Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07215 Sequoiadendron giganteum HOM05D004403 ORTHO05D043538 1.3e-55 219.5 116 100.0
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 8.5e-31 137.1 103 69.9
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 2.5e-30 135.6 94 75.5
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 4.2e-30 134.8 95 71.6
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 1.2e-29 133.3 99 69.7
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 1.2e-29 133.3 101 67.3
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 2.1e-29 132.5 104 68.3
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 2.1e-29 132.5 104 68.3
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 3.6e-29 131.7 99 68.7
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 3.6e-29 131.7 107 66.4
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 4.7e-29 131.3 101 66.3
ClCG09G013380 Citrullus lanatus HOM05D004403 ORTHO05D006164 4.7e-29 131.3 99 68.7
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 4.7e-29 131.3 97 70.1
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 8.0e-29 130.6 101 68.3
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.0e-28 130.2 88 76.1
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 1.0e-28 130.2 94 68.1
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 1.4e-28 129.8 101 67.3
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 1.4e-28 129.8 101 70.3
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 1.8e-28 129.4 101 67.3
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 1.8e-28 129.4 103 67.0
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 1.8e-28 129.4 94 69.1
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 2.3e-28 129.0 88 75.0
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 2.3e-28 129.0 88 75.0
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 2.3e-28 129.0 101 67.3
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 2.3e-28 129.0 107 64.5
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 2.3e-28 129.0 101 66.3
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 2.3e-28 129.0 88 75.0
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 3.0e-28 128.6 101 65.3
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 3.9e-28 128.3 99 69.7
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 3.9e-28 128.3 90 72.2
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 5.2e-28 127.9 95 67.4
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 5.2e-28 127.9 88 73.9
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 5.2e-28 127.9 93 72.0
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 5.2e-28 127.9 99 69.7
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 5.2e-28 127.9 97 70.1
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 6.7e-28 127.5 103 63.1
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 6.7e-28 127.5 101 65.3
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 8.8e-28 127.1 93 72.0
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 1.1e-27 126.7 88 73.9
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 1.5e-27 126.3 93 68.8
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 1.5e-27 126.3 101 65.3
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 1.5e-27 126.3 101 67.3
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 1.5e-27 126.3 99 66.7
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 2.0e-27 125.9 101 64.4
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 2.6e-27 125.6 97 66.0
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 2.6e-27 125.6 101 66.3
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 2.6e-27 125.6 94 67.0
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 3.3e-27 125.2 97 67.0
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 3.3e-27 125.2 101 67.3
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 5.7e-27 124.4 96 66.7
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 5.7e-27 124.4 88 70.5
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 5.7e-27 124.4 99 67.7
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 5.7e-27 124.4 101 64.4
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 7.4e-27 124.0 90 68.9
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 7.4e-27 124.0 104 65.4
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 9.7e-27 123.6 101 63.4
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 9.7e-27 123.6 101 64.4
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 9.7e-27 123.6 101 65.3
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 9.7e-27 123.6 94 67.0
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 1.3e-26 123.2 90 70.0
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 1.3e-26 123.2 91 69.2
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 1.7e-26 122.9 99 66.7
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.7e-26 122.9 99 66.7
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.7e-26 122.9 99 66.7
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.7e-26 122.9 99 66.7
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.7e-26 122.9 99 66.7
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 1.7e-26 122.9 101 64.4
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 2.2e-26 122.5 104 62.5
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 2.2e-26 122.5 104 62.5
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 2.2e-26 122.5 99 65.7
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 2.2e-26 122.5 101 64.4
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 2.8e-26 122.1 101 61.4
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 2.8e-26 122.1 94 67.0
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 2.8e-26 122.1 94 67.0
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 2.8e-26 122.1 90 68.9
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 3.7e-26 121.7 101 64.4
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 3.7e-26 121.7 101 64.4
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 4.8e-26 121.3 101 61.4
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 4.8e-26 121.3 101 61.4
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 6.3e-26 120.9 93 66.7
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 8.2e-26 120.6 94 64.9
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 8.2e-26 120.6 94 66.0
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 1.1e-25 120.2 101 65.3
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 4.1e-25 118.2 102 64.7
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 4.1e-25 118.2 102 64.7
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 1.6e-24 116.3 92 63.0
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 2.2e-23 112.5 119 53.8
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 2.2e-23 112.5 93 60.2
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 6.1e-21 104.4 86 65.1
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 3.4e-19 98.6 73 68.5
Sopen12g017630 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-17 93.2 65 70.8
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 7.0e-17 90.9 69 71.0
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 1.6e-13 79.7 62 66.1
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 2.6e-11 72.4 62 61.3
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 1.3e-10 70.1 52 67.3
Cpa.g.sc3.265 Carica papaya HOM05D004403 ORTHO05D043538 2.8e-10 68.9 71 52.1
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 1.4e-09 66.6 45 71.1
Cpa.g.sc3.267 Carica papaya HOM05D004403 ORTHO05D006164 2.4e-09 65.9 55 60.0
MCO07G456 Micromonas commoda HOM05D004403 ORTHO05D006164 1.0e-07 60.5 80 45.0
MD07G1258300 Malus domestica HOM05D004403 ORTHO05D006164 1.3e-07 60.1 44 68.2
PRCOL_00006166 Prasinoderma coloniale HOM05D004403 ORTHO05D006164 1.5e-06 56.6 83 39.8


User provided reference genes

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