Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08864 Sequoiadendron giganteum HOM05D002270 ORTHO05D012099 0.0e+00 1088.9 551 100.0
SEGI_39597 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.0e-303 1045.0 551 95.8
SEGI_33198 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.5e-189 666.8 337 99.7
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 7.4e-117 425.2 215 100.0
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 4.9e-76 289.7 544 35.7
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 9.2e-75 285.4 560 34.6
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 5.2e-70 269.6 563 34.3
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 5.2e-70 269.6 569 33.2
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.5e-69 268.1 577 33.1
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 3.7e-68 263.5 558 33.5
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 7.0e-67 259.2 579 32.5
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 1.6e-66 258.1 568 32.0
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 5.6e-64 249.6 572 32.2
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 7.5e-61 239.2 572 29.5
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 2.9e-60 237.3 544 31.6
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 3.7e-60 236.9 574 31.5
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 2.4e-59 234.2 544 29.0
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 2.4e-59 234.2 564 29.4
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 2.4e-59 234.2 555 29.7
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 4.1e-59 233.4 566 30.4
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.1e-58 231.1 582 29.2
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 2.7e-58 230.7 537 33.1
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 7.8e-58 229.2 567 30.0
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 7.8e-58 229.2 539 29.1
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.7e-57 228.0 546 30.2
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 3.9e-57 226.9 567 29.6
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 5.1e-57 226.5 567 29.8
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 8.6e-57 225.7 579 28.3
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 8.6e-57 225.7 561 31.0
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 1.5e-56 224.9 571 29.6
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.5e-56 224.9 551 28.3
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.5e-56 224.2 567 29.1
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 4.3e-56 223.4 579 28.2
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 5.6e-56 223.0 594 29.3
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 7.3e-56 222.6 559 29.7
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.2e-55 221.9 544 31.2
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 2.8e-55 220.7 560 29.8
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 4.7e-55 219.9 544 30.5
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 6.2e-55 219.5 573 29.8
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 6.8e-54 216.1 592 30.1
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 8.9e-54 215.7 549 30.1
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 8.9e-54 215.7 583 28.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 3.4e-53 213.8 568 28.9
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 4.4e-53 213.4 603 27.7
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.3e-52 211.8 547 32.7
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.7e-52 211.5 575 30.6
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 3.8e-52 210.3 568 29.4
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 6.4e-52 209.5 561 28.9
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 6.4e-52 209.5 577 30.2
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 8.4e-52 209.1 559 27.4
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.1e-51 208.8 559 27.0
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.4e-51 208.4 549 28.8
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 2.4e-51 207.6 553 30.6
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 3.2e-51 207.2 543 28.0
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 5.4e-51 206.5 531 30.5
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 5.4e-51 206.5 533 30.8
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 5.4e-51 206.5 544 28.9
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 7.1e-51 206.1 611 29.0
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.2e-50 205.3 553 28.4
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 3.5e-50 203.8 545 30.8
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.7e-49 201.4 544 30.5
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 2.3e-49 201.1 555 27.7
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 3.9e-49 200.3 545 30.8
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 3.9e-49 200.3 562 29.0
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 5.1e-49 199.9 561 29.6
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 6.6e-49 199.5 575 29.6
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 1.1e-48 198.7 574 29.1
