Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 3.5e-139 498.4 244 100.0
SEGI_12678 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 5.9e-46 188.7 118 78.0
SEGI_00592 Sequoiadendron giganteum HOM05D000522 ORTHO05D019803 2.3e-37 160.2 92 80.4
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 8.9e-34 148.3 144 47.2
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.6e-33 146.7 144 47.2
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 5.8e-33 145.6 144 45.8
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 3.7e-32 142.9 144 46.5
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.7e-32 142.9 152 47.4
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 6.4e-32 142.1 136 44.1
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 8.3e-32 141.7 137 49.6
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 8.3e-32 141.7 139 47.5
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 8.3e-32 141.7 136 44.1
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.1e-31 141.4 144 47.9
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.1e-31 141.4 152 47.4
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.1e-31 141.4 139 47.5
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 3.2e-31 139.8 144 45.8
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 3.2e-31 139.8 144 43.8
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 5.4e-31 139.0 144 43.8
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 7.1e-31 138.7 144 44.4
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 9.2e-31 138.3 144 43.8
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 9.2e-31 138.3 140 44.3
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 1.2e-30 137.9 144 43.8
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 2.1e-30 137.1 154 44.2
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 3.5e-30 136.3 144 44.4
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 3.5e-30 136.3 137 46.7
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 3.5e-30 136.3 144 45.1
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 4.6e-30 136.0 144 42.4
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 4.6e-30 136.0 144 43.8
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 6.0e-30 135.6 144 44.4
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 7.8e-30 135.2 140 43.6
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 7.8e-30 135.2 140 43.6
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 7.8e-30 135.2 144 43.8
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.0e-29 134.8 134 45.5
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 1.0e-29 134.8 170 41.8
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.3e-29 134.4 144 44.4
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-29 134.4 144 44.4
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-29 134.4 144 44.4
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.7e-29 134.0 154 41.6
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.7e-29 134.0 140 42.9
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.7e-29 134.0 140 42.9
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.7e-29 134.0 140 42.9
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.7e-29 134.0 144 43.1
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.7e-29 134.0 137 46.0
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.0e-29 133.3 144 44.4
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 3.0e-29 133.3 140 42.9
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 3.9e-29 132.9 140 42.9
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 3.9e-29 132.9 144 43.1
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 5.1e-29 132.5 144 43.1
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 5.1e-29 132.5 151 42.4
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 6.6e-29 132.1 159 41.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 6.6e-29 132.1 136 42.6
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 6.6e-29 132.1 144 43.1
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 8.6e-29 131.7 140 42.9
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 8.6e-29 131.7 140 42.9
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.5e-28 131.0 144 39.6
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.5e-28 131.0 144 39.6
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.5e-28 131.0 144 42.4
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 1.5e-28 131.0 137 46.0
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.9e-28 130.6 140 42.1
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.9e-28 130.6 175 41.7
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.9e-28 130.6 144 43.1
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.9e-28 130.6 144 43.1
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.9e-28 130.6 133 48.1
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.3e-28 129.8 144 42.4
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 3.3e-28 129.8 144 43.1
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.3e-28 129.4 140 45.0
SEGI_29225 Sequoiadendron giganteum HOM05D004253 ORTHO05D005013 4.3e-28 129.4 78 80.8
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 5.6e-28 129.0 144 40.3
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 5.6e-28 129.0 158 41.1
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 7.3e-28 128.6 140 41.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 9.5e-28 128.3 148 43.2
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.6e-27 127.5 144 42.4
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.6e-27 127.5 144 41.7
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.6e-27 127.5 144 41.7
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.1e-27 127.1 144 40.3
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 3.6e-27 126.3 144 41.0
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 4.7e-27 125.9 144 41.0
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 6.2e-27 125.6 144 41.0
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 8.1e-27 125.2 140 40.0
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 8.1e-27 125.2 144 41.0
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.4e-26 124.4 144 41.0
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.8e-26 124.0 156 41.7
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 3.1e-26 123.2 140 40.0
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 4.0e-26 122.9 144 41.0
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 4.0e-26 122.9 144 41.0
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 5.2e-26 122.5 144 40.3
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.2e-25 121.3 144 43.1
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.5e-25 120.9 137 41.6
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 2.6e-25 120.2 144 38.9
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 3.4e-25 119.8 140 39.3
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 2.7e-22 110.2 129 39.5
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 3.5e-22 109.8 144 37.5
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.5e-22 109.8 188 32.4
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 3.0e-21 106.7 132 41.7
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 1.5e-20 104.4 60 78.3
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.5e-20 103.6 161 36.6
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 4.3e-20 102.8 140 36.4
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 7.3e-20 102.1 103 42.7
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 9.6e-20 101.7 154 37.0
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 4.7e-19 99.4 76 69.7
SEGI_21139 Sequoiadendron giganteum HOM05D001354 ORTHO05D014520 2.9e-16 90.1 47 83.0
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 6.4e-16 89.0 120 40.8
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.1e-15 88.2 52 80.8
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.2e-15 86.3 102 41.2
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 2.1e-14 84.0 103 39.8
SEGI_18779 Sequoiadendron giganteum HOM05D016499 ORTHO05D015872 2.7e-14 83.6 87 50.6
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 3.5e-14 83.2 117 41.9
SEGI_25291 Sequoiadendron giganteum HOM05D003177 ORTHO05D003481 4.6e-14 82.8 72 54.2
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.5e-12 77.8 140 33.6
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 5.6e-12 75.9 73 47.9
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.6e-11 74.3 77 44.2
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.8e-11 73.6 63 50.8
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.8e-11 73.6 63 50.8
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 6.9e-10 68.9 63 47.6
SEGI_35501 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 2.0e-09 67.4 51 58.8
SEGI_41218 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 2.6e-09 67.0 49 59.2
SEGI_34109 Sequoiadendron giganteum HOM05D001613 ORTHO05D007209 9.9e-09 65.1 53 62.3
SEGI_14509 Sequoiadendron giganteum HOM05D002009 ORTHO05D006831 2.2e-08 63.9 49 53.1
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 2.9e-08 63.5 56 50.0
SEGI_03948 Sequoiadendron giganteum HOM05D005242 ORTHO05D000080 6.4e-08 62.4 45 60.0
SEGI_19921 Sequoiadendron giganteum HOM05D000599 ORTHO05D006883 1.2e-06 58.2 48 56.2
SEGI_24106 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 2.7e-06 57.0 43 58.1


User provided reference genes

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