Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08033 Sequoiadendron giganteum HOM05D006021 ORTHO05D007747 8.5e-57 223.4 109 100.0
Duzib106G0269 Durio zibethinus HOM05D006021 ORTHO05D007747 4.3e-16 88.2 92 54.3
Manes.10G031500 Manihot esculenta HOM05D006021 ORTHO05D007747 4.3e-16 88.2 92 52.2
Dinv26002 Davidia involucrata HOM05D006021 ORTHO05D007747 1.2e-15 86.7 92 54.3
Migut.F01631 Erythranthe guttata HOM05D006021 ORTHO05D007747 1.2e-15 86.7 92 52.2
Peaxi162Scf00015g00149 Petunia axillaris HOM05D006021 ORTHO05D007747 1.6e-15 86.3 92 53.3
Lj1g0022473 Lotus japonicus HOM05D006021 ORTHO05D007747 2.1e-15 85.9 93 48.4
vmacro10241 Vaccinium macrocarpon HOM05D006021 ORTHO05D007747 2.1e-15 85.9 92 55.4
Cc02_g08000 Coffea canephora HOM05D006021 ORTHO05D007747 2.8e-15 85.5 92 51.1
Migut.F01499 Erythranthe guttata HOM05D006021 ORTHO05D007747 2.8e-15 85.5 92 52.2
Oeu059724.1 Olea europaea HOM05D006021 ORTHO05D007747 2.8e-15 85.5 95 54.7
Actinidia29224 Actinidia chinensis HOM05D006021 ORTHO05D007747 4.7e-15 84.7 92 54.3
Thhalv10016771m.g Eutrema salsugineum HOM05D006021 ORTHO05D007747 6.1e-15 84.3 93 52.7
PGR044G0630 Punica granatum HOM05D006021 ORTHO05D007747 6.1e-15 84.3 92 50.0
SGA_v2.0_scaffold108G31009 Striga asiatica HOM05D006021 ORTHO05D002218 8.0e-15 84.0 92 50.0
TPR.G15521 Trifolium pratense HOM05D006021 ORTHO05D007747 8.0e-15 84.0 93 50.5
CAN.G1013.12 Capsicum annuum HOM05D006021 ORTHO05D007747 1.0e-14 83.6 92 52.2
Thecc.10G044200 Theobroma cacao HOM05D006021 ORTHO05D007747 1.8e-14 82.8 92 51.1
Ciclev10031583m.g Citrus clementina HOM05D006021 ORTHO05D007747 2.3e-14 82.4 92 50.0
MBI05_g22898_MAGBIO Magnolia biondii HOM05D006021 ORTHO05D007747 2.3e-14 82.4 92 48.9
MBI05_g44084_MAGBIO Magnolia biondii HOM05D006021 ORTHO05D007747 2.3e-14 82.4 92 48.9
Medtr7g024540 Medicago truncatula HOM05D006021 ORTHO05D007747 2.3e-14 82.4 93 48.4
Atru.chr12.463 Acer truncatum HOM05D006021 ORTHO05D007747 4.0e-14 81.6 91 49.5
Atru.chr12.485 Acer truncatum HOM05D006021 ORTHO05D007747 4.0e-14 81.6 91 49.5
CiPaw.02G183200 Carya illinoinensis HOM05D006021 ORTHO05D007747 4.0e-14 81.6 92 47.8
ClCG09G019960 Citrullus lanatus HOM05D006021 ORTHO05D007747 4.0e-14 81.6 91 47.3
COL.COLO4_14996 Corchorus olitorius HOM05D006021 ORTHO05D007747 4.0e-14 81.6 92 51.1
DCAR_012451 Daucus carota HOM05D006021 ORTHO05D007747 4.0e-14 81.6 91 49.5
