Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.1e-97 359.4 231 100.0
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 3.8e-14 82.8 107 48.6
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.1e-13 81.3 89 49.4
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 2.5e-13 80.1 107 46.7
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 2.5e-13 80.1 52 73.1
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 2.5e-13 80.1 70 62.9
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 4.2e-13 79.3 65 61.5
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 5.5e-13 79.0 52 69.2
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 9.3e-13 78.2 52 71.2
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 9.3e-13 78.2 49 73.5
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 1.2e-12 77.8 52 69.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 1.6e-12 77.4 90 46.7
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 2.1e-12 77.0 48 70.8
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 2.1e-12 77.0 51 70.6
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 2.7e-12 76.6 121 45.5
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 2.7e-12 76.6 47 72.3
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 3.5e-12 76.3 97 50.5
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 3.5e-12 76.3 49 71.4
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 3.5e-12 76.3 52 67.3
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 7.9e-12 75.1 105 43.8
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 1.0e-11 74.7 51 68.6
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 1.0e-11 74.7 49 71.4
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 1.3e-11 74.3 50 68.0
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.3e-11 74.3 51 68.6
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.3e-11 74.3 97 46.4
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.8e-11 73.9 52 65.4
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.8e-11 73.9 51 68.6
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.8e-11 73.9 49 69.4
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 2.3e-11 73.6 55 63.6
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 2.3e-11 73.6 51 66.7
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.3e-11 73.6 130 36.9
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.3e-11 73.6 49 65.3
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 3.0e-11 73.2 50 68.0
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 3.0e-11 73.2 117 46.2
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 3.0e-11 73.2 50 70.0
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 3.0e-11 73.2 52 67.3
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 3.0e-11 73.2 97 48.5
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 3.9e-11 72.8 108 41.7
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 3.9e-11 72.8 45 75.6
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 3.9e-11 72.8 100 46.0
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 5.1e-11 72.4 84 50.0
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 5.1e-11 72.4 51 66.7
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 5.1e-11 72.4 53 64.2
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 5.1e-11 72.4 112 44.6
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 8.7e-11 71.6 51 66.7
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 8.7e-11 71.6 111 42.3
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 1.1e-10 71.2 50 68.0
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.1e-10 71.2 84 44.0
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.1e-10 71.2 84 44.0
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.1e-10 71.2 84 44.0
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.1e-10 71.2 96 47.9
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.5e-10 70.9 52 67.3
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 1.9e-10 70.5 46 71.7
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.9e-10 70.5 90 44.4
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.9e-10 70.5 51 64.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.9e-10 70.5 106 43.4
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.9e-10 70.5 96 46.9
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 2.5e-10 70.1 109 41.3
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 2.5e-10 70.1 91 42.9
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 2.5e-10 70.1 96 44.8
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.5e-10 70.1 119 40.3
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 3.3e-10 69.7 51 64.7
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 3.3e-10 69.7 47 70.2
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 3.3e-10 69.7 111 40.5
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 4.3e-10 69.3 53 62.3
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 5.7e-10 68.9 113 40.7
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 5.7e-10 68.9 45 73.3
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 7.4e-10 68.6 105 42.9
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 7.4e-10 68.6 52 61.5
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 7.4e-10 68.6 103 40.8
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 9.7e-10 68.2 46 73.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 9.7e-10 68.2 46 73.9
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 9.7e-10 68.2 100 40.0
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.3e-09 67.8 99 43.4
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 1.3e-09 67.8 119 41.2
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.3e-09 67.8 118 42.4
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.3e-09 67.8 46 71.7
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.6e-09 67.4 52 61.5
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 1.6e-09 67.4 44 81.8
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.6e-09 67.4 49 67.3
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.2e-09 67.0 95 45.3
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 2.8e-09 66.6 46 71.7
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 2.8e-09 66.6 47 72.3
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 2.8e-09 66.6 97 42.3
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 4.8e-09 65.9 52 59.6
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 6.3e-09 65.5 109 44.0
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 6.3e-09 65.5 88 44.3
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 6.3e-09 65.5 53 62.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 8.2e-09 65.1 98 44.9
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 8.2e-09 65.1 93 46.2
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 8.2e-09 65.1 118 39.8
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 8.2e-09 65.1 85 45.9
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.1e-08 64.7 91 45.1
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.1e-08 64.7 91 45.1
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.1e-08 64.7 91 45.1
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.1e-08 64.7 52 61.5
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.1e-08 64.7 52 61.5
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.1e-08 64.7 52 61.5
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.1e-08 63.2 50 60.0
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 5.3e-08 62.4 45 64.4
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 5.3e-08 62.4 52 59.6
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 9.0e-08 61.6 46 67.4
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 3.4e-07 59.7 56 58.9
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.3e-06 57.8 39 71.8
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 5.0e-06 55.8 29 82.8


User provided reference genes

Program Settings