc22g0001000 Simmondsia chinensis HOM05D001068 ORTHO05D003875 3.2e-27 125.6 97 61.9
AL4G31770 Arabidopsis lyrata HOM05D001068 ORTHO05D003875 4.1e-27 125.2 97 61.9
AT2G35690 Arabidopsis thaliana HOM05D001068 ORTHO05D003875 4.1e-27 125.2 97 61.9
FAN18G2254 Fragaria x ananassa HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 64.0
FAN18G3422 Fragaria x ananassa HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 64.0
FAN18G4353 Fragaria x ananassa HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 64.0
Hma1.2p1_0316F.1_g122820 Hydrangea macrophylla HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 64.0
Lalb_Chr09g0329981 Lupinus albus HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 66.3
Lalb_Chr16g0386611 Lupinus albus HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 65.2
PSO782G5462 Papaver somniferum HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 64.0
Sp7g17360 Schrenkiella parvula HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 65.2
THA.LOC104814467 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 65.2
TWI81G0453 Tripterygium wilfordii HOM05D001068 ORTHO05D003875 4.1e-27 125.2 89 66.3
arahy.Tifrunner.gnm1.ann1.MWEA9C Arachis hypogaea HOM05D001068 ORTHO05D003875 5.4e-27 124.8 89 62.9
arahy.Tifrunner.gnm1.ann1.QXG3RX Arachis hypogaea HOM05D001068 ORTHO05D003875 5.4e-27 124.8 89 62.9
BcaC01g05713 Brassica carinata HOM05D001068 ORTHO05D003875 5.4e-27 124.8 88 64.8
C03p22930 Brassica napus HOM05D001068 ORTHO05D003875 5.4e-27 124.8 88 64.8
BolC3t14694H Brassica oleracea HOM05D001068 ORTHO05D003875 5.4e-27 124.8 88 64.8
CARHR223330 Cardamine hirsuta HOM05D001068 ORTHO05D003875 5.4e-27 124.8 89 64.0
Cc08_g12140 Coffea canephora HOM05D001068 ORTHO05D003875 5.4e-27 124.8 97 61.9
Thhalv10016360m.g Eutrema salsugineum HOM05D001068 ORTHO05D003875 5.4e-27 124.8 89 65.2
Aa31LG2G12940 Aethionema arabicum HOM05D001068 ORTHO05D003875 7.1e-27 124.4 89 64.0
BcaB01g03886 Brassica carinata HOM05D001068 ORTHO05D003875 7.1e-27 124.4 89 62.9
Carub.0004s1742 Capsella rubella HOM05D001068 ORTHO05D003875 7.1e-27 124.4 97 61.9
Ca_24593_v3 Cicer arietinum L. HOM05D001068 ORTHO05D003875 7.1e-27 124.4 89 64.0
Thhalv10024621m.g Eutrema salsugineum HOM05D001068 ORTHO05D003875 7.1e-27 124.4 89 64.0
Manes.02G041600 Manihot esculenta HOM05D001068 ORTHO05D003875 7.1e-27 124.4 89 64.0
Phvul.003G222800 Phaseolus vulgaris HOM05D001068 ORTHO05D003875 7.1e-27 124.4 89 64.0
AL7G37930 Arabidopsis lyrata HOM05D001068 ORTHO05D003875 9.2e-27 124.0 89 62.9
BcaNung00152 Brassica carinata HOM05D001068 ORTHO05D003875 9.2e-27 124.0 89 64.0
Cfa012691 Carpinus fangiana HOM05D001068 ORTHO05D003875 9.2e-27 124.0 89 64.0
Gohir.D11G026600 Gossypium hirsutum HOM05D001068 ORTHO05D003875 9.2e-27 124.0 88 64.8
Thecc.03G247900 Theobroma cacao HOM05D001068 ORTHO05D003875 9.2e-27 124.0 89 64.0
Dinv21659 Davidia involucrata HOM05D001068 ORTHO05D003875 1.2e-26 123.6 89 64.0
Duzib205G0096 Durio zibethinus HOM05D001068 ORTHO05D003875 1.2e-26 123.6 88 63.6
