Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07706 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 4.4e-62 241.1 122 100.0
SEGI_00993 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 3.2e-52 208.4 105 99.0
SEGI_26497 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 4.6e-51 204.5 105 98.1
SEGI_27379 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 3.9e-50 201.4 105 97.1
SEGI_18983 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 5.0e-50 201.1 103 98.1
SEGI_34575 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 1.9e-49 199.1 103 98.1
SEGI_07498 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 4.1e-36 154.8 115 72.2
SEGI_33752 Sequoiadendron giganteum HOM05D004161 ORTHO05D383978 8.4e-29 130.6 102 70.6
SEGI_07197 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 7.1e-28 127.5 110 65.5
Pp3c21_1460 Physcomitrium patens HOM05D004161 ORTHO05D005770 1.8e-23 112.8 61 91.8
SalBow8G4837 Salvia bowleyana HOM05D004161 ORTHO05D005770 1.8e-23 112.8 59 96.6
BcaB03g14179 Brassica carinata HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
BcaB07g32287 Brassica carinata HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
A07p14130 Brassica napus HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
BraA07t29171Z Brassica rapa HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
Carub.0001s2242 Capsella rubella HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
Thhalv10008042m.g Eutrema salsugineum HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
Sp1g20380 Schrenkiella parvula HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
SEGI_19243 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 2.4e-23 112.5 59 94.9
vmacro01979 Vaccinium macrocarpon HOM05D004161 ORTHO05D005770 2.4e-23 112.5 61 93.4
MBI16_g31792_MAGBIO Magnolia biondii HOM05D004161 ORTHO05D005770 3.1e-23 112.1 70 81.4
Duzib187G0390 Durio zibethinus HOM05D004161 ORTHO05D005770 4.0e-23 111.7 59 94.9
Mapoly0006s0112 Marchantia polymorpha HOM05D004161 ORTHO05D005770 4.0e-23 111.7 61 90.2
Pp3c18_17430 Physcomitrium patens HOM05D004161 ORTHO05D005770 4.0e-23 111.7 61 90.2
Sabra18G0014200 Salix brachista HOM05D004161 ORTHO05D005770 4.0e-23 111.7 59 94.9
Actinidia00392 Actinidia chinensis HOM05D004161 ORTHO05D015225 5.3e-23 111.3 79 73.4
ClCG08G012710 Citrullus lanatus HOM05D004161 ORTHO05D005770 5.3e-23 111.3 61 91.8
Sed0017284 Sechium edule HOM05D004161 ORTHO05D005770 5.3e-23 111.3 61 91.8
THA.LOC104821862 Tarenaya hassleriana HOM05D004161 ORTHO05D005770 5.3e-23 111.3 59 94.9
AL1G36480 Arabidopsis lyrata HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
BcaC05g26198 Brassica carinata HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
A09p41820 Brassica napus HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
C05p22060 Brassica napus HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
BolC5t30902H Brassica oleracea HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
BraA09t39671Z Brassica rapa HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
CAN.G65.161 Capsicum annuum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
CARHR023300 Cardamine hirsuta HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 93.2
Cpa.g.sc23.7 Carica papaya HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
HanXRQChr17g0533271 Helianthus annuus HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Nitab4.5_0001586g0240 Nicotiana tabacum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Nitab4.5_0002553g0070 Nicotiana tabacum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Peaxi162Scf00180g00518 Petunia axillaris HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
RcHm_v2.0_Chr6g0304891 Rosa chinensis HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Solyc06g073150.3 Solanum lycopersicum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Solyc11g017300.2 Solanum lycopersicum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Sopen06g029500 Solanum pennellii HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Sopen11g009190 Solanum pennellii HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
PGSC0003DMG400009240 Solanum tuberosum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
PGSC0003DMG400026918 Solanum tuberosum HOM05D004161 ORTHO05D005770 6.9e-23 110.9 59 94.9
Aa31LG4G9280 Aethionema arabicum HOM05D004161 ORTHO05D005770 9.0e-23 110.5 59 93.2
AL2G30840 Arabidopsis lyrata HOM05D004161 ORTHO05D005770 9.0e-23 110.5 59 93.2
Thhalv10018788m.g Eutrema salsugineum HOM05D004161 ORTHO05D005770 9.0e-23 110.5 59 93.2
AagrBONN_evm.TU.Sc2ySwM_117.740 Anthoceros agrestis HOM05D004161 ORTHO05D005770 1.2e-22 110.2 61 91.8
AT1G22920 Arabidopsis thaliana HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 91.5
AT1G71230 Arabidopsis thaliana HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 93.2
