Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 6.1e-118 427.6 223 100.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.3e-29 132.1 136 46.3
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 6.9e-29 131.7 135 48.9
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 9.0e-29 131.3 164 44.5
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 9.0e-29 131.3 135 47.4
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.5e-28 130.6 135 49.6
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.6e-28 129.8 135 45.2
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.7e-27 127.1 135 45.2
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.7e-27 127.1 152 44.7
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.7e-27 127.1 135 43.7
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 2.2e-27 126.7 135 43.7
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.1e-26 124.4 135 43.7
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.4e-26 124.0 135 47.4
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.2e-26 122.5 116 47.4
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.4e-26 122.1 130 44.6
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.4e-26 122.1 130 44.6
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 5.4e-26 122.1 134 44.8
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 7.1e-26 121.7 158 44.3
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 9.3e-26 121.3 139 47.5
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 2.7e-25 119.8 130 46.2
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 2.7e-25 119.8 159 41.5
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 3.5e-25 119.4 136 44.1
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 7.9e-25 118.2 135 44.4
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.0e-24 117.9 134 46.3
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.8e-24 117.1 143 44.1
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.0e-24 116.3 136 45.6
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.5e-23 114.0 135 41.5
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.9e-23 113.6 135 40.0
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 1.9e-23 113.6 136 43.4
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 3.3e-23 112.8 135 44.4
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 5.6e-23 112.1 135 44.4
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 5.6e-23 112.1 137 44.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 7.4e-23 111.7 138 43.5
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.6e-22 110.5 135 43.0
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.6e-22 110.5 137 40.9
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.6e-22 110.5 194 36.1
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 2.1e-22 110.2 135 40.0
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 2.1e-22 110.2 137 43.1
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 2.1e-22 110.2 138 42.0
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 2.8e-22 109.8 138 37.7
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 2.8e-22 109.8 168 41.1
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 3.6e-22 109.4 164 40.9
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 3.6e-22 109.4 133 42.9
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 4.8e-22 109.0 134 44.0
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 4.8e-22 109.0 135 40.0
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 4.8e-22 109.0 138 42.8
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 6.2e-22 108.6 134 41.0
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.1e-22 108.2 137 39.4
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 8.1e-22 108.2 135 41.5
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 1.1e-21 107.8 136 39.7
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.8e-21 107.1 135 38.5
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-21 107.1 137 39.4
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.4e-21 106.7 135 39.3
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 3.1e-21 106.3 135 40.7
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 3.1e-21 106.3 135 42.2
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 3.1e-21 106.3 135 39.3
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 3.1e-21 106.3 135 41.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 4.0e-21 105.9 138 41.3
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 5.3e-21 105.5 135 37.0
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 5.3e-21 105.5 135 40.7
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 5.3e-21 105.5 137 43.8
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 9.0e-21 104.8 170 35.9
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.2e-20 104.4 135 40.0
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.2e-20 104.4 139 42.4
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.5e-20 104.0 135 39.3
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.0e-20 103.6 115 43.5
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 2.0e-20 103.6 135 42.2
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 2.6e-20 103.2 135 40.0
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 3.4e-20 102.8 135 40.0
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 3.4e-20 102.8 133 41.4
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 5.8e-20 102.1 159 37.7
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 9.9e-20 101.3 135 39.3
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 9.9e-20 101.3 135 37.0
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 9.9e-20 101.3 139 39.6
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 1.3e-19 100.9 137 42.3
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 4.9e-19 99.0 77 58.4
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 4.9e-19 99.0 135 39.3
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 4.9e-19 99.0 135 39.3
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 4.9e-19 99.0 135 37.0
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 3.2e-18 96.3 139 38.1
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 4.2e-18 95.9 133 39.8
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.6e-17 94.0 92 47.8
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 3.5e-17 92.8 92 46.7
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 3.5e-17 92.8 157 35.7
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 4.6e-17 92.4 74 54.1
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 7.9e-17 91.7 124 39.5
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 3.9e-16 89.4 106 41.5
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 6.7e-16 88.6 148 34.5
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 4.8e-14 82.4 145 33.8
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.8e-13 80.5 132 40.2
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 1.5e-12 77.4 94 39.4
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-12 77.0 155 33.5
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 1.0e-11 74.7 221 24.9
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 1.0e-11 74.7 221 24.9
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 1.3e-11 74.3 158 30.4
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.2e-10 69.7 53 54.7
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 5.5e-10 68.9 93 39.8
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 7.1e-10 68.6 113 34.5
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 2.7e-09 66.6 82 36.6
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 3.0e-08 63.2 82 40.2
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.0e-08 63.2 85 37.6
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.7e-08 62.0 133 32.3
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.9e-07 60.5 115 35.7
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 9.6e-07 58.2 44 52.3
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 8.2e-06 55.1 124 29.0


User provided reference genes

Program Settings