Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07899 Sequoiadendron giganteum HOM05D000921 ORTHO05D015533 1.9e-156 555.8 286 100.0
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 1.1e-42 177.9 190 53.7
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 2.4e-42 176.8 182 54.4
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 3.1e-42 176.4 178 53.9
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 6.9e-42 175.3 178 54.5
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 1.2e-41 174.5 167 55.7
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 1.5e-41 174.1 156 59.6
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 1.5e-41 174.1 205 48.8
HPP92_021305 Vanilla planifolia HOM05D000921 ORTHO05D004153 1.5e-41 174.1 145 60.7
Nitab4.5_0000459g0090 Nicotiana tabacum HOM05D000921 ORTHO05D004153 2.0e-41 173.7 184 51.6
PGR044G0864 Punica granatum HOM05D000921 ORTHO05D004153 3.4e-41 172.9 156 58.3
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 4.5e-41 172.6 178 52.8
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 7.7e-41 171.8 170 55.3
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 7.7e-41 171.8 170 55.3
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 7.7e-41 171.8 180 51.7
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 1.0e-40 171.4 178 52.8
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.0e-40 171.4 178 52.8
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 1.3e-40 171.0 169 54.4
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 1.3e-40 171.0 157 57.3
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 1.7e-40 170.6 178 53.4
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 2.2e-40 170.2 156 57.1
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 2.2e-40 170.2 178 51.7
FAN27G1722 Fragaria x ananassa HOM05D000921 ORTHO05D004153 2.2e-40 170.2 178 51.7
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 2.2e-40 170.2 166 52.4
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 3.8e-40 169.5 170 53.5
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 5.0e-40 169.1 170 54.7
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 5.0e-40 169.1 145 60.0
VMungo0720G2500 Vigna mungo HOM05D000921 ORTHO05D015533 5.0e-40 169.1 143 60.8
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 6.5e-40 168.7 154 55.8
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 6.5e-40 168.7 143 60.1
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 8.5e-40 168.3 145 59.3
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 8.5e-40 168.3 160 56.2
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 8.5e-40 168.3 160 56.2
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 1.1e-39 167.9 155 56.1
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 1.1e-39 167.9 165 52.1
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 1.4e-39 167.5 155 56.1
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 2.5e-39 166.8 182 52.2
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 2.5e-39 166.8 184 50.5
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 2.5e-39 166.8 154 57.1
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 2.5e-39 166.8 178 51.1
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 2.5e-39 166.8 145 59.3
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 3.2e-39 166.4 171 53.8
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 4.2e-39 166.0 143 59.4
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 5.5e-39 165.6 168 52.4
Sc17g0001160 Simmondsia chinensis HOM05D000921 ORTHO05D004153 5.5e-39 165.6 141 59.6
MELO3C015783.2 Cucumis melo HOM05D000921 ORTHO05D004153 7.2e-39 165.2 155 55.5
Sp1g02060 Schrenkiella parvula HOM05D000921 ORTHO05D004153 7.2e-39 165.2 180 51.1
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 7.2e-39 165.2 145 57.9
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 9.4e-39 164.9 172 52.9
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 9.4e-39 164.9 156 55.1
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 9.4e-39 164.9 166 54.8
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 1.2e-38 164.5 159 54.1
