Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10367 Sequoiadendron giganteum HOM05D000173 ORTHO05D004400 1.2e-36 156.0 77 100.0
SEGI_01343 Sequoiadendron giganteum HOM05D000173 ORTHO05D004400 2.8e-14 81.6 39 97.4
Prupe.4G154200 Prunus persica HOM05D000173 ORTHO05D004400 2.7e-09 65.1 42 66.7
Manes.01G012800 Manihot esculenta HOM05D000173 ORTHO05D004400 3.6e-09 64.7 45 66.7
Sed0017324 Sechium edule HOM05D000173 ORTHO05D004400 3.6e-09 64.7 42 69.0
arahy.Tifrunner.gnm1.ann1.1T6SIZ Arachis hypogaea HOM05D000173 ORTHO05D004400 4.6e-09 64.3 42 69.0
arahy.Tifrunner.gnm1.ann1.SSG76K Arachis hypogaea HOM05D000173 ORTHO05D004400 4.6e-09 64.3 42 69.0
CDE07G0020 Ceratophyllum demersum HOM05D000173 ORTHO05D004400 4.6e-09 64.3 42 71.4
ClCG06G014940 Citrullus lanatus HOM05D000173 ORTHO05D004400 4.6e-09 64.3 42 69.0
MELO3C017295.2 Cucumis melo HOM05D000173 ORTHO05D004400 4.6e-09 64.3 42 69.0
CsaV3_1G003700 Cucumis sativus L. HOM05D000173 ORTHO05D004400 4.6e-09 64.3 42 69.0
Rhsim12G0144100 Rhododendron simsii HOM05D000173 ORTHO05D004400 4.6e-09 64.3 43 65.1
Phvul.010G044300 Phaseolus vulgaris HOM05D000173 ORTHO05D004400 6.1e-09 63.9 42 69.0
Thecc.09G221900 Theobroma cacao HOM05D000173 ORTHO05D004400 6.1e-09 63.9 42 69.0
TPR.G32123 Trifolium pratense HOM05D000173 ORTHO05D004400 6.1e-09 63.9 42 69.0
Ca_14793_v3 Cicer arietinum L. HOM05D000173 ORTHO05D004400 7.9e-09 63.5 42 66.7
Psat4g222600 Pisum sativum HOM05D000173 ORTHO05D004400 7.9e-09 63.5 42 69.0
Sed0004858 Sechium edule HOM05D000173 ORTHO05D004400 7.9e-09 63.5 42 66.7
VMungo0331G0580 Vigna mungo HOM05D000173 ORTHO05D004400 7.9e-09 63.5 42 66.7
CDE04G0761 Ceratophyllum demersum HOM05D000173 ORTHO05D004400 1.0e-08 63.2 42 69.0
Gohir.A13G215300 Gossypium hirsutum HOM05D000173 ORTHO05D004400 1.0e-08 63.2 42 69.0
Gohir.D13G219000 Gossypium hirsutum HOM05D000173 ORTHO05D004400 1.0e-08 63.2 42 69.0
Lj2g0020115 Lotus japonicus HOM05D000173 ORTHO05D004400 1.0e-08 63.2 42 69.0
Aqoxy2G03970 Aquilegia oxysepala HOM05D000173 ORTHO05D004400 1.4e-08 62.8 42 66.7
Aqoxy5G04178 Aquilegia oxysepala HOM05D000173 ORTHO05D004400 1.4e-08 62.8 39 71.8
Ciclev10020836m.g Citrus clementina HOM05D000173 ORTHO05D004400 1.8e-08 62.4 42 66.7
COL.COLO4_38438 Corchorus olitorius HOM05D000173 ORTHO05D004400 1.8e-08 62.4 42 66.7
MD03G1252000 Malus domestica HOM05D000173 ORTHO05D004400 1.8e-08 62.4 42 66.7
Medtr5g066400 Medicago truncatula HOM05D000173 ORTHO05D004400 1.8e-08 62.4 42 66.7
Medtr8g464900 Medicago truncatula HOM05D000173 ORTHO05D004400 1.8e-08 62.4 42 66.7
RcHm_v2.0_Chr5g0028921 Rosa chinensis HOM05D000173 ORTHO05D004400 1.8e-08 62.4 39 69.2
Atru.chr9.786 Acer truncatum HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
CANSAT35G1697 Cannabis sativa HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
Dinv07362 Davidia involucrata HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
Dinv40423 Davidia involucrata HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
Duzib168G1916 Durio zibethinus HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
Gorai.013G249800 Gossypium raimondii HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
Hma1.2p1_0340F.1_g129760 Hydrangea macrophylla HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 64.3
MD11G1273400 Malus domestica HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 64.3
