Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11733 Sequoiadendron giganteum HOM05D001026 ORTHO05D007776 1.9e-125 452.6 235 100.0
ATR0171G036 Amborella trichopoda HOM05D001026 ORTHO05D007776 7.2e-45 184.9 205 45.9
Pp3c8_12820 Physcomitrium patens HOM05D001026 ORTHO05D007776 4.4e-42 175.6 205 43.9
MBI17_g12003_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D007776 8.2e-41 171.4 204 45.6
TAR362G0069 Trochodendron aralioides HOM05D001026 ORTHO05D007776 1.1e-40 171.0 204 46.1
Mapoly0105s0013 Marchantia polymorpha HOM05D001026 ORTHO05D007776 3.5e-39 166.0 171 46.2
Nn4g26174 Nelumbo nucifera HOM05D001026 ORTHO05D007776 4.5e-39 165.6 204 44.1
Aqoxy2G03248 Aquilegia oxysepala HOM05D001026 ORTHO05D007776 2.9e-38 162.9 204 43.6
Dinv32961 Davidia involucrata HOM05D000321 ORTHO05D000204 8.5e-38 161.4 205 44.9
SMO143G0219 Selaginella moellendorffii HOM05D001026 ORTHO05D007776 4.7e-36 155.6 209 38.8
Hma1.2p1_0257F.1_g103780 Hydrangea macrophylla HOM05D001026 ORTHO05D007776 6.1e-36 155.2 208 41.3
CBR_g22242 Chara braunii HOM05D001026 ORTHO05D007776 1.4e-35 154.1 210 38.6
Prupe.8G244800 Prunus persica HOM05D001026 ORTHO05D007776 1.4e-35 154.1 208 40.4
PGR044G0834 Punica granatum HOM05D001026 ORTHO05D007776 1.4e-35 154.1 198 42.9
Manes.05G073400 Manihot esculenta HOM05D001026 ORTHO05D007776 2.3e-35 153.3 204 43.6
Rhsim01G0276100 Rhododendron simsii HOM05D001026 ORTHO05D007776 3.0e-35 152.9 205 41.0
CiPaw.08G103200 Carya illinoinensis HOM05D001026 ORTHO05D007776 4.0e-35 152.5 205 42.9
vmacro14935 Vaccinium macrocarpon HOM05D001026 ORTHO05D007776 4.0e-35 152.5 205 40.5
Ciclev10023436m.g Citrus clementina HOM05D001026 ORTHO05D007776 5.2e-35 152.1 208 41.3
QL12p022621 Quercus lobata HOM05D001026 ORTHO05D007776 6.8e-35 151.8 207 40.1
Cfa006105 Carpinus fangiana HOM05D001026 ORTHO05D007776 8.8e-35 151.4 207 41.5
Peaxi162Scf00104g00022 Petunia axillaris HOM05D001026 ORTHO05D007776 8.8e-35 151.4 206 41.3
PGSC0003DMG400000954 Solanum tuberosum HOM05D001026 ORTHO05D007776 8.8e-35 151.4 207 41.1
Sopen09g026500 Solanum pennellii HOM05D001026 ORTHO05D007776 1.5e-34 150.6 207 41.1
Atru.chr5.1362 Acer truncatum HOM05D001026 ORTHO05D007776 2.6e-34 149.8 205 40.5
Nitab4.5_0007392g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 2.6e-34 149.8 207 40.6
CsaV3_7G028580 Cucumis sativus L. HOM05D001026 ORTHO05D007776 3.4e-34 149.4 212 37.3
Nitab4.5_0006180g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 3.4e-34 149.4 207 40.6
Cc08_g00630 Coffea canephora HOM05D001026 ORTHO05D007776 4.4e-34 149.1 214 39.3
Solyc09g064800.3 Solanum lycopersicum HOM05D001026 ORTHO05D007776 4.4e-34 149.1 207 40.6
MD03G1268800 Malus domestica HOM05D001026 ORTHO05D007776 1.7e-33 147.1 209 39.7
CAN.G79.69 Capsicum annuum HOM05D001026 ORTHO05D007776 2.2e-33 146.7 207 39.1
Hund18056 Selenicereus undatus HOM05D001026 ORTHO05D007776 2.8e-33 146.4 205 39.0
MD11G1289600 Malus domestica HOM05D001026 ORTHO05D007776 3.7e-33 146.0 206 40.8
CSS0044600 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D007776 4.8e-33 145.6 207 39.6
CSS0035433 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D007776 8.3e-33 144.8 207 39.6
Haze_04745 Corylus avellana HOM05D001026 ORTHO05D007776 8.3e-33 144.8 212 38.7
Glyma.19G153700 Glycine max HOM05D001026 ORTHO05D007776 8.3e-33 144.8 203 39.9
