Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12162 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.4e-164 582.8 280 100.0
TAR636G1846 Trochodendron aralioides HOM05D002270 ORTHO05D002866 5.0e-77 292.0 280 48.2
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 8.5e-77 291.2 280 46.4
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 7.2e-76 288.1 280 48.2
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 9.4e-76 287.7 267 51.3
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 9.4e-76 287.7 280 48.6
Cpa.g.sc30.10 Carica papaya HOM05D002270 ORTHO05D002866 1.2e-75 287.3 264 50.0
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 1.2e-75 287.3 277 48.7
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.6e-75 287.0 280 48.6
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 8.0e-75 284.6 280 47.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 8.8e-74 281.2 276 47.5
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.1e-73 280.8 280 47.9
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.1e-73 280.8 265 49.4
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 1.1e-73 280.8 286 47.6
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.5e-73 280.4 286 49.7
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 3.3e-73 279.3 261 50.6
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 4.4e-73 278.9 261 50.6
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 5.7e-73 278.5 261 50.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 2.8e-72 276.2 270 50.4
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 4.8e-72 275.4 274 46.7
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 4.8e-72 275.4 267 49.1
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 8.2e-72 274.6 261 48.7
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 8.2e-72 274.6 261 48.7
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.1e-71 274.2 280 47.1
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 1.1e-71 274.2 265 50.2
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.4e-71 273.9 265 50.9
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 1.8e-71 273.5 281 47.3
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 2.4e-71 273.1 280 46.8
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 3.1e-71 272.7 280 46.8
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 3.1e-71 272.7 263 50.6
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 3.1e-71 272.7 275 47.6
vmacro22217 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 3.1e-71 272.7 276 47.1
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 4.1e-71 272.3 261 49.0
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 4.1e-71 272.3 275 47.6
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 4.1e-71 272.3 263 51.3
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 5.3e-71 271.9 265 49.1
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 5.3e-71 271.9 261 48.3
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 9.1e-71 271.2 262 48.9
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.2e-70 270.8 284 46.5
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.2e-70 270.8 280 46.8
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 1.2e-70 270.8 267 49.8
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 1.6e-70 270.4 280 46.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 2.0e-70 270.0 263 50.6
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 2.0e-70 270.0 275 47.3
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 2.6e-70 269.6 277 47.3
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 3.5e-70 269.2 263 50.2
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 3.5e-70 269.2 261 49.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 5.9e-70 268.5 267 49.4
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 7.7e-70 268.1 277 46.6
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.3e-69 267.3 282 47.2
COL.COLO4_12568 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.7e-69 266.9 262 48.1
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.7e-69 266.9 277 46.6
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 2.2e-69 266.5 275 47.3
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 3.8e-69 265.8 277 46.6
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 6.5e-69 265.0 278 46.8
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 8.5e-69 264.6 263 49.0
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 8.5e-69 264.6 282 46.8
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 8.5e-69 264.6 278 46.4
TPR.G29949 Trifolium pratense HOM05D002270 ORTHO05D002866 1.1e-68 264.2 268 49.3
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 1.5e-68 263.8 265 50.2
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.5e-68 263.8 259 49.4
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.5e-68 263.1 258 49.6
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.2e-68 262.7 264 48.5
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.2e-68 262.3 264 48.1
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 5.5e-68 261.9 264 47.7
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 5.5e-68 261.9 264 47.7
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 7.2e-68 261.5 269 47.6
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 9.4e-68 261.2 257 49.0
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.2e-67 260.8 267 47.6