Mapoly0169s0009 Marchantia polymorpha HOM05D001068 ORTHO05D003875 1.2e-26 123.6 89 58.4
Medtr5g012920 Medicago truncatula HOM05D001068 ORTHO05D003875 1.2e-26 123.6 89 62.9
PGR042G1327 Punica granatum HOM05D001068 ORTHO05D003875 1.2e-26 123.6 89 64.0
SMO358G0542 Selaginella moellendorffii HOM05D001068 ORTHO05D003875 1.2e-26 123.6 95 55.8
THA.LOC104815504 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 1.2e-26 123.6 89 65.2
Aqoxy3G02817 Aquilegia oxysepala HOM05D001068 ORTHO05D003875 1.6e-26 123.2 89 64.0
AT4G16760 Arabidopsis thaliana HOM05D001068 ORTHO05D003875 1.6e-26 123.2 89 60.7
AUR62007112 Chenopodium quinoa HOM05D001068 ORTHO05D003875 1.6e-26 123.2 89 64.0
Haze_07942 Corylus avellana HOM05D001068 ORTHO05D003875 1.6e-26 123.2 89 64.0
RcHm_v2.0_Chr3g0481221 Rosa chinensis HOM05D001068 ORTHO05D003875 1.6e-26 123.2 89 64.0
THA.LOC104812770 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 1.6e-26 123.2 89 62.9
Carub.0007s2462 Capsella rubella HOM05D001068 ORTHO05D003875 2.1e-26 122.9 89 62.9
DCAR_004991 Daucus carota HOM05D001068 ORTHO05D003875 2.1e-26 122.9 87 65.5
DCAR_027764 Daucus carota HOM05D001068 ORTHO05D003875 2.1e-26 122.9 87 64.4
Gorai.007G028900 Gossypium raimondii HOM05D001068 ORTHO05D003875 2.1e-26 122.9 88 64.8
Lj2g0000811 Lotus japonicus HOM05D001068 ORTHO05D003875 2.1e-26 122.9 89 62.9
Zm00001eb376020 Zea mays HOM05D001068 ORTHO05D003875 2.1e-26 122.9 89 61.8
Ah.12g054350 Amaranthus hybridus HOM05D001068 ORTHO05D003875 2.7e-26 122.5 89 62.9
A03p19670 Brassica napus HOM05D001068 ORTHO05D003875 2.7e-26 122.5 88 63.6
BraA03t11221Z Brassica rapa HOM05D001068 ORTHO05D003875 2.7e-26 122.5 88 63.6
CSS0004981 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 2.7e-26 122.5 89 64.0
SalBow6G3759 Salvia bowleyana HOM05D001068 ORTHO05D003875 2.7e-26 122.5 93 60.2
Ah.07g198830 Amaranthus hybridus HOM05D001068 ORTHO05D003875 4.6e-26 121.7 87 64.4
Gohir.A09G196500 Gossypium hirsutum HOM05D001068 ORTHO05D003875 4.6e-26 121.7 88 63.6
Gohir.A11G027400 Gossypium hirsutum HOM05D001068 ORTHO05D003875 4.6e-26 121.7 88 63.6
Gorai.006G213900 Gossypium raimondii HOM05D001068 ORTHO05D003875 4.6e-26 121.7 88 63.6
Sp4g17950 Schrenkiella parvula HOM05D001068 ORTHO05D003875 4.6e-26 121.7 88 62.5
AUR62019981 Chenopodium quinoa HOM05D001068 ORTHO05D003875 6.0e-26 121.3 89 62.9
Sed0021431 Sechium edule HOM05D001068 ORTHO05D003875 6.0e-26 121.3 89 60.7
Peaxi162Scf00214g00048 Petunia axillaris HOM05D001068 ORTHO05D003875 7.8e-26 120.9 89 58.4
RcHm_v2.0_Chr3g0481201 Rosa chinensis HOM05D001068 ORTHO05D003875 7.8e-26 120.9 89 64.0
Hund28547 Selenicereus undatus HOM05D001068 ORTHO05D003875 7.8e-26 120.9 89 62.9
Hund28548 Selenicereus undatus HOM05D001068 ORTHO05D003875 7.8e-26 120.9 89 62.9
CSS0023687 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 1.0e-25 120.6 88 62.5
Prupe.7G067100 Prunus persica HOM05D001068 ORTHO05D003875 1.0e-25 120.6 89 61.8