Nn1g06280 Nelumbo nucifera HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 66.7
HPP92_025882 Vanilla planifolia HOM05D000173 ORTHO05D004400 2.3e-08 62.0 42 69.0
Actinidia35080 Actinidia chinensis HOM05D000173 ORTHO05D004400 3.0e-08 61.6 42 66.7
ATR0064G093 Amborella trichopoda HOM05D000173 ORTHO05D004400 3.0e-08 61.6 42 69.0
Migut.D01593 Erythranthe guttata HOM05D000173 ORTHO05D004400 3.0e-08 61.6 43 65.1
FvH4_3g17390 Fragaria vesca HOM05D000173 ORTHO05D004400 3.0e-08 61.6 39 66.7
FAN11G2015 Fragaria x ananassa HOM05D000173 ORTHO05D004400 3.0e-08 61.6 39 66.7
FAN16G2607 Fragaria x ananassa HOM05D000173 ORTHO05D004400 3.0e-08 61.6 39 66.7
FAN21G3174 Fragaria x ananassa HOM05D000173 ORTHO05D004400 3.0e-08 61.6 39 66.7
FAN25G2209 Fragaria x ananassa HOM05D000173 ORTHO05D004400 3.0e-08 61.6 39 66.7
QL10p023744 Quercus lobata HOM05D000173 ORTHO05D004400 3.0e-08 61.6 39 69.2
MSTRG.9268 Avicennia marina HOM05D000173 ORTHO05D004400 3.9e-08 61.2 43 65.1
CiPaw.15G127800 Carya illinoinensis HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 66.7
CiPaw.16G084900 Carya illinoinensis HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 66.7
Cc06_g15350 Coffea canephora HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 64.3
Lj9C429T7 Lonicera japonica HOM05D000173 ORTHO05D004400 3.9e-08 61.2 39 69.2
Lalb_Chr12g0210411 Lupinus albus HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 64.3
Oeu055898.1 Olea europaea HOM05D000173 ORTHO05D004400 3.9e-08 61.2 39 69.2
Peaxi162Scf00804g00008 Petunia axillaris HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 66.7
Potri.015G053100 Populus trichocarpa HOM05D000173 ORTHO05D004400 3.9e-08 61.2 39 69.2
PGR042G0409 Punica granatum HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 66.7
TWI81G0665 Tripterygium wilfordii HOM05D000173 ORTHO05D004400 3.9e-08 61.2 42 66.7
Ah.09g233670 Amaranthus hybridus HOM05D000173 ORTHO05D004400 5.1e-08 60.8 42 64.3
Cpa.g.sc13.24 Carica papaya HOM05D000173 ORTHO05D004400 5.1e-08 60.8 39 69.2
DCAR_011346 Daucus carota HOM05D000173 ORTHO05D004400 5.1e-08 60.8 39 69.2
Glyma.07G118800 Glycine max HOM05D000173 ORTHO05D004400 5.1e-08 60.8 42 64.3
Oeu024320.1 Olea europaea HOM05D000173 ORTHO05D004400 5.1e-08 60.8 37 73.0
Os08g0137200 Oryza sativa ssp. japonica HOM05D000173 ORTHO05D004400 5.1e-08 60.8 42 64.3
Hund24237 Selenicereus undatus HOM05D000173 ORTHO05D004400 5.1e-08 60.8 42 64.3
Sc04g0003650 Simmondsia chinensis HOM05D000173 ORTHO05D004400 5.1e-08 60.8 42 64.3
SGA_v2.0_scaffold62G21627 Striga asiatica HOM05D000173 ORTHO05D004400 5.1e-08 60.8 39 69.2
Duzib150G1369 Durio zibethinus HOM05D000173 ORTHO05D004400 6.7e-08 60.5 40 70.0
Glyma.03G107300 Glycine max HOM05D000173 ORTHO05D004400 6.7e-08 60.5 42 64.3
Glyma.08G040300 Glycine max HOM05D000173 ORTHO05D004400 6.7e-08 60.5 39 69.2
PGR083G2056 Punica granatum HOM05D000173 ORTHO05D004400 6.7e-08 60.5 46 60.9
Sabra15G0075200 Salix brachista HOM05D000173 ORTHO05D004400 6.7e-08 60.5 45 62.2
vmacro16454 Vaccinium macrocarpon HOM05D000173 ORTHO05D004400 6.7e-08 60.5 39 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3208 Anthoceros agrestis HOM05D000173 ORTHO05D004400 8.8e-08 60.1 39 64.1
ECA236G4399 Erigeron canadensis HOM05D000173 ORTHO05D004400 8.8e-08 60.1 39 66.7
AUR62025878 Chenopodium quinoa HOM05D000173 ORTHO05D004400 1.1e-07 59.7 39 66.7
