Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10555 Sequoiadendron giganteum HOM05D034465 ORTHO05D026108 2.2e-82 308.9 154 100.0
SEGI_22858 Sequoiadendron giganteum HOM05D034465 ORTHO05D026108 2.2e-82 308.9 154 100.0
SEGI_35612 Sequoiadendron giganteum HOM05D034465 ORTHO05D026108 1.0e-68 263.5 156 86.5
SEGI_24742 Sequoiadendron giganteum HOM05D000413 ORTHO05D026108 1.2e-32 143.7 266 40.2
Haze_25635 Corylus avellana HOM05D000413 ORTHO05D000292 6.6e-15 84.7 151 36.4
TAR383G0499 Trochodendron aralioides HOM05D000413 ORTHO05D000292 4.3e-14 82.0 232 28.9
TAR365G0554 Trochodendron aralioides HOM05D000413 ORTHO05D000292 6.9e-12 74.7 229 27.9
QL04p014722 Quercus lobata HOM05D000413 ORTHO05D000292 2.0e-11 73.2 168 30.4
Dinv30183 Davidia involucrata HOM05D000413 ORTHO05D000292 5.8e-11 71.6 85 41.2
FAN15G0471 Fragaria x ananassa HOM05D000413 ORTHO05D000292 9.9e-11 70.9 75 44.0
Peaxi162Scf00780g00039 Petunia axillaris HOM05D000413 ORTHO05D000292 9.9e-11 70.9 77 44.2
Lj7A635T39 Lonicera japonica HOM05D000413 ORTHO05D000292 1.3e-10 70.5 115 33.9
FAN20G0408 Fragaria x ananassa HOM05D000413 ORTHO05D000292 1.7e-10 70.1 75 44.0
Hma1.2p1_0000F.1_g000850 Hydrangea macrophylla HOM05D000413 ORTHO05D000292 2.9e-10 69.3 85 40.0
GSVIVG01035801001 Vitis vinifera HOM05D000413 ORTHO05D000292 2.9e-10 69.3 77 41.6
CiPaw.07G220300 Carya illinoinensis HOM05D000413 ORTHO05D000292 3.8e-10 68.9 85 41.2
FvH4_2g29700 Fragaria vesca HOM05D000413 ORTHO05D000292 4.9e-10 68.6 75 42.7
FAN24G3235 Fragaria x ananassa HOM05D000413 ORTHO05D000292 4.9e-10 68.6 75 42.7
Ca_21709_v3 Cicer arietinum L. HOM05D000413 ORTHO05D000292 1.1e-09 67.4 89 37.1
Cc06_g09020 Coffea canephora HOM05D000413 ORTHO05D000292 1.9e-09 66.6 77 40.3
QL04p014776 Quercus lobata HOM05D000413 ORTHO05D000292 1.9e-09 66.6 82 37.8
CSS0037226 Camellia sinensis var. sinensis HOM05D000413 ORTHO05D000292 2.4e-09 66.2 76 42.1
Actinidia40442 Actinidia chinensis HOM05D000413 ORTHO05D000292 3.2e-09 65.9 82 37.8
Migut.M00913 Erythranthe guttata HOM05D000413 ORTHO05D000292 3.2e-09 65.9 157 32.5
Lj4C463G1 Lonicera japonica HOM05D000413 ORTHO05D000292 5.5e-09 65.1 89 38.2
MBI01_g34141_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 5.5e-09 65.1 76 40.8
Os01g0648000 Oryza sativa ssp. japonica HOM05D000413 ORTHO05D000292 5.5e-09 65.1 80 38.8
Sabra06G0195500 Salix brachista HOM05D000413 ORTHO05D000292 5.5e-09 65.1 92 34.8
Actinidia14625 Actinidia chinensis HOM05D000413 ORTHO05D000292 7.1e-09 64.7 77 41.6
CiPaw.04G169000 Carya illinoinensis HOM05D000413 ORTHO05D000292 9.3e-09 64.3 78 39.7
ClCG06G010760 Citrullus lanatus HOM05D000413 ORTHO05D000292 9.3e-09 64.3 89 36.0
CsaV3_1G029650 Cucumis sativus L. HOM05D000413 ORTHO05D000292 1.2e-08 63.9 90 36.7
Oeu030200.1 Olea europaea HOM05D000413 ORTHO05D000292 1.2e-08 63.9 77 40.3
QL02p087193 Quercus lobata HOM05D000413 ORTHO05D000292 1.2e-08 63.9 89 39.3
CARHR118540 Cardamine hirsuta HOM05D000413 ORTHO05D000292 1.6e-08 63.5 74 43.2
CiPaw.03G239300 Carya illinoinensis HOM05D000413 ORTHO05D000292 1.6e-08 63.5 76 38.2
