Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12002 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 3.1e-69 265.0 131 100.0
SEGI_20214 Sequoiadendron giganteum HOM05D003289 ORTHO05D000003 3.1e-37 158.7 84 94.0
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 3.6e-30 135.2 84 83.3
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 6.5e-19 97.8 83 60.2
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 2.7e-17 92.4 83 55.4
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 1.3e-16 90.1 78 56.4
Os02g0511901 Oryza sativa ssp. japonica HOM05D003289 ORTHO05D004594 8.7e-16 87.4 83 49.4
ATR0820G074 Amborella trichopoda HOM05D003289 ORTHO05D004594 1.9e-15 86.3 80 51.2
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 2.5e-15 85.9 78 51.3
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 5.7e-15 84.7 78 51.3
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 7.4e-15 84.3 77 54.5
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 7.4e-15 84.3 84 51.2
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 7.4e-15 84.3 84 51.2
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 7.4e-15 84.3 83 51.8
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 1.6e-14 83.2 78 53.8
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 1.6e-14 83.2 78 53.8
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 1.6e-14 83.2 83 50.6
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 3.7e-14 82.0 78 51.3
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 4.8e-14 81.6 73 53.4
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 4.8e-14 81.6 78 50.0
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 4.8e-14 81.6 78 50.0
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 4.8e-14 81.6 78 48.7
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 6.3e-14 81.3 77 50.6
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 6.3e-14 81.3 78 50.0
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 1.1e-13 80.5 78 48.7
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 1.1e-13 80.5 78 47.4
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.4e-13 80.1 78 48.7
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 1.4e-13 80.1 83 43.4
Psat7g153200 Pisum sativum HOM05D003289 ORTHO05D004594 1.4e-13 80.1 83 45.8
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 1.8e-13 79.7 83 48.2
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 1.8e-13 79.7 83 45.8
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 1.8e-13 79.7 78 48.7
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 2.4e-13 79.3 78 52.6
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 3.1e-13 79.0 78 47.4
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 4.1e-13 78.6 83 45.8
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 4.1e-13 78.6 78 47.4
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 4.1e-13 78.6 78 48.7
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 4.1e-13 78.6 83 43.4
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 5.3e-13 78.2 78 46.2
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 6.9e-13 77.8 83 48.2
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 6.9e-13 77.8 78 51.3
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 6.9e-13 77.8 81 46.9
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 9.0e-13 77.4 78 47.4
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 9.0e-13 77.4 90 43.3
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 1.2e-12 77.0 78 47.4
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 1.5e-12 76.6 78 43.6
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 1.5e-12 76.6 78 43.6
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 1.5e-12 76.6 78 43.6
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 2.0e-12 76.3 83 47.0
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 2.0e-12 76.3 115 37.4
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 2.0e-12 76.3 82 47.6
CAN.G1177.9 Capsicum annuum HOM05D003289 ORTHO05D004594 2.6e-12 75.9 71 50.7
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 2.6e-12 75.9 80 48.8
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 3.4e-12 75.5 83 43.4
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 3.4e-12 75.5 84 40.5
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 4.5e-12 75.1 83 43.4
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 5.9e-12 74.7 87 43.7
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 1.0e-11 73.9 89 38.2
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 1.7e-11 73.2 78 42.3
SGA_v2.0_scaffold424G51468 Striga asiatica HOM05D003289 ORTHO05D004594 1.7e-11 73.2 89 38.2
CBR_g8396 Chara braunii HOM05D003289 ORTHO05D004594 2.9e-11 72.4 82 47.6
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 2.9e-11 72.4 92 39.1
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 2.9e-11 72.4 84 44.0
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 2.9e-11 72.4 73 45.2
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 8.4e-11 70.9 80 51.2
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 1.1e-10 70.5 76 44.7
Solyc11g067140.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 1.1e-10 70.5 80 45.0
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 1.1e-10 70.5 80 45.0
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 1.4e-10 70.1 85 41.2
Nitab4.5_0004240g0020 Nicotiana tabacum HOM05D003289 ORTHO05D004594 1.4e-10 70.1 73 46.6
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 1.4e-10 70.1 83 41.0
Peaxi162Scf00544g00919 Petunia axillaris HOM05D003289 ORTHO05D004594 1.9e-10 69.7 75 45.3
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 2.5e-10 69.3 82 39.0
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 2.5e-10 69.3 75 44.0
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 2.5e-10 69.3 81 38.3
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 5.5e-10 68.2 83 38.6
Nitab4.5_0003532g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 5.5e-10 68.2 80 42.5
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 5.5e-10 68.2 77 44.2
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 3.5e-09 65.5 76 46.1
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 4.6e-09 65.1 81 37.0
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 1.0e-08 63.9 77 42.9
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 1.0e-08 63.9 83 39.8
HanXRQChr09g0249481 Helianthus annuus HOM05D003289 ORTHO05D004594 1.3e-08 63.5 83 42.2
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 2.3e-08 62.8 79 40.5
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.9e-08 62.0 77 37.7
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.9e-08 62.0 77 37.7
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 6.7e-08 61.2 78 41.0
CDE02G3060 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 4.3e-07 58.5 75 40.0
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 2.2e-06 56.2 74 39.2
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 2.2e-06 56.2 76 38.2
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 3.7e-06 55.5 77 40.3


User provided reference genes

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