Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10502 Sequoiadendron giganteum HOM05D005257 ORTHO05D006425 3.4e-65 251.5 127 100.0
SEGI_16290 Sequoiadendron giganteum HOM05D005257 ORTHO05D006425 3.4e-25 118.6 145 53.8
Atru.chr2.1463 Acer truncatum HOM05D005257 ORTHO05D006425 3.9e-13 78.6 142 39.4
MSTRG.19351 Avicennia marina HOM05D005257 ORTHO05D006425 3.9e-13 78.6 138 38.4
Sc10g0005500 Simmondsia chinensis HOM05D005257 ORTHO05D006425 3.9e-13 78.6 139 38.1
SGA_v2.0_scaffold31G12800 Striga asiatica HOM05D005257 ORTHO05D006425 3.9e-13 78.6 138 38.4
Cc06_g07290 Coffea canephora HOM05D005257 ORTHO05D006425 1.1e-12 77.0 144 39.6
Actinidia21524 Actinidia chinensis HOM05D005257 ORTHO05D006425 2.5e-12 75.9 144 37.5
Cpa.g.sc56.49 Carica papaya HOM05D005257 ORTHO05D006425 5.7e-12 74.7 122 41.0
Manes.08G154800 Manihot esculenta HOM05D005257 ORTHO05D006425 5.7e-12 74.7 152 37.5
THA.LOC104802876 Tarenaya hassleriana HOM05D005257 ORTHO05D006425 5.7e-12 74.7 151 36.4
GSVIVG01029949001 Vitis vinifera HOM05D005257 ORTHO05D006425 5.7e-12 74.7 148 38.5
Duzib177G0708 Durio zibethinus HOM05D005257 ORTHO05D006425 9.7e-12 73.9 148 37.8
Gohir.A11G232100 Gossypium hirsutum HOM05D005257 ORTHO05D006425 9.7e-12 73.9 147 38.1
Hma1.2p1_0768F.1_g215600 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 9.7e-12 73.9 144 40.3
Lj4C106T9 Lonicera japonica HOM05D005257 ORTHO05D006425 9.7e-12 73.9 145 35.9
AUR62039715 Chenopodium quinoa HOM05D005257 ORTHO05D006425 1.3e-11 73.6 151 37.7
DCAR_003248 Daucus carota HOM05D005257 ORTHO05D006425 1.3e-11 73.6 139 35.3
Nitab4.5_0000098g0080 Nicotiana tabacum HOM05D005257 ORTHO05D006425 1.3e-11 73.6 147 36.7
AUR62036264 Chenopodium quinoa HOM05D005257 ORTHO05D006425 1.7e-11 73.2 151 37.7
Dinv05572 Davidia involucrata HOM05D005257 ORTHO05D006425 1.7e-11 73.2 144 36.1
Gohir.D11G243400 Gossypium hirsutum HOM05D005257 ORTHO05D006425 1.7e-11 73.2 147 37.4
Gorai.007G258400 Gossypium raimondii HOM05D005257 ORTHO05D006425 1.7e-11 73.2 147 37.4
HPP92_025446 Vanilla planifolia HOM05D005257 ORTHO05D006425 1.7e-11 73.2 148 35.1
Dinv11935 Davidia involucrata HOM05D005257 ORTHO05D006425 2.2e-11 72.8 144 36.8
Glyma.16G038400 Glycine max HOM05D005257 ORTHO05D006425 2.2e-11 72.8 152 37.5
Phvul.001G113700 Phaseolus vulgaris HOM05D005257 ORTHO05D006425 2.2e-11 72.8 152 36.8
Prupe.1G541500 Prunus persica HOM05D005257 ORTHO05D006425 2.2e-11 72.8 142 38.7
Ciclev10018934m.g Citrus clementina HOM05D005257 ORTHO05D006425 2.8e-11 72.4 141 38.3
VMungo1383G2809 Vigna mungo HOM05D005257 ORTHO05D006425 2.8e-11 72.4 152 38.2
Aqoxy1G00543 Aquilegia oxysepala HOM05D005257 ORTHO05D006425 3.7e-11 72.0 139 39.6
arahy.Tifrunner.gnm1.ann1.JQ1SRI Arachis hypogaea HOM05D005257 ORTHO05D006425 3.7e-11 72.0 152 37.5
Potri.013G061400 Populus trichocarpa HOM05D005257 ORTHO05D006425 3.7e-11 72.0 150 37.3
CANSAT35G0669 Cannabis sativa HOM05D005257 ORTHO05D006425 4.8e-11 71.6 148 37.2
Lj1g0012853 Lotus japonicus HOM05D005257 ORTHO05D006425 4.8e-11 71.6 153 35.3
Peaxi162Scf00117g00415 Petunia axillaris HOM05D005257 ORTHO05D006425 4.8e-11 71.6 154 36.4