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.6e-67 260.4 261 48.3
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.6e-67 260.4 261 48.3
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 2.1e-67 260.0 269 47.2
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 2.7e-67 259.6 267 47.2
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.7e-67 259.6 259 48.6
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 3.6e-67 259.2 284 46.1
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 4.7e-67 258.8 264 47.3
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 4.7e-67 258.8 266 47.7
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 6.1e-67 258.5 298 42.6
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.8e-66 256.9 300 43.7
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 1.8e-66 256.9 267 47.9
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 8.8e-66 254.6 259 47.9
VMungo0331G1298 Vigna mungo HOM05D002270 ORTHO05D002866 8.8e-66 254.6 273 47.3
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 2.0e-65 253.4 282 46.1
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.0e-65 253.4 298 41.9
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 9.8e-65 251.1 261 45.2
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 2.2e-64 250.0 257 47.1
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 8.3e-64 248.1 261 46.4
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 8.3e-64 248.1 261 48.7
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 2.4e-63 246.5 278 45.0
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 1.2e-62 244.2 279 45.5
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.2e-62 244.2 273 44.7
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 2.7e-62 243.0 258 46.1
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 5.9e-62 241.9 282 44.3
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 1.3e-61 240.7 261 46.4
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.7e-61 240.4 279 44.8
SHI16816 Sapria himalayana HOM05D002270 ORTHO05D002866 1.7e-61 240.4 274 43.4
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 2.2e-61 240.0 280 40.7
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 2.2e-61 240.0 277 44.8
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 5.0e-61 238.8 261 47.5
VMungo0464G0518 Vigna mungo HOM05D002270 ORTHO05D002866 1.9e-60 236.9 270 45.6
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 9.4e-60 234.6 258 46.9
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 1.4e-58 230.7 270 45.6
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 2.3e-58 229.9 264 42.0
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 3.3e-52 209.5 273 39.9
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 5.7e-49 198.7 232 45.3
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 7.3e-44 181.8 163 52.1
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 2.7e-30 136.7 202 37.6
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 3.9e-29 132.9 205 38.5
TAR371G0164 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.3e-24 117.9 82 68.3
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 2.1e-22 110.5 278 28.8
TAR371G0515 Trochodendron aralioides HOM05D002270 ORTHO05D002866 5.8e-17 92.4 133 36.1
Cre02.g095550 Chlamydomonas reinhardtii HOM05D053512 ORTHO05D012763 7.3e-12 75.5 164 33.5
Cre02.g095250 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 2.1e-11 73.9 97 43.3
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 2.4e-10 70.5 140 31.4
ATR0736G169 Amborella trichopoda HOM05D002270 ORTHO05D002866 3.1e-10 70.1 118 36.4
MCO14G508 Micromonas commoda HOM05D002270 ORTHO05D002866 4.0e-10 69.7 104 39.4
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 9.0e-10 68.6 95 38.9
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.5e-09 67.8 163 27.6
C02p22530 Brassica napus HOM05D002270 ORTHO05D002866 5.8e-09 65.9 163 29.4
BolC2t08407H Brassica oleracea HOM05D002270 ORTHO05D002866 5.8e-09 65.9 163 29.4
SMO141G0091 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 1.3e-08 64.7 110 33.6
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.7e-08 64.3 163 28.2
Lalb_Chr20g0113901 Lupinus albus HOM05D002270 ORTHO05D002866 6.4e-08 62.4 110 31.8
SEGI_27232 Sequoiadendron giganteum HOM05D002270 ORTHO05D000001 6.4e-08 62.4 165 29.1
VMungo1383G2297 Vigna mungo HOM05D002270 ORTHO05D002866 8.4e-08 62.0 110 33.6
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.4e-07 61.2 95 33.7
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.9e-07 60.8 163 28.2
SHI16813 Sapria himalayana HOM05D002270 ORTHO05D002866 4.2e-07 59.7 164 27.4
arahy.Tifrunner.gnm1.ann1.I4EX6M Arachis hypogaea HOM05D002270 ORTHO05D002866 5.4e-07 59.3 96 33.3
C02p22540 Brassica napus HOM05D002270 ORTHO05D002866 1.6e-06 57.8 101 34.7
BolC2t08408H Brassica oleracea HOM05D002270 ORTHO05D002866 1.6e-06 57.8 101 34.7
Cpa.g.sc30.11 Carica papaya HOM05D002270 ORTHO05D002866 2.1e-06 57.4 165 27.3
Nitab4.5_0003025g0040 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.7e-06 57.0 74 39.2
Sp5g22060 Schrenkiella parvula HOM05D002270 ORTHO05D002866 2.7e-06 57.0 74 41.9
Cpa.g.sc30.12 Carica papaya HOM05D002270 ORTHO05D002866 3.5e-06 56.6 96 32.3
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 4.6e-06 56.2 100 34.0
SEGI_24765 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 6.0e-06 55.8 81 39.5


User provided reference genes

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