Os01g0150100 Oryza sativa ssp. japonica HOM05D006021 ORTHO05D007747 4.0e-14 81.6 92 47.8
QL08p059185 Quercus lobata HOM05D006021 ORTHO05D007747 4.0e-14 81.6 92 47.8
Cfa001493 Carpinus fangiana HOM05D006021 ORTHO05D007747 5.2e-14 81.3 92 47.8
Aqoxy2G02096 Aquilegia oxysepala HOM05D006021 ORTHO05D007747 6.8e-14 80.9 95 47.4
HanXRQChr14g0458171 Helianthus annuus HOM05D006021 ORTHO05D007747 6.8e-14 80.9 92 47.8
RcHm_v2.0_Chr1g0366501 Rosa chinensis HOM05D006021 ORTHO05D007747 6.8e-14 80.9 95 45.3
AL4G36960 Arabidopsis lyrata HOM05D006021 ORTHO05D007747 8.9e-14 80.5 92 51.1
Gohir.A10G216800 Gossypium hirsutum HOM05D006021 ORTHO05D007747 8.9e-14 80.5 92 47.8
Gorai.011G256900 Gossypium raimondii HOM05D006021 ORTHO05D007747 8.9e-14 80.5 93 49.5
BcaB02g09111 Brassica carinata HOM05D006021 ORTHO05D007747 1.2e-13 80.1 92 51.1
CANSAT56G3892 Cannabis sativa HOM05D006021 ORTHO05D007747 1.2e-13 80.1 93 46.2
Ca_07253_v3 Cicer arietinum L. HOM05D006021 ORTHO05D007747 1.2e-13 80.1 90 50.0
Lalb_Chr10g0091731 Lupinus albus HOM05D006021 ORTHO05D007747 1.2e-13 80.1 88 48.9
PGSC0003DMG400023528 Solanum tuberosum HOM05D006021 ORTHO05D007747 1.2e-13 80.1 92 51.1
Nitab4.5_0006095g0010 Nicotiana tabacum HOM05D006021 ORTHO05D007747 1.5e-13 79.7 96 52.1
Lj1C935G17 Lonicera japonica HOM05D006021 ORTHO05D007747 2.0e-13 79.3 93 48.4
Solyc05g054520.4 Solanum lycopersicum HOM05D006021 ORTHO05D007747 2.0e-13 79.3 92 52.2
GSVIVG01016534001 Vitis vinifera HOM05D006021 ORTHO05D007747 2.0e-13 79.3 92 48.9
C04p08110 Brassica napus HOM05D006021 ORTHO05D007747 2.6e-13 79.0 92 50.0
BolC4t22421H Brassica oleracea HOM05D006021 ORTHO05D007747 2.6e-13 79.0 92 50.0
Cpa.g.sc1.396 Carica papaya HOM05D006021 ORTHO05D007747 2.6e-13 79.0 92 48.9
Glyma.02G093000 Glycine max HOM05D006021 ORTHO05D007747 2.6e-13 79.0 93 46.2
Gohir.D10G225700 Gossypium hirsutum HOM05D006021 ORTHO05D007747 2.6e-13 79.0 92 48.9
Psat3g181400 Pisum sativum HOM05D006021 ORTHO05D007747 2.6e-13 79.0 92 48.9
CSS0040652 Camellia sinensis var. sinensis HOM05D006021 ORTHO05D007747 3.4e-13 78.6 92 50.0
Eucgr.J00022 Eucalyptus grandis HOM05D006021 ORTHO05D007747 3.4e-13 78.6 92 46.7
Glyma.18G289300 Glycine max HOM05D006021 ORTHO05D007747 3.4e-13 78.6 93 46.2
TAR636G1861 Trochodendron aralioides HOM05D006021 ORTHO05D007747 3.4e-13 78.6 92 47.8
Dinv31447 Davidia involucrata HOM05D006021 ORTHO05D007747 4.4e-13 78.2 95 46.3
Nn2g10394 Nelumbo nucifera HOM05D006021 ORTHO05D007747 4.4e-13 78.2 91 47.3