Thecc.05G245000 Theobroma cacao HOM05D005257 ORTHO05D006425 4.8e-11 71.6 148 37.2
arahy.Tifrunner.gnm1.ann1.B386PI Arachis hypogaea HOM05D005257 ORTHO05D006425 6.3e-11 71.2 152 37.5
arahy.Tifrunner.gnm1.ann1.DQ02GG Arachis hypogaea HOM05D005257 ORTHO05D006425 6.3e-11 71.2 152 37.5
Lj1g0008743 Lotus japonicus HOM05D005257 ORTHO05D006425 6.3e-11 71.2 153 35.3
TWI31G1180 Tripterygium wilfordii HOM05D005257 ORTHO05D006425 6.3e-11 71.2 147 36.7
ATR0697G033 Amborella trichopoda HOM05D005257 ORTHO05D006425 8.2e-11 70.9 148 36.5
EL10Ac5g11757 Beta vulgaris HOM05D005257 ORTHO05D006425 8.2e-11 70.9 151 36.4
HanXRQChr02g0058981 Helianthus annuus HOM05D005257 ORTHO05D006425 8.2e-11 70.9 150 38.7
Oeu044649.1 Olea europaea HOM05D005257 ORTHO05D006425 1.1e-10 70.5 138 35.5
SalBow3G0128 Salvia bowleyana HOM05D005257 ORTHO05D006425 1.1e-10 70.5 142 35.2
CSS0043158 Camellia sinensis var. sinensis HOM05D005257 ORTHO05D006425 1.4e-10 70.1 144 36.8
HanXRQChr12g0354211 Helianthus annuus HOM05D005257 ORTHO05D006425 1.4e-10 70.1 150 39.3
Lsat_1_v5_gn_9_60281 Lactuca sativa HOM05D005257 ORTHO05D006425 1.4e-10 70.1 144 39.6
MBI05_g13905_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 1.4e-10 70.1 140 38.6
BolC2t06856H Brassica oleracea HOM05D005257 ORTHO05D006425 1.8e-10 69.7 147 36.1
Glyma.19G114400 Glycine max HOM05D005257 ORTHO05D006425 1.8e-10 69.7 152 35.5
A02p04570 Brassica napus HOM05D005257 ORTHO05D006425 2.4e-10 69.3 147 36.1
BraA02t05418Z Brassica rapa HOM05D005257 ORTHO05D006425 2.4e-10 69.3 146 36.3
ClCG04G005430 Citrullus lanatus HOM05D005257 ORTHO05D006425 2.4e-10 69.3 147 38.1
Migut.J00763 Erythranthe guttata HOM05D005257 ORTHO05D006425 2.4e-10 69.3 140 35.0
Ah.15g100140 Amaranthus hybridus HOM05D005257 ORTHO05D006425 3.1e-10 68.9 152 38.2
arahy.Tifrunner.gnm1.ann1.YCKM6W Arachis hypogaea HOM05D005257 ORTHO05D006425 3.1e-10 68.9 165 37.0
Haze_20460 Corylus avellana HOM05D005257 ORTHO05D006425 3.1e-10 68.9 147 37.4
FAN24G1403 Fragaria x ananassa HOM05D005257 ORTHO05D006425 3.1e-10 68.9 147 37.4
PSO339G0351 Papaver somniferum HOM05D005257 ORTHO05D006425 3.1e-10 68.9 146 34.2
PSO384G0627 Papaver somniferum HOM05D005257 ORTHO05D006425 3.1e-10 68.9 146 34.2
vmacro18109 Vaccinium macrocarpon HOM05D005257 ORTHO05D006425 3.1e-10 68.9 176 31.2
CsaV3_4G012150 Cucumis sativus L. HOM05D005257 ORTHO05D006425 4.1e-10 68.6 147 36.7
Eucgr.A02125 Eucalyptus grandis HOM05D005257 ORTHO05D006425 4.1e-10 68.6 153 35.3
PGR042G1596 Punica granatum HOM05D005257 ORTHO05D006425 4.1e-10 68.6 148 34.5
C02p09500 Brassica napus HOM05D005257 ORTHO05D006425 5.3e-10 68.2 147 36.1
Cfa017688 Carpinus fangiana HOM05D005257 ORTHO05D006425 5.3e-10 68.2 147 34.0
Medtr7g086290 Medicago truncatula HOM05D005257 ORTHO05D006425 5.3e-10 68.2 143 35.7
CAN.G732.36 Capsicum annuum HOM05D005257 ORTHO05D006425 6.9e-10 67.8 151 35.1
RcHm_v2.0_Chr6g0270841 Rosa chinensis HOM05D005257 ORTHO05D006425 6.9e-10 67.8 151 35.8
FvH4_2g11600 Fragaria vesca HOM05D005257 ORTHO05D006425 9.1e-10 67.4 147 36.7
FAN15G1561 Fragaria x ananassa HOM05D005257 ORTHO05D006425 9.1e-10 67.4 147 36.7