Cc04_g07390 Coffea canephora HOM05D000173 ORTHO05D004400 1.1e-07 59.7 40 65.0
Lsat_1_v5_gn_8_109740 Lactuca sativa HOM05D000173 ORTHO05D004400 1.1e-07 59.7 39 66.7
Lalb_Chr05g0222631 Lupinus albus HOM05D000173 ORTHO05D004400 1.1e-07 59.7 42 66.7
SalBow5G1565 Salvia bowleyana HOM05D000173 ORTHO05D004400 1.1e-07 59.7 39 66.7
SalBow5G1673 Salvia bowleyana HOM05D000173 ORTHO05D004400 1.1e-07 59.7 39 66.7
Zm00001eb000800 Zea mays HOM05D000173 ORTHO05D004400 1.1e-07 59.7 42 61.9
PSO017G6263 Papaver somniferum HOM05D000173 ORTHO05D004400 1.5e-07 59.3 39 66.7
PSO063G4537 Papaver somniferum HOM05D000173 ORTHO05D004400 1.5e-07 59.3 39 66.7
Solyc12g037980.2 Solanum lycopersicum HOM05D000173 ORTHO05D004400 1.5e-07 59.3 42 64.3
Sopen12g017690 Solanum pennellii HOM05D000173 ORTHO05D004400 1.5e-07 59.3 42 64.3
PGSC0003DMG400021766 Solanum tuberosum HOM05D000173 ORTHO05D004400 1.5e-07 59.3 42 64.3
TWI15G1235 Tripterygium wilfordii HOM05D000173 ORTHO05D004400 1.5e-07 59.3 39 69.2
arahy.Tifrunner.gnm1.ann1.DFGQ2J Arachis hypogaea HOM05D000173 ORTHO05D004400 2.0e-07 58.9 42 64.3
Sp5g29110 Schrenkiella parvula HOM05D000173 ORTHO05D004400 2.0e-07 58.9 39 64.1
SMO347G0056 Selaginella moellendorffii HOM05D000173 ORTHO05D004400 2.0e-07 58.9 39 64.1
arahy.Tifrunner.gnm1.ann1.NI3B5C Arachis hypogaea HOM05D000173 ORTHO05D004400 2.6e-07 58.5 39 66.7
CSS0004352 Camellia sinensis var. sinensis HOM05D000173 ORTHO05D004400 2.6e-07 58.5 42 61.9
CSS0020862 Camellia sinensis var. sinensis HOM05D000173 ORTHO05D004400 2.6e-07 58.5 42 61.9
Eucgr.B00704 Eucalyptus grandis HOM05D000173 ORTHO05D004400 2.6e-07 58.5 42 61.9
HanXRQChr11g0323331 Helianthus annuus HOM05D000173 ORTHO05D004400 2.6e-07 58.5 39 64.1
MSTRG.4553 Avicennia marina HOM05D000173 ORTHO05D004400 3.3e-07 58.2 43 60.5
EL10Ac5g11421 Beta vulgaris HOM05D000173 ORTHO05D004400 3.3e-07 58.2 42 59.5
FvH4_6g50670 Fragaria vesca HOM05D000173 ORTHO05D004400 3.3e-07 58.2 39 69.2
FAN14G1259 Fragaria x ananassa HOM05D000173 ORTHO05D004400 3.3e-07 58.2 39 69.2
FAN14G3847 Fragaria x ananassa HOM05D000173 ORTHO05D004400 3.3e-07 58.2 39 69.2
THA.LOC104813899 Tarenaya hassleriana HOM05D000173 ORTHO05D004400 3.3e-07 58.2 39 61.5
Aa31LG7G3120 Aethionema arabicum HOM05D000173 ORTHO05D004400 5.7e-07 57.4 39 59.0
SGA_v2.0_scaffold192G40619 Striga asiatica HOM05D000173 ORTHO05D004400 5.7e-07 57.4 37 67.6
CBR_g46712 Chara braunii HOM05D000173 ORTHO05D004400 9.7e-07 56.6 39 61.5
Potri.012G061300 Populus trichocarpa HOM05D000173 ORTHO05D004400 9.7e-07 56.6 39 64.1
CBR_g46675 Chara braunii HOM05D000173 ORTHO05D004400 1.7e-06 55.8 39 59.0
Mapoly0063s0059 Marchantia polymorpha HOM05D000173 ORTHO05D004400 1.7e-06 55.8 39 59.0
Lalb_Chr07g0195271 Lupinus albus HOM05D000173 ORTHO05D004400 2.2e-06 55.5 38 68.4
AT1G18450 Arabidopsis thaliana HOM05D000173 ORTHO05D004400 2.8e-06 55.1 43 55.8
Thhalv10018569m.g Eutrema salsugineum HOM05D000173 ORTHO05D004400 2.8e-06 55.1 39 59.0
VMungo0698G0001 Vigna mungo HOM05D000173 ORTHO05D004400 2.8e-06 55.1 41 58.5
Carub.0001s1805 Capsella rubella HOM05D000173 ORTHO05D004400 8.2e-06 53.5 43 53.5
Carub.0001s1808 Capsella rubella HOM05D000173 ORTHO05D004400 8.2e-06 53.5 43 53.5
VMungo0251G1487 Vigna mungo HOM05D000173 ORTHO05D004400 8.2e-06 53.5 41 56.1


User provided reference genes

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