Gene: Nitab4.5_0003235g0040
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003235g0040
- Transcript Identifier Nitab4.5_0003235g0040.1
- Gene Type Coding gene
- Location Nitab4.5_0003235 : 213304-221367 : positive
Gene Family Information
- ID HOM05D000413
- #Genes/#Species 1230/100
- Phylogenetic origin
- ID ORTHO05D000292
- #Genes/#Species 1179/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0003235g0040.1
- SR1-identifier Nta21g15700.1
Descriptions
- Description Potassium channel, plant-type, Ankyrin repeat-containing domain, Ankyrin repeat, RmlC-like jelly roll fold, Cyclic nucleotide-binding domain, Ion transport domain, Two pore domain potassium channel domain, Cyclic nucleotide-binding-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006811 | IEA | InterPro | ion transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0006813 | ISO | PLAZA Integrative Orthology | potassium ion transport | AT2G26650 |
| GO:1990573 | ISO | PLAZA Integrative Orthology | potassium ion import across plasma membrane | AT2G26650 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT2G26650 |
| GO:0090333 | ISO | PLAZA Integrative Orthology | regulation of stomatal closure | AT2G26650 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT2G26650 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT2G26650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005216 | IEA | InterPro | ion channel activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005249 | ISO | PLAZA Homology (enrichment) | voltage-gated potassium channel activity | HOM05D000413 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT2G26650 |
| GO:0005242 | ISO | PLAZA Integrative Orthology | inward rectifier potassium channel activity | AT2G26650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G26650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005821 | Ion transport domain |
| IPR014710 | RmlC-like jelly roll fold |
| IPR018490 | Cyclic nucleotide-binding-like |
| IPR000595 | Cyclic nucleotide-binding domain |
| IPR020683 | Ankyrin repeat-containing domain |
| IPR013099 | Potassium channel domain |
| IPR021789 | KHA domain |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR002110 | Ankyrin repeat |
| Mapman id | Description |
|---|---|
| 24.3.2.2 | Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK) |