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 1.9e-48 198.0 540 30.6
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 5.6e-48 196.4 600 27.5
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 9.6e-48 195.7 569 26.5
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 9.6e-48 195.7 579 28.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.8e-47 194.1 563 28.6
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 4.7e-47 193.4 533 29.6
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 4.7e-47 193.4 547 28.0
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 6.2e-47 193.0 546 28.9
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 6.2e-47 193.0 552 30.4
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 8.1e-47 192.6 564 28.5
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.1e-46 192.2 564 28.4
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.4e-46 191.8 583 29.8
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.8e-46 191.4 564 28.4
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.4e-46 191.0 539 28.2
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 5.2e-46 189.9 554 26.9
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 9.9e-45 185.7 542 26.6
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.7e-44 184.9 555 28.1
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.2e-44 184.5 571 28.4
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 3.8e-44 183.7 459 29.2
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 6.4e-44 183.0 541 28.8
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 8.4e-44 182.6 587 27.8
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 8.4e-44 182.6 546 28.8
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 1.4e-43 181.8 575 25.6
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.9e-43 181.4 564 28.4
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.9e-43 181.4 563 29.5
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 7.1e-43 179.5 657 27.5
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.9e-41 173.7 562 28.5
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 6.6e-41 172.9 561 28.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.6e-41 172.9 561 28.0
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.1e-40 172.2 563 28.8
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.1e-40 172.2 557 28.5
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 4.8e-39 166.8 500 26.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 6.2e-39 166.4 566 27.2
Cpa.g.sc1872.2 Carica papaya HOM05D002270 ORTHO05D002866 3.2e-35 154.1 442 28.7
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 6.0e-34 149.8 489 27.4
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.3e-33 148.7 553 25.3
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 7.4e-32 142.9 569 27.1
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 4.8e-31 140.2 555 25.4
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 8.1e-31 139.4 568 25.2
SHI16818 Sapria himalayana HOM05D002270 ORTHO05D012099 9.3e-27 125.9 336 29.8
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 4.6e-26 123.6 563 25.0
BolC5t32597H Brassica oleracea HOM05D002270 ORTHO05D002866 4.6e-26 123.6 563 25.0
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 1.1e-24 119.0 563 24.9
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 1.4e-19 102.1 199 32.7
PSO675G5403 Papaver somniferum HOM05D010434 ORTHO05D012099 1.9e-19 101.7 394 25.9
PSO675G8751 Papaver somniferum HOM05D010434 ORTHO05D012099 4.2e-19 100.5 427 24.6
PSO541G0642 Papaver somniferum HOM05D010434 ORTHO05D012099 5.5e-19 100.1 394 25.6
PSO675G5043 Papaver somniferum HOM05D010434 ORTHO05D012099 1.3e-17 95.5 500 23.2
PSO675G7191 Papaver somniferum HOM05D010434 ORTHO05D012099 1.1e-16 92.4 406 25.1
Nn5g26982 Nelumbo nucifera HOM05D002270 ORTHO05D012099 1.5e-16 92.0 155 38.1
PSO541G6407 Papaver somniferum HOM05D010434 ORTHO05D012099 6.3e-15 86.7 397 24.7
PSO675G7526 Papaver somniferum HOM05D010434 ORTHO05D012099 8.2e-15 86.3 449 24.5
PSO675G1207 Papaver somniferum HOM05D010434 ORTHO05D012099 4.5e-13 80.5 393 23.7
PSO675G4518 Papaver somniferum HOM05D010434 ORTHO05D012099 4.5e-13 80.5 386 24.4
PSO675G8523 Papaver somniferum HOM05D010434 ORTHO05D012099 5.0e-12 77.0 341 23.2
Cpa.g.sc30.6 Carica papaya HOM05D002270 ORTHO05D002866 1.1e-11 75.9 166 34.3
Rhsim04G0127600 Rhododendron simsii HOM05D002270 ORTHO05D012099 2.5e-11 74.7 155 30.3
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 3.2e-11 74.3 150 30.7
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 4.6e-10 70.5 558 19.7
ECA067G0003 Erigeron canadensis HOM05D002270 ORTHO05D002866 4.3e-08 63.9 145 31.7
PSO017G6479 Papaver somniferum HOM05D010434 ORTHO05D012099 5.7e-08 63.5 165 31.5
COL.COLO4_12565 Corchorus olitorius HOM05D002270 ORTHO05D002866 2.8e-07 61.2 74 47.3
MBI05_g33098_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D030055 2.8e-07 61.2 94 37.2
Aqoxy6G02935 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 6.3e-07 60.1 232 24.6
PSO407G0222 Papaver somniferum HOM05D010434 ORTHO05D012099 4.1e-06 57.4 118 31.4


User provided reference genes

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