Nn8g39356 Nelumbo nucifera HOM05D000413 ORTHO05D000292 2.1e-08 63.2 76 38.2
AL4G19630 Arabidopsis lyrata HOM05D000413 ORTHO05D000292 3.5e-08 62.4 74 41.9
AT2G26650 Arabidopsis thaliana HOM05D000413 ORTHO05D000292 3.5e-08 62.4 74 41.9
Duzib187G1403 Durio zibethinus HOM05D000413 ORTHO05D000292 3.5e-08 62.4 231 25.1
MD15G1119300 Malus domestica HOM05D000413 ORTHO05D000292 3.5e-08 62.4 99 34.3
Sed0001092 Sechium edule HOM05D000413 ORTHO05D000292 3.5e-08 62.4 90 36.7
COL.COLO4_15586 Corchorus olitorius HOM05D000413 ORTHO05D000292 4.6e-08 62.0 239 25.1
Nitab4.5_0001672g0020 Nicotiana tabacum HOM05D000413 ORTHO05D000292 4.6e-08 62.0 72 40.3
MELO3C026629.2 Cucumis melo HOM05D000413 ORTHO05D000292 6.0e-08 61.6 90 35.6
Sed0008366 Sechium edule HOM05D000413 ORTHO05D000292 6.0e-08 61.6 90 36.7
arahy.Tifrunner.gnm1.ann1.7WV7S8 Arachis hypogaea HOM05D000413 ORTHO05D000292 7.9e-08 61.2 77 37.7
Nitab4.5_0003235g0040 Nicotiana tabacum HOM05D000413 ORTHO05D000292 7.9e-08 61.2 72 40.3
Potri.006G154600 Populus trichocarpa HOM05D000413 ORTHO05D000292 7.9e-08 61.2 89 34.8
HPP92_020172 Vanilla planifolia HOM05D000413 ORTHO05D000292 7.9e-08 61.2 74 39.2
Actinidia13261 Actinidia chinensis HOM05D000413 ORTHO05D000292 1.0e-07 60.8 76 39.5
BcaB01g03031 Brassica carinata HOM05D000413 ORTHO05D000292 1.0e-07 60.8 74 40.5
ECA233G2705 Erigeron canadensis HOM05D000413 ORTHO05D000292 1.0e-07 60.8 71 39.4
Manes.06G050400 Manihot esculenta HOM05D000413 ORTHO05D000292 1.0e-07 60.8 76 36.8
Manes.06G059201 Manihot esculenta HOM05D000413 ORTHO05D000292 1.0e-07 60.8 76 36.8
Potri.006G249900 Populus trichocarpa HOM05D000413 ORTHO05D000292 1.0e-07 60.8 92 33.7
Rhsim02G0193800 Rhododendron simsii HOM05D000413 ORTHO05D000292 1.0e-07 60.8 85 34.1
GSVIVG01015479001 Vitis vinifera HOM05D000413 ORTHO05D000292 1.0e-07 60.8 76 39.5
DCAR_014857 Daucus carota HOM05D000413 ORTHO05D000292 1.3e-07 60.5 87 34.5
DCAR_017459 Daucus carota HOM05D000413 ORTHO05D000292 1.3e-07 60.5 76 38.2
CAN.G713.10 Capsicum annuum HOM05D000413 ORTHO05D000292 1.8e-07 60.1 75 38.7
Duzib168G1620 Durio zibethinus HOM05D000413 ORTHO05D000292 1.8e-07 60.1 236 23.7
Gohir.D08G260500 Gossypium hirsutum HOM05D000413 ORTHO05D000292 1.8e-07 60.1 76 38.2
Lalb_Chr12g0197711 Lupinus albus HOM05D000413 ORTHO05D000292 1.8e-07 60.1 91 36.3
Nitab4.5_0003813g0040 Nicotiana tabacum HOM05D000413 ORTHO05D000292 1.8e-07 60.1 71 39.4
PGR102G0201 Punica granatum HOM05D000413 ORTHO05D000292 1.8e-07 60.1 235 23.8
DCAR_007690 Daucus carota HOM05D000413 ORTHO05D000292 2.3e-07 59.7 76 38.2
Gohir.A08G239900 Gossypium hirsutum HOM05D000413 ORTHO05D000292 2.3e-07 59.7 76 36.8
Gorai.004G278500 Gossypium raimondii HOM05D000413 ORTHO05D000292 2.3e-07 59.7 76 36.8
Lsat_1_v5_gn_8_58080 Lactuca sativa HOM05D000413 ORTHO05D000292 2.3e-07 59.7 72 37.5
Lj7C717T4 Lonicera japonica HOM05D000413 ORTHO05D000292 2.3e-07 59.7 76 38.2
Psat0s3462g0080 Pisum sativum HOM05D000413 ORTHO05D000292 2.3e-07 59.7 91 36.3
THA.LOC104809011 Tarenaya hassleriana HOM05D000413 ORTHO05D000292 2.3e-07 59.7 76 38.2
