Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 8.4e-140 500.4 254 100.0
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 2.9e-47 193.0 130 72.3
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 4.1e-46 189.1 130 70.0
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 4.1e-46 189.1 130 70.0
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 4.1e-46 189.1 130 70.0
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 4.1e-46 189.1 130 70.0
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 4.1e-46 189.1 130 70.0
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 4.1e-46 189.1 130 69.2
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 5.4e-46 188.7 130 69.2
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 5.4e-46 188.7 130 67.7
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 5.4e-46 188.7 167 56.9
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 7.0e-46 188.3 130 69.2
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 9.2e-46 188.0 167 58.1
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 9.2e-46 188.0 130 68.5
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.2e-45 187.6 131 67.9
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.2e-45 187.6 130 70.8
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.2e-45 187.6 130 68.5
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.6e-45 187.2 130 68.5
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.6e-45 187.2 146 63.7
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 1.6e-45 187.2 130 68.5
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.0e-45 186.8 130 68.5
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 3.5e-45 186.0 146 63.7
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 4.6e-45 185.7 130 67.7
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 7.8e-45 184.9 130 69.2
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 7.8e-45 184.9 130 66.9
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.0e-44 184.5 130 66.9
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.3e-44 184.1 130 68.5
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.3e-44 184.1 130 66.2
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.7e-44 183.7 130 67.7
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.7e-44 183.7 130 68.5
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 5.0e-44 182.2 130 67.7
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 5.0e-44 182.2 130 66.9
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 5.0e-44 182.2 130 69.2
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 6.6e-44 181.8 130 66.9
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 6.6e-44 181.8 175 55.4
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 8.6e-44 181.4 130 65.4
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 8.6e-44 181.4 130 67.7
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.1e-43 181.0 130 68.5
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.1e-43 181.0 175 55.4
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.1e-43 181.0 175 55.4
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.1e-43 181.0 175 55.4
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.5e-43 180.6 130 68.5
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.9e-43 180.3 130 66.2
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 2.5e-43 179.9 130 65.4
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 3.3e-43 179.5 130 63.8
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 3.3e-43 179.5 148 60.8
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 4.3e-43 179.1 129 65.1
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 5.6e-43 178.7 175 53.7
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 7.3e-43 178.3 130 65.4
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 9.5e-43 177.9 175 52.6
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 9.5e-43 177.9 156 57.1
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 9.5e-43 177.9 175 53.1
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 9.5e-43 177.9 175 53.7
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.1e-42 176.8 139 59.7
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.1e-42 176.8 130 64.6
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 2.1e-42 176.8 175 55.4
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 2.8e-42 176.4 191 49.7
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 2.8e-42 176.4 130 64.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 3.6e-42 176.0 130 63.8
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 8.1e-42 174.9 130 66.2
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 8.1e-42 174.9 129 65.1
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 8.1e-42 174.9 130 64.6
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.1e-41 174.5 175 52.6
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.4e-41 174.1 175 54.3
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.8e-41 173.7 130 63.8
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.8e-41 173.7 156 56.4
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 2.3e-41 173.3 130 63.8
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 3.1e-41 172.9 167 53.9
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 3.1e-41 172.9 135 61.5
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 4.0e-41 172.6 131 65.6
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 4.0e-41 172.6 131 65.6
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 5.2e-41 172.2 130 61.5
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.2e-40 171.0 164 54.3
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 1.2e-40 171.0 130 63.1
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.5e-40 170.6 130 61.5
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.5e-40 170.6 130 63.1
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 2.0e-40 170.2 130 61.5
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 2.0e-40 170.2 130 63.1
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 2.0e-40 170.2 130 60.0
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 3.4e-40 169.5 156 53.8
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 3.4e-40 169.5 175 50.3
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.4e-40 169.1 174 51.7
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 5.8e-40 168.7 130 60.8
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 5.8e-40 168.7 130 60.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.8e-40 167.9 130 60.8
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 1.3e-39 167.5 130 58.5
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.3e-39 167.5 130 58.5
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.7e-39 167.2 175 50.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 1.7e-39 167.2 175 48.6
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.2e-39 166.8 175 52.6
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 2.2e-39 166.8 175 51.4
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.1e-38 164.5 142 54.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.4e-38 164.1 110 70.0
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 7.1e-38 161.8 110 68.2
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 9.2e-38 161.4 130 60.8
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.7e-37 159.8 148 53.4
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.7e-37 159.8 148 53.4
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 3.0e-36 156.4 151 54.3
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.2e-32 144.4 156 51.9
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 4.6e-29 132.5 100 66.0
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.0e-29 132.1 134 50.7
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 5.1e-28 129.0 146 50.0
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.2e-26 124.4 130 52.3
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 8.9e-25 118.2 149 45.0
SEGI_26477 Sequoiadendron giganteum HOM05D001040 ORTHO05D002311 3.4e-24 116.3 141 48.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 7.6e-24 115.2 130 44.6
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 3.5e-21 106.3 129 45.0
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 6.0e-21 105.5 125 46.4
SEGI_35006 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.0e-21 105.5 112 57.1
SEGI_03983 Sequoiadendron giganteum HOM05D001108 ORTHO05D001619 1.9e-19 100.5 118 52.5
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 3.5e-13 79.7 100 43.0
SEGI_20716 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.5e-11 73.6 77 54.5
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.3e-11 72.8 70 47.1
SEGI_14923 Sequoiadendron giganteum HOM05D000310 ORTHO05D000509 1.6e-10 70.9 71 52.1
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.1e-09 68.2 96 38.5
SEGI_01454 Sequoiadendron giganteum HOM05D020921 ORTHO05D000001 1.1e-06 58.2 63 52.4
SEGI_08378 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-06 58.2 45 64.4
SEGI_41176 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.2e-06 56.6 81 44.4
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 4.2e-06 56.2 56 46.4


User provided reference genes

Program Settings