Sopen05g033000 Solanum pennellii HOM05D006021 ORTHO05D007747 4.4e-13 78.2 92 51.1
TWI63G0178 Tripterygium wilfordii HOM05D006021 ORTHO05D007747 5.8e-13 77.8 92 45.7
Carub.0004s2162 Capsella rubella HOM05D006021 ORTHO05D007747 7.5e-13 77.4 93 47.3
SalBow6G7105 Salvia bowleyana HOM05D006021 ORTHO05D007747 7.5e-13 77.4 92 46.7
Sed0015354 Sechium edule HOM05D006021 ORTHO05D007747 7.5e-13 77.4 92 45.7
AT2G39550 Arabidopsis thaliana HOM05D006021 ORTHO05D007747 9.8e-13 77.0 92 50.0
A05p06840 Brassica napus HOM05D006021 ORTHO05D007747 9.8e-13 77.0 92 48.9
CsaV3_5G026490 Cucumis sativus L. HOM05D006021 ORTHO05D007747 9.8e-13 77.0 92 45.7
Rhsim09G0165400 Rhododendron simsii HOM05D006021 ORTHO05D007747 9.8e-13 77.0 92 48.9
Sp4g21840 Schrenkiella parvula HOM05D006021 ORTHO05D007747 9.8e-13 77.0 93 49.5
Hund12509 Selenicereus undatus HOM05D006021 ORTHO05D007747 9.8e-13 77.0 93 45.2
ATR0559G127 Amborella trichopoda HOM05D006021 ORTHO05D007747 1.3e-12 76.6 92 45.7
arahy.Tifrunner.gnm1.ann1.53WLRG Arachis hypogaea HOM05D006021 ORTHO05D007747 1.3e-12 76.6 93 43.0
arahy.Tifrunner.gnm1.ann1.G8Y61E Arachis hypogaea HOM05D006021 ORTHO05D007747 1.3e-12 76.6 93 43.0
BraA05t19650Z Brassica rapa HOM05D006021 ORTHO05D007747 1.7e-12 76.3 92 48.9
MELO3C021654.2 Cucumis melo HOM05D006021 ORTHO05D007747 1.7e-12 76.3 92 45.7
Aa31LG5G20070 Aethionema arabicum HOM05D006021 ORTHO05D007747 2.2e-12 75.9 92 45.7
Nitab4.5_0006262g0010 Nicotiana tabacum HOM05D006021 ORTHO05D007747 2.2e-12 75.9 96 50.0
BcaC02g12082 Brassica carinata HOM05D006021 ORTHO05D007747 2.9e-12 75.5 92 48.9
CARHR134420 Cardamine hirsuta HOM05D006021 ORTHO05D007747 2.9e-12 75.5 96 46.9
Potri.008G054500 Populus trichocarpa HOM05D006021 ORTHO05D007747 2.9e-12 75.5 92 46.7
TWI15G0276 Tripterygium wilfordii HOM05D006021 ORTHO05D007747 3.7e-12 75.1 92 44.6
VMungo1383G0472 Vigna mungo HOM05D006021 ORTHO05D007747 6.4e-12 74.3 93 41.9
Potri.010G206001 Populus trichocarpa HOM05D006021 ORTHO05D007747 8.3e-12 73.9 92 46.7
ECA238G0092 Erigeron canadensis HOM05D006021 ORTHO05D007747 1.4e-11 73.2 94 47.9
PSO339G2275 Papaver somniferum HOM05D006021 ORTHO05D007747 1.4e-11 73.2 92 44.6
THA.LOC104824271 Tarenaya hassleriana HOM05D006021 ORTHO05D007747 1.4e-11 73.2 92 46.7
Phvul.008G012800 Phaseolus vulgaris HOM05D006021 ORTHO05D007747 2.4e-11 72.4 93 41.9
Sabra08G0039300 Salix brachista HOM05D006021 ORTHO05D007747 2.4e-11 72.4 92 44.6