CDE03G0096 Ceratophyllum demersum HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 93.2
CDE04G3237 Ceratophyllum demersum HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 93.2
Potri.006G275100 Populus trichocarpa HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 93.2
Potri.018G006100 Populus trichocarpa HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 93.2
Sabra06G0212900 Salix brachista HOM05D004161 ORTHO05D005770 1.2e-22 110.2 59 93.2
Atru.chr7.2634 Acer truncatum HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Ah.11g043770 Amaranthus hybridus HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
EL10Ac2g03746 Beta vulgaris HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
CANSAT25G1154 Cannabis sativa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Cfa013264 Carpinus fangiana HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
CiPaw.07G213300 Carya illinoinensis HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
CiPaw.08G019300 Carya illinoinensis HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
AUR62009062 Chenopodium quinoa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
AUR62020608 Chenopodium quinoa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Ciclev10008736m.g Citrus clementina HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
COL.COLO4_19041 Corchorus olitorius HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Haze_21728 Corylus avellana HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
MELO3C011193.2 Cucumis melo HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
CsaV3_2G031440 Cucumis sativus L. HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
DCAR_027524 Daucus carota HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Dinv10170 Davidia involucrata HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Duzib168G1137 Durio zibethinus HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Migut.E01406 Erythranthe guttata HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Eucgr.C02093 Eucalyptus grandis HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
FvH4_2g36890 Fragaria vesca HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
FAN15G1150 Fragaria x ananassa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
FAN20G0045 Fragaria x ananassa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
FAN27G0727 Fragaria x ananassa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Gohir.A05G064800 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Gohir.D05G067400 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Gorai.009G068200 Gossypium raimondii HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Lsat_1_v5_gn_3_9100 Lactuca sativa HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Lj7C749T8 Lonicera japonica HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
MD08G1130400 Malus domestica HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Manes.03G003400 Manihot esculenta HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Nn2g12726 Nelumbo nucifera HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Prupe.1G460800 Prunus persica HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
QL12p025061 Quercus lobata HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
SalBow4G1531 Salvia bowleyana HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 91.5
Sed0011095 Sechium edule HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Hund03286 Selenicereus undatus HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
SGA_v2.0_scaffold121G33036 Striga asiatica HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
SGA_v2.0_scaffold169G38590 Striga asiatica HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
Thecc.09G006500 Theobroma cacao HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
TWI32G1088 Tripterygium wilfordii HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
TWI34G1526 Tripterygium wilfordii HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
TAR626G0400 Trochodendron aralioides HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
unitig_0.g2820 Utricularia gibba HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
unitig_747.g21902 Utricularia gibba HOM05D004161 ORTHO05D005770 1.5e-22 109.8 59 93.2
MD15G1108500 Malus domestica HOM05D004161 ORTHO05D005770 2.0e-22 109.4 59 93.2
Rhsim11G0155000 Rhododendron simsii HOM05D004161 ORTHO05D005770 2.0e-22 109.4 72 79.2
ATR0580G326 Amborella trichopoda HOM05D004161 ORTHO05D005770 2.6e-22 109.0 59 93.2
CSS0014609 Camellia sinensis var. sinensis HOM05D004161 ORTHO05D005770 2.6e-22 109.0 61 90.2
CARHR064530 Cardamine hirsuta HOM05D004161 ORTHO05D005770 2.6e-22 109.0 59 91.5
Hma1.2p1_0432F.1_g151800 Hydrangea macrophylla HOM05D004161 ORTHO05D005770 2.6e-22 109.0 59 91.5