arahy.Tifrunner.gnm1.ann1.T65EYX Arachis hypogaea HOM05D000413 ORTHO05D000292 3.0e-07 59.3 77 37.7
EL10Ac2g02579 Beta vulgaris HOM05D000413 ORTHO05D000292 3.0e-07 59.3 71 39.4
AUR62030680 Chenopodium quinoa HOM05D000413 ORTHO05D000292 3.0e-07 59.3 78 38.5
Glyma.05G010600 Glycine max HOM05D000413 ORTHO05D000292 3.0e-07 59.3 91 35.2
Gohir.A07G002500 Gossypium hirsutum HOM05D000413 ORTHO05D000292 3.0e-07 59.3 76 36.8
AUR62024868 Chenopodium quinoa HOM05D000413 ORTHO05D000292 3.9e-07 58.9 78 38.5
Ca_12927_v3 Cicer arietinum L. HOM05D000413 ORTHO05D000292 3.9e-07 58.9 100 32.0
Gohir.D07G002800 Gossypium hirsutum HOM05D000413 ORTHO05D000292 3.9e-07 58.9 76 36.8
Gorai.001G002700 Gossypium raimondii HOM05D000413 ORTHO05D000292 3.9e-07 58.9 76 36.8
Peaxi162Scf00170g00321 Petunia axillaris HOM05D000413 ORTHO05D000292 3.9e-07 58.9 71 40.8
Solyc08g066990.4 Solanum lycopersicum HOM05D000413 ORTHO05D000292 3.9e-07 58.9 71 39.4
Sopen08g020940 Solanum pennellii HOM05D000413 ORTHO05D000292 3.9e-07 58.9 71 39.4
MELO3C003680.2 Cucumis melo HOM05D000413 ORTHO05D000292 5.1e-07 58.5 86 38.4
DCAR_022886 Daucus carota HOM05D000413 ORTHO05D000292 5.1e-07 58.5 78 37.2
Manes.16G118800 Manihot esculenta HOM05D000413 ORTHO05D000292 5.1e-07 58.5 77 35.1
SEGI_31874 Sequoiadendron giganteum HOM05D000413 ORTHO05D000292 5.1e-07 58.5 94 35.1
Ah.12g063840 Amaranthus hybridus HOM05D000413 ORTHO05D000292 6.7e-07 58.2 108 31.5
Carub.0004s0693 Capsella rubella HOM05D000413 ORTHO05D000292 6.7e-07 58.2 74 39.2
Ciclev10007412m.g Citrus clementina HOM05D000413 ORTHO05D000292 6.7e-07 58.2 77 35.1
HanXRQChr06g0179901 Helianthus annuus HOM05D000413 ORTHO05D000292 6.7e-07 58.2 71 36.6
Nitab4.5_0000010g0030 Nicotiana tabacum HOM05D000413 ORTHO05D000292 6.7e-07 58.2 79 40.5
Sopen12g002820 Solanum pennellii HOM05D000413 ORTHO05D000292 6.7e-07 58.2 74 36.5
TWI32G1079 Tripterygium wilfordii HOM05D000413 ORTHO05D000292 6.7e-07 58.2 76 34.2
Aqoxy7G03380 Aquilegia oxysepala HOM05D000413 ORTHO05D000292 8.7e-07 57.8 87 31.0
Gohir.A06G058400 Gossypium hirsutum HOM05D000413 ORTHO05D000292 8.7e-07 57.8 76 35.5
Gorai.010G066400 Gossypium raimondii HOM05D000413 ORTHO05D000292 8.7e-07 57.8 76 35.5
Manes.14G128600 Manihot esculenta HOM05D000413 ORTHO05D000292 8.7e-07 57.8 76 34.2
Medtr4g113530 Medicago truncatula HOM05D000413 ORTHO05D000292 8.7e-07 57.8 92 32.6
Peaxi162Scf00161g00914 Petunia axillaris HOM05D000413 ORTHO05D000292 8.7e-07 57.8 71 36.6
Solyc12g006850.2 Solanum lycopersicum HOM05D000413 ORTHO05D000292 8.7e-07 57.8 74 36.5
PGSC0003DMG400001066 Solanum tuberosum HOM05D000413 ORTHO05D000292 8.7e-07 57.8 74 36.5
ATR1134G071 Amborella trichopoda HOM05D000413 ORTHO05D000292 1.1e-06 57.4 181 28.2
CANSAT25G0912 Cannabis sativa HOM05D000413 ORTHO05D000292 1.1e-06 57.4 78 35.9
Gorai.011G043500 Gossypium raimondii HOM05D000413 ORTHO05D000292 1.1e-06 57.4 186 30.1
Potri.018G071400 Populus trichocarpa HOM05D000413 ORTHO05D000292 1.1e-06 57.4 76 32.9
vmacro05198 Vaccinium macrocarpon HOM05D000413 ORTHO05D000292 1.1e-06 57.4 72 40.3