PSO151G0110 Papaver somniferum HOM05D006021 ORTHO05D007747 3.2e-11 72.0 96 42.7
AUR62038353 Chenopodium quinoa HOM05D006021 ORTHO05D007747 4.1e-11 71.6 92 44.6
MD01G1126400 Malus domestica HOM05D006021 ORTHO05D007747 7.0e-11 70.9 93 46.2
FAN06G5027 Fragaria x ananassa HOM05D006021 ORTHO05D007747 9.2e-11 70.5 92 46.7
FvH4_7g22110 Fragaria vesca HOM05D006021 ORTHO05D007747 1.6e-10 69.7 92 47.8
Zm00001eb124350 Zea mays HOM05D006021 ORTHO05D007747 1.6e-10 69.7 96 42.7
EL10Ac2g03391 Beta vulgaris HOM05D006021 ORTHO05D007747 2.0e-10 69.3 92 43.5
Hma1.2p1_0683F.1_g202880 Hydrangea macrophylla HOM05D006021 ORTHO05D007747 2.0e-10 69.3 66 54.5
Sc20g0002660 Simmondsia chinensis HOM05D006021 ORTHO05D007747 2.7e-10 68.9 91 45.1
CDE09G0613 Ceratophyllum demersum HOM05D006021 ORTHO05D007747 3.5e-10 68.6 89 37.1
FAN03G1562 Fragaria x ananassa HOM05D006021 ORTHO05D007747 3.5e-10 68.6 91 46.2
Pp3c5_25290 Physcomitrium patens HOM05D006021 ORTHO05D007747 3.5e-10 68.6 99 40.4
AUR62041863 Chenopodium quinoa HOM05D006021 ORTHO05D007747 4.6e-10 68.2 92 43.5
Mapoly0010s0084 Marchantia polymorpha HOM05D006021 ORTHO05D007747 4.6e-10 68.2 94 42.6
AagrBONN_evm.TU.Sc2ySwM_362.2940 Anthoceros agrestis HOM05D006021 ORTHO05D007747 7.8e-10 67.4 94 39.4
FAN01G2389 Fragaria x ananassa HOM05D006021 ORTHO05D007747 7.8e-10 67.4 92 45.7
MD07G1196300 Malus domestica HOM05D006021 ORTHO05D007747 7.8e-10 67.4 94 44.7
HPP92_001683 Vanilla planifolia HOM05D006021 ORTHO05D007747 1.3e-09 66.6 91 39.6
FAN10G0846 Fragaria x ananassa HOM05D006021 ORTHO05D007747 2.3e-09 65.9 91 45.1
Lsat_1_v5_gn_2_119720 Lactuca sativa HOM05D006021 ORTHO05D007747 5.0e-09 64.7 126 36.5
Prupe.2G233300 Prunus persica HOM05D006021 ORTHO05D007747 5.0e-09 64.7 96 42.7
Oeu011120.1 Olea europaea HOM05D006021 ORTHO05D007747 1.9e-08 62.8 76 51.3
unitig_736.g22256 Utricularia gibba HOM05D006021 ORTHO05D007747 5.6e-08 61.2 65 52.3
Ah.16g107030 Amaranthus hybridus HOM05D006021 ORTHO05D007747 9.5e-08 60.5 43 67.4
FAN01G3064 Fragaria x ananassa HOM05D006021 ORTHO05D007747 9.5e-08 60.5 68 51.5
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 2.1e-07 59.3 67 49.3
SHI22569 Sapria himalayana HOM05D006021 ORTHO05D007747 1.1e-06 57.0 90 36.7
SMO116G0097 Selaginella moellendorffii HOM05D006021 ORTHO05D007747 5.2e-06 54.7 63 44.4


User provided reference genes

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