Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08425 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 1.4e-56 222.6 106 100.0
ATR0602G179 Amborella trichopoda HOM05D005474 ORTHO05D006551 2.8e-28 128.6 66 87.9
MBI06_g08456_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 4.7e-28 127.9 66 86.4
Cc08_g16070 Coffea canephora HOM05D005474 ORTHO05D006551 6.2e-28 127.5 64 87.5
HPP92_026770 Vanilla planifolia HOM05D005474 ORTHO05D006551 6.2e-28 127.5 66 86.4
vmacro11424 Vaccinium macrocarpon HOM05D005474 ORTHO05D006551 8.0e-28 127.1 66 84.8
PSO063G4762 Papaver somniferum HOM05D005474 ORTHO05D006551 1.4e-27 126.3 66 84.8
PSO170G1345 Papaver somniferum HOM05D005474 ORTHO05D006551 1.4e-27 126.3 66 84.8
Rhsim02G0243400 Rhododendron simsii HOM05D005474 ORTHO05D006551 1.4e-27 126.3 66 83.3
Atru.chr9.1979 Acer truncatum HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 84.8
Atru.chr9.1994 Acer truncatum HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 84.8
Cfa012014 Carpinus fangiana HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 83.3
Haze_09055 Corylus avellana HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 83.3
Nitab4.5_0002782g0080 Nicotiana tabacum HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 84.8
QL02p030435 Quercus lobata HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 83.3
Sed0020716 Sechium edule HOM05D005474 ORTHO05D006551 1.8e-27 125.9 66 84.8
BcaC09g50941 Brassica carinata HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 83.3
A01p15160 Brassica napus HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 83.3
C01p19060 Brassica napus HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 83.3
BolC1t01832H Brassica oleracea HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 83.3
BraA01t01454Z Brassica rapa HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 83.3
Sed0014344 Sechium edule HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 84.8
TAR629G2557 Trochodendron aralioides HOM05D005474 ORTHO05D006551 3.1e-27 125.2 66 83.3
CiPaw.11G121500 Carya illinoinensis HOM05D005474 ORTHO05D006551 4.0e-27 124.8 66 83.3
ClCG01G001840 Citrullus lanatus HOM05D005474 ORTHO05D006551 4.0e-27 124.8 66 83.3
MELO3C005754.2 Cucumis melo HOM05D005474 ORTHO05D006551 4.0e-27 124.8 66 83.3
CsaV3_5G001990 Cucumis sativus L. HOM05D005474 ORTHO05D006551 4.0e-27 124.8 66 83.3
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 4.0e-27 124.8 66 83.3
Hma1.2p1_1746F.1_g300390 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 4.0e-27 124.8 62 90.3
Hma1.2p1_1746F.1_g300398 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 4.0e-27 124.8 62 90.3
Os06g0529800 Oryza sativa ssp. japonica HOM05D005474 ORTHO05D006551 4.0e-27 124.8 64 87.5
BcaNung01092 Brassica carinata HOM05D005474 ORTHO05D006551 5.2e-27 124.4 66 83.3
Mapoly0095s0049 Marchantia polymorpha HOM05D005474 ORTHO05D006551 5.2e-27 124.4 66 81.8
CSS0001924 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 6.8e-27 124.0 66 83.3
Ciclev10020308m.g Citrus clementina HOM05D005474 ORTHO05D006551 6.8e-27 124.0 66 83.3
RcHm_v2.0_Chr7g0194791 Rosa chinensis HOM05D005474 ORTHO05D006551 6.8e-27 124.0 66 83.3
SalBow1G1678 Salvia bowleyana HOM05D005474 ORTHO05D006551 8.9e-27 123.6 66 81.8
SalBow1G8106 Salvia bowleyana HOM05D005474 ORTHO05D006551 8.9e-27 123.6 66 81.8
CAN.G532.121 Capsicum annuum HOM05D005474 ORTHO05D006551 1.2e-26 123.2 64 84.4
FvH4_5g04600 Fragaria vesca HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
FAN04G1263 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
FAN08G2748 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