Sopen08g026890 Solanum pennellii HOM05D001068 ORTHO05D003875 1.0e-25 120.6 89 56.2
vmacro00007 Vaccinium macrocarpon HOM05D001068 ORTHO05D003875 1.0e-25 120.6 89 61.8
Psat2g176520 Pisum sativum HOM05D001068 ORTHO05D003875 1.3e-25 120.2 89 60.7
TPR.G37610 Trifolium pratense HOM05D001068 ORTHO05D003875 1.3e-25 120.2 89 61.8
Duzib068G1125 Durio zibethinus HOM05D001068 ORTHO05D003875 1.7e-25 119.8 88 63.6
Lalb_Chr05g0214331 Lupinus albus HOM05D001068 ORTHO05D003875 1.7e-25 119.8 89 59.6
Dinv39170 Davidia involucrata HOM05D001068 ORTHO05D003875 2.3e-25 119.4 89 61.8
EL10Ac5g12342 Beta vulgaris HOM05D001068 ORTHO05D003875 3.0e-25 119.0 89 60.7
Gohir.D09G191100 Gossypium hirsutum HOM05D001068 ORTHO05D003875 3.0e-25 119.0 87 63.2
MD13G1127300 Malus domestica HOM05D001068 ORTHO05D003875 3.0e-25 119.0 89 60.7
Hund14578 Selenicereus undatus HOM05D001068 ORTHO05D003875 3.0e-25 119.0 89 62.9
HPP92_022429 Vanilla planifolia HOM05D001068 ORTHO05D003875 3.0e-25 119.0 89 59.6
Cpa.g.sc89.71 Carica papaya HOM05D001068 ORTHO05D003875 3.9e-25 118.6 89 59.6
COL.COLO4_37120 Corchorus olitorius HOM05D001068 ORTHO05D003875 5.1e-25 118.2 89 57.3
Rhsim11G0003700 Rhododendron simsii HOM05D001068 ORTHO05D003875 5.1e-25 118.2 89 59.6
SHI09349 Sapria himalayana HOM05D001068 ORTHO05D003875 8.7e-25 117.5 89 60.7
Lj8A269T38 Lonicera japonica HOM05D001068 ORTHO05D003875 1.1e-24 117.1 89 59.6
Duzib084G1186 Durio zibethinus HOM05D001068 ORTHO05D003875 1.9e-24 116.3 88 60.2
Gohir.A12G215400 Gossypium hirsutum HOM05D001068 ORTHO05D003875 3.3e-24 115.5 88 60.2
Gohir.D12G218000 Gossypium hirsutum HOM05D001068 ORTHO05D003875 7.3e-24 114.4 88 60.2
Gorai.008G233600 Gossypium raimondii HOM05D001068 ORTHO05D003875 7.3e-24 114.4 88 60.2
THA.LOC104806669 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 1.2e-23 113.6 90 57.8
Ca_21988_v3 Cicer arietinum L. HOM05D001068 ORTHO05D003875 1.6e-23 113.2 86 61.6
ATR0057G009 Amborella trichopoda HOM05D001068 ORTHO05D003875 2.1e-23 112.8 89 56.2
CBR_g30062 Chara braunii HOM05D001068 ORTHO05D003875 3.1e-22 109.0 89 51.7
FAN02G0755 Fragaria x ananassa HOM05D001068 ORTHO05D003875 9.9e-21 104.0 92 54.3
Nitab4.5_0006065g0010 Nicotiana tabacum HOM05D001068 ORTHO05D025923 1.0e-17 94.0 87 50.6
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.4e-14 82.8 70 61.4
MCO09G755 Micromonas commoda HOM05D001068 ORTHO05D003875 3.2e-11 72.4 82 41.5
CSS0035524 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 4.2e-11 72.0 89 46.1
TPR.G22740 Trifolium pratense HOM05D001068 ORTHO05D025923 4.2e-11 72.0 55 61.8
SEGI_41016 Sequoiadendron giganteum HOM05D004933 ORTHO05D005465 1.3e-09 67.0 58 58.6
SEGI_37505 Sequoiadendron giganteum HOM05D006648 ORTHO05D025756 3.9e-09 65.5 64 54.7
Cre16.g689050 Chlamydomonas reinhardtii HOM05D001068 ORTHO05D003875 6.7e-09 64.7 84 39.3
Solyc08g078400.3 Solanum lycopersicum HOM05D001068 ORTHO05D003875 7.4e-08 61.2 89 38.2


User provided reference genes

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