SEGI_38075 Sequoiadendron giganteum HOM05D000047 ORTHO05D015225 2.6e-22 109.0 115 60.0
Oeu019278.1 Olea europaea HOM05D004161 ORTHO05D005770 3.4e-22 108.6 59 91.5
RhsimUnG0126200 Rhododendron simsii HOM05D004161 ORTHO05D005770 3.4e-22 108.6 66 84.8
Carub.0002s1811 Capsella rubella HOM05D004161 ORTHO05D005770 4.4e-22 108.2 59 91.5
Ca_15670_v3 Cicer arietinum L. HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
Lj1g0012076 Lotus japonicus HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
Manes.16G136100 Manihot esculenta HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
Medtr3g108790 Medicago truncatula HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
Psat5g024160 Pisum sativum HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
Sc09g0010220 Simmondsia chinensis HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
TPR.G12320 Trifolium pratense HOM05D004161 ORTHO05D005770 5.8e-22 107.8 59 91.5
Actinidia34376 Actinidia chinensis HOM05D004161 ORTHO05D005770 7.6e-22 107.5 109 56.0
Aqoxy7G02966 Aquilegia oxysepala HOM05D004161 ORTHO05D005770 7.6e-22 107.5 59 89.8
MSTRG.13941 Avicennia marina HOM05D004161 ORTHO05D005770 7.6e-22 107.5 59 91.5
Glyma.04G075000 Glycine max HOM05D004161 ORTHO05D005770 7.6e-22 107.5 59 91.5
Glyma.06G076000 Glycine max HOM05D004161 ORTHO05D005770 7.6e-22 107.5 59 91.5
Phvul.009G100700 Phaseolus vulgaris HOM05D004161 ORTHO05D005770 7.6e-22 107.5 59 91.5
VMungo1309G2307 Vigna mungo HOM05D004161 ORTHO05D005770 7.6e-22 107.5 59 91.5
Lalb_Chr23g0269071 Lupinus albus HOM05D004161 ORTHO05D005770 9.9e-22 107.1 59 91.5
PSO063G1389 Papaver somniferum HOM05D004161 ORTHO05D005770 9.9e-22 107.1 59 88.1
PSO170G5806 Papaver somniferum HOM05D004161 ORTHO05D005770 9.9e-22 107.1 59 88.1
Gohir.D06G108400 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.3e-21 106.7 57 93.0
Lalb_Chr08g0243601 Lupinus albus HOM05D004161 ORTHO05D005770 1.3e-21 106.7 59 91.5
Sp5g26420 Schrenkiella parvula HOM05D004161 ORTHO05D005770 1.3e-21 106.7 59 89.8
Gohir.A06G106200 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.7e-21 106.3 57 93.0
PGR142G1061 Punica granatum HOM05D004161 ORTHO05D005770 2.9e-21 105.5 59 89.8
HPP92_017054 Vanilla planifolia HOM05D004161 ORTHO05D005770 2.9e-21 105.5 61 86.9
arahy.Tifrunner.gnm1.ann1.T9YY8P Arachis hypogaea HOM05D004161 ORTHO05D005770 3.8e-21 105.1 59 89.8
ECA246G1306 Erigeron canadensis HOM05D004161 ORTHO05D005770 3.8e-21 105.1 59 89.8
SMO367G0024 Selaginella moellendorffii HOM05D004161 ORTHO05D005770 1.1e-20 103.6 61 82.0
Gorai.010G123100 Gossypium raimondii HOM05D004161 ORTHO05D005770 1.4e-20 103.2 57 89.5
Os04g0654700 Oryza sativa ssp. japonica HOM05D004161 ORTHO05D005770 1.9e-20 102.8 75 72.0
arahy.Tifrunner.gnm1.ann1.DD3LGG Arachis hypogaea HOM05D004161 ORTHO05D005770 2.4e-20 102.4 59 88.1
Zm00001eb068020 Zea mays HOM05D004161 ORTHO05D005770 1.2e-19 100.1 59 84.7
Oeu018399.2 Olea europaea HOM05D004161 ORTHO05D005770 1.6e-19 99.8 59 83.1
Cre09.g399178 Chlamydomonas reinhardtii HOM05D004161 ORTHO05D005770 1.3e-16 90.1 59 72.9
MCO01G347 Micromonas commoda HOM05D004161 ORTHO05D005770 1.4e-15 86.7 56 71.4
SEGI_36627 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 1.4e-15 86.7 55 81.8
SEGI_34415 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 9.0e-15 84.0 51 78.4
HPP92_010234 Vanilla planifolia HOM05D004161 ORTHO05D015225 2.6e-14 82.4 50 78.0
Haze_26449 Corylus avellana HOM05D004161 ORTHO05D005770 3.4e-14 82.0 69 59.4
Gorai.001G001700 Gossypium raimondii HOM05D004161 ORTHO05D005770 9.9e-14 80.5 51 80.4
PRCOL_00006125 Prasinoderma coloniale HOM05D004161 ORTHO05D005770 2.9e-13 79.0 58 63.8
CSS0034864 Camellia sinensis var. sinensis HOM05D004161 ORTHO05D005770 7.1e-12 74.3 40 90.0
Cfa022118 Carpinus fangiana HOM05D004161 ORTHO05D005770 1.6e-11 73.2 57 61.4
HPP92_010171 Vanilla planifolia HOM05D004161 ORTHO05D015225 2.7e-11 72.4 50 70.0
SEGI_09141 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 7.9e-11 70.9 57 68.4
SEGI_38896 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 1.5e-09 66.6 36 91.7
Cc08_g06790 Coffea canephora HOM05D004161 ORTHO05D005770 2.5e-09 65.9 33 93.9
GSVIVG01023827001 Vitis vinifera HOM05D004161 ORTHO05D005770 2.5e-09 65.9 33 93.9
BcaC06g35004 Brassica carinata HOM05D004161 ORTHO05D005770 7.4e-09 64.3 36 83.3
HPP92_010239 Vanilla planifolia HOM05D000626 ORTHO05D003868 2.8e-08 62.4 37 81.1
SEGI_09428 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 3.7e-08 62.0 51 62.7
SEGI_11877 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 3.1e-07 58.9 51 60.8
SEGI_00321 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 1.2e-06 57.0 51 56.9
SEGI_12204 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 2.0e-06 56.2 51 58.8
SEGI_07811 Sequoiadendron giganteum HOM05D000287 ORTHO05D037580 2.6e-06 55.8 38 71.1


User provided reference genes

Program Settings