FAN27G2011 Fragaria x ananassa HOM05D005257 ORTHO05D006425 9.1e-10 67.4 147 36.7
BcaB05g23293 Brassica carinata HOM05D005257 ORTHO05D006425 1.2e-09 67.0 147 35.4
ECA232G0672 Erigeron canadensis HOM05D005257 ORTHO05D006425 1.2e-09 67.0 144 36.8
MBI05_g42570_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 1.2e-09 67.0 147 36.7
Lalb_Chr10g0095341 Lupinus albus HOM05D005257 ORTHO05D006425 1.5e-09 66.6 145 35.2
TPR.G17857 Trifolium pratense HOM05D005257 ORTHO05D006425 1.5e-09 66.6 143 33.6
Aa31LG11G11610 Aethionema arabicum HOM05D005257 ORTHO05D006425 2.0e-09 66.2 148 35.1
Ca_08293_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 2.0e-09 66.2 152 34.9
Ca_29914_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 2.0e-09 66.2 152 34.9
Nn1g06286 Nelumbo nucifera HOM05D005257 ORTHO05D006425 2.0e-09 66.2 146 37.0
Solyc03g097280.4 Solanum lycopersicum HOM05D005257 ORTHO05D006425 2.0e-09 66.2 157 37.6
Sopen03g028060 Solanum pennellii HOM05D001816 ORTHO05D002001 2.0e-09 66.2 157 37.6
AL6G29030 Arabidopsis lyrata HOM05D005257 ORTHO05D006425 2.6e-09 65.9 147 35.4
MD12G1008000 Malus domestica HOM05D005257 ORTHO05D006425 3.4e-09 65.5 133 36.8
Psat3g087120 Pisum sativum HOM05D005257 ORTHO05D006425 3.4e-09 65.5 143 33.6
PGR042G3559 Punica granatum HOM05D005257 ORTHO05D006425 3.4e-09 65.5 149 34.9
AT5G17930 Arabidopsis thaliana HOM05D005257 ORTHO05D006425 4.5e-09 65.1 147 35.4
CDE10G0660 Ceratophyllum demersum HOM05D005257 ORTHO05D006425 4.5e-09 65.1 148 33.8
Rhsim08G0079300 Rhododendron simsii HOM05D005257 ORTHO05D006425 4.5e-09 65.1 175 33.7
Sed0016053 Sechium edule HOM05D005257 ORTHO05D006425 4.5e-09 65.1 148 37.2
Carub.0006s1614 Capsella rubella HOM05D005257 ORTHO05D006425 1.0e-08 63.9 138 31.9
CiPaw.09G164800 Carya illinoinensis HOM05D005257 ORTHO05D006425 1.0e-08 63.9 138 36.2
Nitab4.5_0001606g0020 Nicotiana tabacum HOM05D005257 ORTHO05D006425 1.3e-08 63.5 147 34.0
TAR362G1082 Trochodendron aralioides HOM05D005257 ORTHO05D006425 1.3e-08 63.5 147 36.1
MELO3C008815.2 Cucumis melo HOM05D005257 ORTHO05D006425 1.7e-08 63.2 144 38.2
Pp3c3_21680 Physcomitrium patens HOM05D005257 ORTHO05D006425 2.2e-08 62.8 148 34.5
Pp3c3_21687 Physcomitrium patens HOM05D005257 ORTHO05D006425 2.2e-08 62.8 148 34.5
Thhalv10012737m.g Eutrema salsugineum HOM05D005257 ORTHO05D006425 6.5e-08 61.2 147 30.6
Sp6g26340 Schrenkiella parvula HOM05D005257 ORTHO05D006425 6.5e-08 61.2 147 35.4
CARHR195170 Cardamine hirsuta HOM05D005257 ORTHO05D006425 1.1e-07 60.5 143 34.3
Psat5g302960 Pisum sativum HOM05D005257 ORTHO05D006425 1.9e-07 59.7 138 31.9
Cfa005496 Carpinus fangiana HOM05D005257 ORTHO05D006425 3.2e-07 58.9 147 32.7
AagrBONN_evm.TU.Sc2ySwM_340.475 Anthoceros agrestis HOM05D005257 ORTHO05D006425 4.2e-07 58.5 148 32.4
Mapoly0135s0015 Marchantia polymorpha HOM05D005257 ORTHO05D006425 4.2e-07 58.5 148 32.4
GSVIVG01027853001 Vitis vinifera HOM05D005257 ORTHO05D006425 5.5e-07 58.2 148 33.8
QL07p027173 Quercus lobata HOM05D005257 ORTHO05D006425 7.9e-06 54.3 45 68.9


User provided reference genes

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