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 1.2e-38 164.5 163 54.0
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 1.6e-38 164.1 202 49.5
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 2.1e-38 163.7 159 56.0
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 2.1e-38 163.7 171 51.5
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 2.1e-38 163.7 164 51.2
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 2.7e-38 163.3 154 55.8
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 2.7e-38 163.3 143 58.7
Thhalv10006519m.g Eutrema salsugineum HOM05D000921 ORTHO05D004153 2.7e-38 163.3 181 51.9
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 2.7e-38 163.3 185 49.2
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 4.7e-38 162.5 143 58.7
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 4.7e-38 162.5 166 53.0
AL1G12520 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 7.9e-38 161.8 181 50.8
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 7.9e-38 161.8 154 56.5
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 7.9e-38 161.8 194 49.5
HanXRQChr01g0005671 Helianthus annuus HOM05D000921 ORTHO05D004153 1.0e-37 161.4 186 48.9
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 1.0e-37 161.4 154 55.8
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 1.4e-37 161.0 149 59.1
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 1.4e-37 161.0 142 59.2
Os03g0744675 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004153 1.8e-37 160.6 167 52.1
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 2.3e-37 160.2 154 53.2
EL10Ac5g10491 Beta vulgaris HOM05D000921 ORTHO05D004153 3.0e-37 159.8 168 53.0
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 3.0e-37 159.8 154 53.9
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 3.9e-37 159.5 170 49.4
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 3.9e-37 159.5 145 55.9
Oeu002265.1 Olea europaea HOM05D000921 ORTHO05D004153 3.9e-37 159.5 143 55.2
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 3.9e-37 159.5 141 58.9
arahy.Tifrunner.gnm1.ann1.0T0464 Arachis hypogaea HOM05D000921 ORTHO05D004153 5.2e-37 159.1 156 54.5
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 5.2e-37 159.1 171 49.7
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 5.2e-37 159.1 186 48.9
Sc05g0001320 Simmondsia chinensis HOM05D000921 ORTHO05D004153 6.7e-37 158.7 141 57.4
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 1.5e-36 157.5 142 57.0
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 1.5e-36 157.5 172 51.2
ECA248G3113 Erigeron canadensis HOM05D000921 ORTHO05D004153 2.0e-36 157.1 186 47.8
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 2.6e-36 156.8 164 51.8
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 4.4e-36 156.0 171 52.0
AT4G02660 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 5.7e-36 155.6 154 52.6
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 9.7e-36 154.8 172 50.6
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 2.8e-35 153.3 175 50.3
AT1G03060 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 3.7e-35 152.9 174 50.6
BcaB03g15744 Brassica carinata HOM05D000921 ORTHO05D004153 3.7e-35 152.9 157 53.5
Carub.0001s0220 Capsella rubella HOM05D000921 ORTHO05D004153 3.7e-35 152.9 163 51.5
BcaC07g42269 Brassica carinata HOM05D000921 ORTHO05D004153 6.3e-35 152.1 189 46.6
A10p01690 Brassica napus HOM05D000921 ORTHO05D004153 8.2e-35 151.8 191 46.6
BraA10t42445Z Brassica rapa HOM05D000921 ORTHO05D004153 8.2e-35 151.8 191 46.6
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 8.2e-35 151.8 180 46.7
C05p01680 Brassica napus HOM05D000921 ORTHO05D004153 2.4e-34 150.2 189 47.6
BolC5t28947H Brassica oleracea HOM05D000921 ORTHO05D004153 2.4e-34 150.2 189 47.6
Lsat_1_v5_gn_8_93941 Lactuca sativa HOM05D000921 ORTHO05D004153 3.1e-34 149.8 188 46.3
A09p68370 Brassica napus HOM05D000921 ORTHO05D004153 5.3e-34 149.1 167 48.5
BraA09t42173Z Brassica rapa HOM05D000921 ORTHO05D004153 5.3e-34 149.1 167 48.5
AUR62032282 Chenopodium quinoa HOM05D000921 ORTHO05D004153 7.0e-34 148.7 166 51.2