MELO3C015861.2 Cucumis melo HOM05D001026 ORTHO05D007776 1.1e-32 144.4 207 38.2
FvH4_2g23951 Fragaria vesca HOM05D001026 ORTHO05D007776 1.8e-32 143.7 211 37.9
EL10Ac3g06307 Beta vulgaris HOM05D001026 ORTHO05D007776 3.1e-32 142.9 206 36.9
ClCG09G006860 Citrullus lanatus HOM05D001026 ORTHO05D007776 3.1e-32 142.9 210 37.1
RcHm_v2.0_Chr6g0291581 Rosa chinensis HOM05D001026 ORTHO05D007776 5.4e-32 142.1 210 36.7
PSO170G4311 Papaver somniferum HOM05D001026 ORTHO05D007776 7.0e-32 141.7 205 41.0
Ah.07g204130 Amaranthus hybridus HOM05D001026 ORTHO05D007776 1.2e-31 141.0 205 37.6
FAN20G1656 Fragaria x ananassa HOM05D001026 ORTHO05D007776 1.2e-31 141.0 210 37.1
PSO407G0091 Papaver somniferum HOM05D001026 ORTHO05D007776 1.2e-31 141.0 206 39.8
Cpa.g.sc485.4 Carica papaya HOM05D001026 ORTHO05D007776 1.6e-31 140.6 205 39.0
FAN24G3460 Fragaria x ananassa HOM05D001026 ORTHO05D007776 2.7e-31 139.8 211 37.4
Glyma.03G151200 Glycine max HOM05D001026 ORTHO05D007776 3.5e-31 139.4 203 38.4
Sabra02G0167800 Salix brachista HOM05D001026 ORTHO05D007776 3.5e-31 139.4 203 39.4
FAN15G0060 Fragaria x ananassa HOM05D001026 ORTHO05D007776 4.5e-31 139.0 210 36.7
FAN27G1002 Fragaria x ananassa HOM05D001026 ORTHO05D007776 5.9e-31 138.7 210 37.1
THA.LOC104801221 Tarenaya hassleriana HOM05D001026 ORTHO05D007776 7.7e-31 138.3 206 36.4
Eucgr.K03392 Eucalyptus grandis HOM05D001026 ORTHO05D007776 1.0e-30 137.9 208 37.5
A10p01850 Brassica napus HOM05D001026 ORTHO05D007776 1.3e-30 137.5 210 39.0
BraA10t42459Z Brassica rapa HOM05D001026 ORTHO05D007776 1.3e-30 137.5 210 39.0
CARHR002620 Cardamine hirsuta HOM05D001026 ORTHO05D007776 2.9e-30 136.3 207 36.7
Potri.002G219900 Populus trichocarpa HOM05D001026 ORTHO05D007776 3.8e-30 136.0 201 39.3
AUR62002608 Chenopodium quinoa HOM05D001026 ORTHO05D007776 5.0e-30 135.6 206 35.9
BcaC05g24547 Brassica carinata HOM05D001026 ORTHO05D007776 8.5e-30 134.8 208 37.0
DCAR_002753 Daucus carota HOM05D001026 ORTHO05D007776 8.5e-30 134.8 202 39.1
BcaC07g36972 Brassica carinata HOM05D001026 ORTHO05D007776 1.5e-29 134.0 210 35.7
BolC5t28961H Brassica oleracea HOM05D001026 ORTHO05D007776 1.5e-29 134.0 209 38.3
CANSAT80G1415 Cannabis sativa HOM05D001026 ORTHO05D007776 1.5e-29 134.0 207 35.7
BolC8t46852H Brassica oleracea HOM05D001026 ORTHO05D007776 1.9e-29 133.7 210 35.7
Carub.0001s0242 Capsella rubella HOM05D001026 ORTHO05D007776 1.9e-29 133.7 207 37.2
C08p00520 Brassica napus HOM05D001026 ORTHO05D007776 2.5e-29 133.3 210 35.7
AUR62030031 Chenopodium quinoa HOM05D001026 ORTHO05D007776 2.5e-29 133.3 206 35.4
Ca_08568_v3 Cicer arietinum L. HOM05D001026 ORTHO05D007776 2.5e-29 133.3 206 36.9
AL1G12820 Arabidopsis lyrata HOM05D001026 ORTHO05D007776 3.2e-29 132.9 207 36.7
Gohir.D13G211742 Gossypium hirsutum HOM05D001026 ORTHO05D007776 3.2e-29 132.9 205 37.6
Thecc.01G283700 Theobroma cacao HOM05D001026 ORTHO05D007776 3.2e-29 132.9 205 39.0
TWI59G0008 Tripterygium wilfordii HOM05D001026 ORTHO05D007776 3.2e-29 132.9 206 39.8
VMungo1383G3283 Vigna mungo HOM05D001026 ORTHO05D007776 3.2e-29 132.9 226 34.1
BraA08t35637Z Brassica rapa HOM05D001026 ORTHO05D007776 5.5e-29 132.1 207 34.8
TPR.G18118 Trifolium pratense HOM05D001026 ORTHO05D007776 5.5e-29 132.1 206 36.9
Medtr7g094560 Medicago truncatula HOM05D001026 ORTHO05D007776 9.5e-29 131.3 215 36.7