FAN13G0565 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
Lsat_1_v5_gn_6_83981 Lactuca sativa HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
MD14G1128900 Malus domestica HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
Nn3g19016 Nelumbo nucifera HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 83.3
PGSC0003DMG400012286 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.2e-26 123.2 64 84.4
TWI12G0204 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 1.2e-26 123.2 66 81.8
Actinidia22160 Actinidia chinensis HOM05D005474 ORTHO05D006551 1.5e-26 122.9 66 81.8
Glyma.11G017200 Glycine max HOM05D005474 ORTHO05D006551 1.5e-26 122.9 66 81.8
Prupe.5G120100 Prunus persica HOM05D005474 ORTHO05D006551 1.5e-26 122.9 66 81.8
TAR374G0037 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.5e-26 122.9 66 81.8
CSS0018913 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.0e-26 122.5 66 81.8
Lj2C167G11 Lonicera japonica HOM05D005474 ORTHO05D006551 2.0e-26 122.5 66 81.8
PGR042G2806 Punica granatum HOM05D005474 ORTHO05D006551 2.0e-26 122.5 66 80.3
Psat2g185600 Pisum sativum HOM05D005474 ORTHO05D006551 2.6e-26 122.1 66 80.3
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 3.4e-26 121.7 66 80.3
Glyma.01G225700 Glycine max HOM05D005474 ORTHO05D006551 3.4e-26 121.7 64 82.8
Gohir.A12G236400 Gossypium hirsutum HOM05D005474 ORTHO05D006551 3.4e-26 121.7 66 78.8
Gohir.D12G237600 Gossypium hirsutum HOM05D005474 ORTHO05D006551 3.4e-26 121.7 66 78.8
Gorai.008G254400 Gossypium raimondii HOM05D005474 ORTHO05D006551 3.4e-26 121.7 66 78.8
Oeu063522.1 Olea europaea HOM05D005474 ORTHO05D006551 3.4e-26 121.7 64 81.2
unitig_0.g387 Utricularia gibba HOM05D005474 ORTHO05D006551 3.4e-26 121.7 64 81.2
Thecc.03G298100 Theobroma cacao HOM05D005474 ORTHO05D006551 4.4e-26 121.3 66 78.8
TPR.G25600 Trifolium pratense HOM05D005474 ORTHO05D006551 4.4e-26 121.3 66 77.3
CANSAT21G1635 Cannabis sativa HOM05D005474 ORTHO05D006551 5.8e-26 120.9 66 78.8
CDE02G2859 Ceratophyllum demersum HOM05D002290 ORTHO05D002532 5.8e-26 120.9 64 85.9
Ca_24501_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 5.8e-26 120.9 64 81.2
Ca_29734_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 5.8e-26 120.9 64 81.2
Migut.E01253 Erythranthe guttata HOM05D005474 ORTHO05D006551 5.8e-26 120.9 64 81.2
Lalb_Chr05g0211531 Lupinus albus HOM05D005474 ORTHO05D006551 5.8e-26 120.9 66 80.3
Medtr5g009240 Medicago truncatula HOM05D005474 ORTHO05D006551 5.8e-26 120.9 64 81.2
Sc22g0005000 Simmondsia chinensis HOM05D005474 ORTHO05D006551 5.8e-26 120.9 66 80.3
Aa31LG6G7070 Aethionema arabicum HOM05D005474 ORTHO05D006551 7.5e-26 120.6 66 78.8
arahy.Tifrunner.gnm1.ann1.Z0ACGZ Arachis hypogaea HOM05D005474 ORTHO05D006551 7.5e-26 120.6 68 76.5
Phvul.002G164600 Phaseolus vulgaris HOM05D005474 ORTHO05D006551 7.5e-26 120.6 64 81.2
Sopen08g030580 Solanum pennellii HOM05D005474 ORTHO05D006551 7.5e-26 120.6 64 82.8
THA.LOC104806435 Tarenaya hassleriana HOM05D005474 ORTHO05D006551 7.5e-26 120.6 66 78.8
TWI56G1439 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 7.5e-26 120.6 64 81.2
Potri.001G091600 Populus trichocarpa HOM05D005474 ORTHO05D006551 9.8e-26 120.2 66 78.8
VMungo1215G0769 Vigna mungo HOM05D005474 ORTHO05D006551 9.8e-26 120.2 64 81.2
GSVIVG01019532001 Vitis vinifera HOM05D005474 ORTHO05D006551 9.8e-26 120.2 66 81.8
SalBow8G3265 Salvia bowleyana HOM05D005474 ORTHO05D006551 1.3e-25 119.8 64 79.7
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 1.3e-25 119.8 64 79.7
Zm00001eb277940 Zea mays HOM05D005474 ORTHO05D006551 1.3e-25 119.8 66 81.8
MSTRG.13885 Avicennia marina HOM05D005474 ORTHO05D006551 1.7e-25 119.4 64 79.7