arahy.Tifrunner.gnm1.ann1.EGZY1N Arachis hypogaea HOM05D000921 ORTHO05D004153 1.6e-33 147.5 135 56.3
arahy.Tifrunner.gnm1.ann1.IAH9UB Arachis hypogaea HOM05D000921 ORTHO05D004153 1.6e-33 147.5 135 56.3
AL6G50380 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 2.6e-33 146.7 169 48.5
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 4.5e-33 146.0 150 50.0
C08p52940 Brassica napus HOM05D000921 ORTHO05D004153 5.9e-33 145.6 167 47.9
BolC8t52810H Brassica oleracea HOM05D000921 ORTHO05D004153 5.9e-33 145.6 167 47.9
BcaB01g02482 Brassica carinata HOM05D000921 ORTHO05D004153 7.7e-33 145.2 157 51.0
Zm00001eb056940 Zea mays HOM05D000921 ORTHO05D004153 7.7e-33 145.2 146 52.1
Mapoly0082s0083 Marchantia polymorpha HOM05D000921 ORTHO05D004153 1.7e-32 144.1 225 43.1
BcaC01g06740 Brassica carinata HOM05D000921 ORTHO05D004153 2.9e-32 143.3 157 50.3
Nitab4.5_0003424g0020 Nicotiana tabacum HOM05D000921 ORTHO05D004153 2.9e-32 143.3 184 46.2
Carub.0006s3446 Capsella rubella HOM05D000921 ORTHO05D004153 8.5e-32 141.7 165 47.3
Lalb_Chr01g0019981 Lupinus albus HOM05D000921 ORTHO05D004153 1.6e-30 137.5 161 46.6
PSO461G0055 Papaver somniferum HOM05D000921 ORTHO05D004153 2.7e-30 136.7 155 50.3
CARHR250960 Cardamine hirsuta HOM05D000921 ORTHO05D004153 4.7e-30 136.0 216 41.7
Sp6g02580 Schrenkiella parvula HOM05D000921 ORTHO05D004153 4.7e-30 136.0 142 50.7
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 3.0e-29 133.3 143 49.7
Pp3c16_11700 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.6e-28 130.2 156 44.9
Pp3c16_11705 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.6e-28 130.2 156 44.9
Pp3c6_26100 Physcomitrium patens HOM05D000921 ORTHO05D004153 4.4e-28 129.4 217 39.6
Cpa.g.sc52.120 Carica papaya HOM05D000921 ORTHO05D004153 1.7e-27 127.5 137 50.4
Pp3c6_5700 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.2e-27 127.1 220 40.0
Pp3c6_5706 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.2e-27 127.1 220 40.0
unitig_61.g26265 Utricularia gibba HOM05D000921 ORTHO05D004153 4.8e-27 125.9 169 41.4
SHI10018 Sapria himalayana HOM05D000921 ORTHO05D004153 2.4e-26 123.6 155 47.1
SMO236G0048 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 2.4e-26 123.6 141 46.8
C03p37690 Brassica napus HOM05D000921 ORTHO05D015533 9.1e-26 121.7 116 53.4
BolC3t16058H Brassica oleracea HOM05D000921 ORTHO05D015533 9.1e-26 121.7 116 53.4
BraA03t12270Z Brassica rapa HOM05D000921 ORTHO05D015533 4.5e-25 119.4 116 51.7
Ah.11g050210 Amaranthus hybridus HOM05D000921 ORTHO05D004153 1.3e-24 117.9 121 52.9
A03p30910 Brassica napus HOM05D000921 ORTHO05D015533 1.7e-24 117.5 116 50.9
Pp3c5_2890 Physcomitrium patens HOM05D000921 ORTHO05D004153 8.5e-24 115.2 151 42.4
Pp3c5_2897 Physcomitrium patens HOM05D000921 ORTHO05D004153 8.5e-24 115.2 151 42.4
HanXRQChr04g0113931 Helianthus annuus HOM05D000921 ORTHO05D004153 1.1e-23 114.8 137 44.5
Lj1C56G7 Lonicera japonica HOM05D000921 ORTHO05D004153 1.5e-23 114.4 174 42.5
AUR62011970 Chenopodium quinoa HOM05D000921 ORTHO05D004153 1.2e-22 111.3 118 52.5
ECA236G3737 Erigeron canadensis HOM05D000921 ORTHO05D004153 2.3e-21 107.1 186 38.2
CDE10G0697 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 2.8e-19 100.1 148 41.2
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 3.1e-18 96.7 89 56.2
DCAR_002700 Daucus carota HOM05D000921 ORTHO05D004153 4.1e-18 96.3 109 47.7
CDE04G0357 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 1.7e-16 90.9 92 50.0
Gohir.A08G045250 Gossypium hirsutum HOM05D000921 ORTHO05D015533 2.0e-12 77.4 53 69.8
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 3.4e-12 76.6 115 38.3
Gohir.D08G055560 Gossypium hirsutum HOM05D000921 ORTHO05D015533 3.4e-12 76.6 66 57.6
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 4.9e-11 72.8 222 28.4
Gorai.012G075400 Gossypium raimondii HOM05D000921 ORTHO05D015533 9.2e-10 68.6 42 78.6
Lsat_1_v5_gn_1_73041 Lactuca sativa HOM05D002056 ORTHO05D036458 9.2e-10 68.6 91 44.0
Hund09551 Selenicereus undatus HOM05D000921 ORTHO05D004153 1.6e-09 67.8 73 52.1
Lsat_1_v5_gn_1_120240 Lactuca sativa HOM05D000921 ORTHO05D036458 4.5e-09 66.2 91 42.9


User provided reference genes

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