Sed0000979 Sechium edule HOM05D001026 ORTHO05D007776 9.5e-29 131.3 207 36.7
Phvul.001G148700 Phaseolus vulgaris HOM05D001026 ORTHO05D007776 1.2e-28 131.0 227 35.7
COL.COLO4_09141 Corchorus olitorius HOM05D001026 ORTHO05D007776 1.6e-28 130.6 205 38.0
Duzib133G0154 Durio zibethinus HOM05D001026 ORTHO05D007776 1.6e-28 130.6 205 36.6
Thhalv10006762m.g Eutrema salsugineum HOM05D001026 ORTHO05D007776 1.6e-28 130.6 207 36.7
Lj1g0013086 Lotus japonicus HOM05D001026 ORTHO05D007776 1.6e-28 130.6 204 38.7
Sp1g02300 Schrenkiella parvula HOM05D001026 ORTHO05D007776 1.6e-28 130.6 207 35.7
Lj2P1178T14 Lonicera japonica HOM05D001026 ORTHO05D007776 2.1e-28 130.2 205 38.5
AT1G03310 Arabidopsis thaliana HOM05D001026 ORTHO05D007776 4.7e-28 129.0 207 35.7
HanXRQChr15g0466461 Helianthus annuus HOM05D001026 ORTHO05D007776 4.7e-28 129.0 192 34.4
Oeu000145.1 Olea europaea HOM05D001026 ORTHO05D007776 4.7e-28 129.0 171 38.6
C05p01830 Brassica napus HOM05D001026 ORTHO05D007776 6.1e-28 128.6 211 37.0
Duzib138G1494 Durio zibethinus HOM05D001026 ORTHO05D007776 6.1e-28 128.6 205 36.6
BcaC05g24643 Brassica carinata HOM05D001026 ORTHO05D007776 8.0e-28 128.3 211 37.0
SGA_v2.0_scaffold8G04456 Striga asiatica HOM05D001026 ORTHO05D007776 8.0e-28 128.3 205 37.6
Gohir.D11G125900 Gossypium hirsutum HOM05D001026 ORTHO05D007776 1.0e-27 127.9 205 36.6
Gorai.007G134600 Gossypium raimondii HOM05D001026 ORTHO05D007776 1.0e-27 127.9 205 36.6
A08p37400 Brassica napus HOM05D001026 ORTHO05D007776 2.3e-27 126.7 207 34.3
Lsat_1_v5_gn_9_4440 Lactuca sativa HOM05D001026 ORTHO05D007776 2.3e-27 126.7 205 36.6
MSTRG.5199 Avicennia marina HOM05D001026 ORTHO05D007776 8.8e-27 124.8 199 37.2
Phvul.005G040300 Phaseolus vulgaris HOM05D001026 ORTHO05D007776 1.5e-26 124.0 204 37.3
unitig_747.g21274 Utricularia gibba HOM05D001026 ORTHO05D007776 4.4e-26 122.5 209 34.0
Psat3g063520 Pisum sativum HOM05D001026 ORTHO05D007776 7.5e-26 121.7 208 36.1
Aa31LG1G9220 Aethionema arabicum HOM05D001026 ORTHO05D007776 9.8e-26 121.3 209 35.4
Gohir.A11G120800 Gossypium hirsutum HOM05D001026 ORTHO05D007776 2.2e-25 120.2 200 36.0
ECA247G0901 Erigeron canadensis HOM05D001026 ORTHO05D007776 8.3e-25 118.2 205 35.1
CDE02G1450 Ceratophyllum demersum HOM05D001026 ORTHO05D007776 1.4e-24 117.5 168 41.1
Migut.N00854 Erythranthe guttata HOM05D001026 ORTHO05D007776 1.8e-24 117.1 200 36.0
Sc06g0006960 Simmondsia chinensis HOM05D001026 ORTHO05D007776 1.2e-23 114.4 154 37.0
CARHR005920 Cardamine hirsuta HOM05D001026 ORTHO05D007776 5.9e-23 112.1 173 35.8
Zm00001eb287400 Zea mays HOM05D001026 ORTHO05D007776 1.1e-21 107.8 122 41.0
SalBow1G6883 Salvia bowleyana HOM05D001026 ORTHO05D007776 2.2e-17 93.6 94 45.7
AagrBONN_evm.TU.Sc2ySwM_117.482 Anthoceros agrestis HOM05D001026 ORTHO05D007776 1.2e-15 87.8 78 51.3
BcaC05g24545 Brassica carinata HOM05D001026 ORTHO05D007776 2.7e-15 86.7 85 49.4
Os05g0393700 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D007776 4.6e-15 85.9 122 35.2
SalBow1G2928 Salvia bowleyana HOM05D001026 ORTHO05D007776 4.9e-09 65.9 140 35.0
Cre17.g698850 Chlamydomonas reinhardtii HOM05D001026 ORTHO05D007776 1.6e-07 60.8 206 25.2
TPR.G39639 Trifolium pratense HOM05D001026 ORTHO05D050400 2.3e-06 57.0 55 49.1


User provided reference genes

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