Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.8e-87 323.6 159 100.0
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.0e-47 193.7 120 74.2
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 3.7e-45 185.3 120 70.0
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 2.4e-44 182.6 119 71.4
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 3.9e-42 175.3 126 65.1
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 6.6e-42 174.5 120 70.8
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 8.6e-42 174.1 120 66.7
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 8.6e-42 174.1 120 65.0
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.9e-41 172.9 120 64.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 7.3e-41 171.0 126 63.5
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.6e-40 169.9 126 65.1
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 3.6e-40 168.7 126 63.5
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 4.7e-40 168.3 120 63.3
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.8e-39 166.4 120 64.2
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 5.2e-39 164.9 118 66.9
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 5.2e-39 164.9 125 61.6
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 2.6e-38 162.5 120 62.5
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 4.4e-38 161.8 120 61.7
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 4.4e-38 161.8 167 53.3
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 4.4e-38 161.8 167 53.3
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 5.8e-38 161.4 120 61.7
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 7.5e-38 161.0 124 59.7
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 7.5e-38 161.0 124 59.7
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 7.5e-38 161.0 120 62.5
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 7.5e-38 161.0 145 57.2
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 9.8e-38 160.6 167 52.7
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.3e-37 160.2 122 62.3
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 1.3e-37 160.2 120 59.2
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 3.7e-37 158.7 120 60.8
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 6.4e-37 157.9 125 59.2
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 6.4e-37 157.9 124 58.1
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 1.1e-36 157.1 124 61.3
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.1e-36 157.1 120 60.0
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 1.4e-36 156.8 122 59.8
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 4.1e-36 155.2 120 59.2
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 4.1e-36 155.2 120 57.5
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 5.4e-36 154.8 120 59.2
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 7.1e-36 154.5 125 57.6
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 7.1e-36 154.5 125 57.6
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 9.2e-36 154.1 125 56.0
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 9.2e-36 154.1 120 58.3
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.2e-35 153.7 120 57.5
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.2e-35 153.7 125 56.0
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.6e-35 153.3 125 56.8
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 2.1e-35 152.9 124 57.3
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 2.7e-35 152.5 125 55.2
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 2.7e-35 152.5 125 56.0
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 3.5e-35 152.1 120 58.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 3.5e-35 152.1 120 57.5
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 4.6e-35 151.8 125 55.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.6e-35 151.8 128 53.9
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 6.0e-35 151.4 130 56.9
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 7.8e-35 151.0 125 55.2
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 7.8e-35 151.0 125 55.2
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 7.8e-35 151.0 120 57.5
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.0e-34 150.6 120 56.7
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.0e-34 150.6 125 54.4
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.0e-34 150.6 125 54.4
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.0e-34 150.6 120 57.5
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.0e-34 150.6 124 57.3
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 1.0e-34 150.6 124 57.3
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.3e-34 150.2 120 59.2
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.3e-34 150.2 120 58.3
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 1.3e-34 150.2 120 59.2
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.3e-34 150.2 120 59.2
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 1.7e-34 149.8 118 59.3
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.7e-34 149.8 120 59.2
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.7e-34 149.8 122 54.1
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 2.3e-34 149.4 118 59.3
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 5.1e-34 148.3 120 58.3
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 8.6e-34 147.5 120 56.7
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 1.1e-33 147.1 121 56.2
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 1.5e-33 146.7 120 56.7
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.9e-33 146.4 120 57.5
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.3e-33 145.6 120 56.7
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 7.3e-33 144.4 118 56.8
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 7.3e-33 144.4 118 56.8
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 7.3e-33 144.4 127 58.3
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.5e-33 144.1 117 55.6
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.2e-32 143.7 124 54.8
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.2e-32 143.7 120 55.0
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 1.2e-32 143.7 120 55.8
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.6e-32 143.3 118 56.8
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.6e-32 143.3 120 55.8
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.1e-32 142.9 117 56.4
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.1e-32 142.9 117 56.4
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 2.8e-32 142.5 120 52.5
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 3.6e-32 142.1 125 54.4
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 2.6e-30 136.0 120 55.8
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 2.2e-29 132.9 120 51.7
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.9e-29 132.5 127 57.5
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.9e-28 129.8 118 52.5
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.9e-28 129.8 118 52.5
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 2.4e-28 129.4 120 50.8
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 4.3e-25 118.6 151 40.4
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.3e-25 118.6 127 46.5
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.2e-24 117.1 119 47.9
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-22 110.5 84 63.1
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 2.6e-22 109.4 112 49.1
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.4e-20 103.6 82 56.1
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.9e-20 103.2 86 54.7
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.2e-20 102.4 86 54.7
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 5.4e-20 101.7 82 57.3
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.1e-16 89.7 95 42.1
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 6.2e-16 88.2 126 42.1
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.5e-14 83.6 138 34.1
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.3e-13 80.5 118 38.1
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.7e-13 80.1 105 41.0
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 8.4e-13 77.8 111 39.6
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.9e-12 76.6 86 47.7
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 3.2e-12 75.9 118 39.0
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.1e-12 74.7 86 40.7
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.1e-11 73.2 112 35.7
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.7e-10 70.1 104 37.5
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 2.1e-08 63.2 80 43.8
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 4.8e-08 62.0 43 62.8
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 1.8e-07 60.1 55 43.6


User provided reference genes

Program Settings