Gene: PGSC0003DMG400021766

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400021766
  • Transcript Identifier PGSC0003DMT400056033
  • Gene Type Coding gene
  • Location ST4.03ch12 : 41667676-41684372 : positive

Gene Family Information

  • ID HOM05D000173
  • #Genes/#Species 2168/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37449466
  • id PGSC0003DMG400021766.v4.03
  • uniprot M1BYV2

Descriptions

  • Description Conserved gene of unknown function
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043044
IBA
GOA DatabaseATP-dependent chromatin remodeling
GO:0043967
IBA
GOA Databasehistone H4 acetylation
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT1G18450
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT1G18450
GO:0006325
ISO
PLAZA Integrative Orthologychromatin organization AT1G18450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IBA
GOA Databasechromatin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G18450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035267
IBA
GOA DatabaseNuA4 histone acetyltransferase complex
GO:0016514
IBA
GOA DatabaseSWI/SNF complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G18450
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G18450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004000 Actin family
IPR043129 ATPase, nucleotide binding domain
Mapman id Description
12.3.1.1.5.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.component ARP4
12.4.4.7.1 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.SWR1/NuA4-complexes shared module.component ARP4