Lalb_Chr13g0302111 Lupinus albus HOM05D000413 ORTHO05D000292 1.5e-06 57.0 77 36.4
THA.LOC104818628 Tarenaya hassleriana HOM05D000413 ORTHO05D000292 1.5e-06 57.0 71 38.0
AUR62030682 Chenopodium quinoa HOM05D000413 ORTHO05D000292 1.9e-06 56.6 71 38.0
ClCG05G017100 Citrullus lanatus HOM05D000413 ORTHO05D000292 1.9e-06 56.6 80 35.0
Glyma.17G118300 Glycine max HOM05D000413 ORTHO05D000292 1.9e-06 56.6 92 33.7
Sed0017562 Sechium edule HOM05D000413 ORTHO05D000292 1.9e-06 56.6 99 33.3
TWI34G1286 Tripterygium wilfordii HOM05D000413 ORTHO05D000292 1.9e-06 56.6 76 34.2
EL10Ac8g18584 Beta vulgaris HOM05D000413 ORTHO05D000292 2.5e-06 56.2 90 36.7
Gohir.A10G040400 Gossypium hirsutum HOM05D000413 ORTHO05D000292 2.5e-06 56.2 186 28.5
Gohir.D10G041301 Gossypium hirsutum HOM05D000413 ORTHO05D000292 2.5e-06 56.2 186 29.6
PGSC0003DMG400029083 Solanum tuberosum HOM05D000413 ORTHO05D000292 2.5e-06 56.2 78 34.6
Zm00001eb158420 Zea mays HOM05D000413 ORTHO05D000292 2.5e-06 56.2 74 36.5
Zm00001eb359320 Zea mays HOM05D000413 ORTHO05D000292 2.5e-06 56.2 81 32.1
Nitab4.5_0000151g0260 Nicotiana tabacum HOM05D000413 ORTHO05D000292 3.3e-06 55.8 71 38.0
Hund09158 Selenicereus undatus HOM05D000413 ORTHO05D000292 3.3e-06 55.8 89 36.0
Thecc.09G148500 Theobroma cacao HOM05D000413 ORTHO05D000292 3.3e-06 55.8 75 34.7
CAN.G98.16 Capsicum annuum HOM05D000413 ORTHO05D000292 4.3e-06 55.5 78 32.1
AUR62041838 Chenopodium quinoa HOM05D000413 ORTHO05D000292 4.3e-06 55.5 88 31.8
ECA236G0389 Erigeron canadensis HOM05D000413 ORTHO05D000292 4.3e-06 55.5 193 26.9
Migut.J00604 Erythranthe guttata HOM05D000413 ORTHO05D000292 4.3e-06 55.5 73 38.4
Lj4g0011866 Lotus japonicus HOM05D000413 ORTHO05D000292 4.3e-06 55.5 83 32.5
MBI04_g00940_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 4.3e-06 55.5 94 30.9
Manes.09G076529 Manihot esculenta HOM05D000413 ORTHO05D000292 4.3e-06 55.5 133 27.8
SalBow6G3449 Salvia bowleyana HOM05D000413 ORTHO05D000292 4.3e-06 55.5 71 38.0
TAR625G1082 Trochodendron aralioides HOM05D000413 ORTHO05D000292 4.3e-06 55.5 103 32.0
CsaV3_3G046580 Cucumis sativus L. HOM05D000413 ORTHO05D000292 5.6e-06 55.1 74 37.8
Gohir.D06G056700 Gossypium hirsutum HOM05D000413 ORTHO05D000292 5.6e-06 55.1 76 34.2
MBI04_g29847_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 5.6e-06 55.1 94 30.9
DCAR_027918 Daucus carota HOM05D000413 ORTHO05D000292 7.4e-06 54.7 204 27.5
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 7.4e-06 54.7 204 27.5
Hund09159 Selenicereus undatus HOM05D000413 ORTHO05D000292 7.4e-06 54.7 89 34.8
SEGI_21818 Sequoiadendron giganteum HOM05D000413 ORTHO05D000292 7.4e-06 54.7 94 37.2
VMungo1215G0278 Vigna mungo HOM05D000413 ORTHO05D000292 7.4e-06 54.7 91 33.0
PSO210G7198 Papaver somniferum HOM05D000413 ORTHO05D000292 9.6e-06 54.3 76 32.9
PGR142G0791 Punica granatum HOM05D000413 ORTHO05D000292 9.6e-06 54.3 76 34.2
TPR.G9084 Trifolium pratense HOM05D000413 ORTHO05D000292 9.6e-06 54.3 98 32.7


User provided reference genes

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