Cpa.g.sc128.67 Carica papaya HOM05D005474 ORTHO05D006551 1.7e-25 119.4 66 78.8
COL.COLO4_10702 Corchorus olitorius HOM05D005474 ORTHO05D006551 1.7e-25 119.4 66 77.3
Duzib084G0281 Durio zibethinus HOM05D005474 ORTHO05D006551 1.7e-25 119.4 66 77.3
Manes.01G049100 Manihot esculenta HOM05D005474 ORTHO05D006551 1.7e-25 119.4 66 80.3
Aqoxy7G00102 Aquilegia oxysepala HOM05D005474 ORTHO05D006551 2.2e-25 119.0 66 77.3
Duzib084G1138 Durio zibethinus HOM05D005474 ORTHO05D006551 2.2e-25 119.0 93 61.3
MD06G1107100 Malus domestica HOM05D005474 ORTHO05D006551 2.2e-25 119.0 66 78.8
Pp3c7_4800 Physcomitrium patens HOM05D005474 ORTHO05D006551 2.2e-25 119.0 66 80.3
Potri.003G140000 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.9e-25 118.6 66 77.3
Sabra03G0101000 Salix brachista HOM05D005474 ORTHO05D006551 2.9e-25 118.6 66 77.3
Sp7g21810 Schrenkiella parvula HOM05D005474 ORTHO05D006551 2.9e-25 118.6 66 77.3
CARHR231240 Cardamine hirsuta HOM05D005474 ORTHO05D006551 4.9e-25 117.9 66 75.8
Lalb_Chr16g0376951 Lupinus albus HOM05D005474 ORTHO05D006551 6.4e-25 117.5 64 79.7
AL7G29500 Arabidopsis lyrata HOM05D005474 ORTHO05D006551 8.3e-25 117.1 66 75.8
Eucgr.D01738 Eucalyptus grandis HOM05D005474 ORTHO05D006551 8.3e-25 117.1 66 77.3
Thhalv10025382m.g Eutrema salsugineum HOM05D005474 ORTHO05D006551 8.3e-25 117.1 66 77.3
Solyc08g082320.3 Solanum lycopersicum HOM05D005474 ORTHO05D006551 8.3e-25 117.1 64 81.2
CSS0004779 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 1.4e-24 116.3 66 78.8
LjContig00312_ERROPOS870357g0016174 Lotus japonicus HOM05D005474 ORTHO05D006551 1.9e-24 115.9 64 79.7
Pp3c18_8230 Physcomitrium patens HOM05D005474 ORTHO05D006551 1.9e-24 115.9 66 78.8
CiPaw.12G083000 Carya illinoinensis HOM05D005474 ORTHO05D006551 2.4e-24 115.5 66 74.2
AT4G23860 Arabidopsis thaliana HOM05D005474 ORTHO05D006551 3.2e-24 115.2 66 74.2
ECA240G1977 Erigeron canadensis HOM05D005474 ORTHO05D006551 3.2e-24 115.2 66 77.3
Sabra01G0068000 Salix brachista HOM05D005474 ORTHO05D006551 3.2e-24 115.2 70 75.7
Carub.0007s1727 Capsella rubella HOM05D005474 ORTHO05D006551 5.4e-24 114.4 66 74.2
Hund14220 Selenicereus undatus HOM05D005474 ORTHO05D006551 5.4e-24 114.4 66 71.2
SMO200G0193 Selaginella moellendorffii HOM05D005474 ORTHO05D006551 9.2e-24 113.6 66 74.2
AUR62010840 Chenopodium quinoa HOM05D005474 ORTHO05D006551 1.6e-23 112.8 66 69.7
AUR62019839 Chenopodium quinoa HOM05D005474 ORTHO05D006551 1.6e-23 112.8 66 69.7
EL10Ac5g12915 Beta vulgaris HOM05D005474 ORTHO05D006551 2.7e-23 112.1 66 69.7
HanXRQChr03g0083521 Helianthus annuus HOM05D005474 ORTHO05D006551 2.7e-23 112.1 53 92.5
CSS0034140 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 4.6e-23 111.3 53 90.6
PGSC0003DMG401028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 7.8e-23 110.5 61 80.3
TAR636G0569 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.3e-22 109.8 65 76.9
Peaxi162Scf00074g00931 Petunia axillaris HOM05D005474 ORTHO05D006551 1.7e-22 109.4 53 88.7
arahy.Tifrunner.gnm1.ann1.1UFI8K Arachis hypogaea HOM05D005474 ORTHO05D006551 6.6e-22 107.5 55 81.8
SHI06991 Sapria himalayana HOM05D005474 ORTHO05D006551 4.3e-21 104.8 54 83.3
CDE08G0829 Ceratophyllum demersum HOM05D005474 ORTHO05D006551 7.1e-16 87.4 50 80.0
CBR_g50475 Chara braunii HOM05D005474 ORTHO05D006551 1.0e-14 83.6 67 56.7
Oeu034333.1 Olea europaea HOM05D005474 ORTHO05D006551 8.9e-11 70.5 33 87.9
CSS0021446 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.4e-08 62.4 30 83.3
PSO017G5523 Papaver somniferum HOM05D005474 ORTHO05D006551 2.1e-07 59.3 33 75.8


User provided reference genes

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