Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06338 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 3.2e-142 508.4 261 100.0
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 1.5e-62 243.8 213 55.4
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 1.8e-60 236.9 207 59.4
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.4e-57 227.3 213 55.4
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 3.1e-57 226.1 213 55.4
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 4.5e-56 222.2 215 56.3
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 5.9e-56 221.9 212 56.1
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 1.3e-55 220.7 212 56.1
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 2.9e-55 219.5 211 56.9
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 4.2e-54 215.7 212 56.1
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 9.4e-54 214.5 212 54.2
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 1.2e-53 214.2 212 54.2
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 3.6e-53 212.6 215 53.5
Manes.07G106500 Manihot esculenta HOM05D005234 ORTHO05D006583 3.6e-53 212.6 211 51.7
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 8.0e-53 211.5 212 53.8
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 1.0e-52 211.1 212 53.3
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 1.4e-52 210.7 212 53.3
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 1.4e-52 210.7 217 52.1
BcaB01g00128 Brassica carinata HOM05D005234 ORTHO05D006583 1.8e-52 210.3 211 50.7
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.8e-52 210.3 214 52.8
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 2.3e-52 209.9 212 51.4
AL5G36200 Arabidopsis lyrata HOM05D005234 ORTHO05D006583 4.0e-52 209.1 211 50.7
AT3G55080 Arabidopsis thaliana HOM05D005234 ORTHO05D006583 4.0e-52 209.1 211 50.7
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 6.8e-52 208.4 211 51.7
CARHR165100 Cardamine hirsuta HOM05D005234 ORTHO05D006583 1.5e-51 207.2 214 50.5
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 1.5e-51 207.2 209 51.2
QL08p057492 Quercus lobata HOM05D005234 ORTHO05D006583 1.5e-51 207.2 212 53.3
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 3.4e-51 206.1 214 52.3
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 3.4e-51 206.1 211 51.2
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 7.5e-51 204.9 211 49.3
Thhalv10010346m.g Eutrema salsugineum HOM05D005234 ORTHO05D006583 1.7e-50 203.8 211 49.3
Ciclev10032643m.g Citrus clementina HOM05D005234 ORTHO05D006583 3.7e-50 202.6 202 53.0
Sp5g07340 Schrenkiella parvula HOM05D005234 ORTHO05D006583 3.7e-50 202.6 211 49.3
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 1.4e-49 200.7 207 53.6
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.4e-49 199.9 215 50.7
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 3.1e-49 199.5 212 49.1
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 4.1e-49 199.1 208 51.0
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 7.0e-49 198.4 219 48.9
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 2.0e-48 196.8 211 49.8
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 2.7e-48 196.4 211 49.8
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 3.5e-48 196.1 211 49.3
PGR044G0090 Punica granatum HOM05D005234 ORTHO05D006583 3.5e-48 196.1 211 51.7
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 5.9e-48 195.3 211 49.3
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 7.7e-48 194.9 208 53.8
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 1.0e-47 194.5 212 50.0
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 1.7e-47 193.7 212 49.1
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 1.7e-47 193.7 211 50.2
Sed0019162 Sechium edule HOM05D005234 ORTHO05D006583 2.2e-47 193.4 212 50.9
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 6.5e-47 191.8 212 49.5
AUR62025541 Chenopodium quinoa HOM05D005234 ORTHO05D006583 8.5e-47 191.4 223 49.3
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 8.5e-47 191.4 211 49.3
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 1.5e-46 190.7 212 48.6
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 1.9e-46 190.3 192 55.2
Migut.A00396 Erythranthe guttata HOM05D005234 ORTHO05D006583 7.2e-46 188.3 212 50.5
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 9.4e-46 188.0 208 47.1
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 9.4e-46 188.0 232 45.7
VMungo0720G1519 Vigna mungo HOM05D005234 ORTHO05D006583 9.4e-46 188.0 214 49.1
Phvul.007G007800 Phaseolus vulgaris HOM05D005234 ORTHO05D006583 2.7e-45 186.4 212 49.1
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 8.0e-45 184.9 213 46.9
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 1.8e-44 183.7 208 46.6
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 3.0e-44 183.0 212 47.2
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 3.0e-44 183.0 210 47.6
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 8.8e-44 181.4 211 46.9
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 1.5e-43 180.6 211 46.9
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 2.6e-43 179.9 212 45.8
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 2.6e-43 179.9 211 46.4
Potri.008G047400 Populus trichocarpa HOM05D005234 ORTHO05D006583 5.7e-43 178.7 190 51.6
SMO180G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 7.5e-43 178.3 208 46.2
Eucgr.J01148 Eucalyptus grandis HOM05D005234 ORTHO05D006583 9.8e-43 177.9 211 51.2
SMO340G0223 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 2.2e-42 176.8 208 46.2
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 2.2e-42 176.8 215 44.7
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 2.8e-42 176.4 211 45.0
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 4.1e-41 172.6 165 55.8
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 5.4e-41 172.2 165 55.8
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 4.5e-40 169.1 193 50.3
FAN01G2148 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.3e-39 167.5 190 50.5
FAN01G2697 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.3e-39 167.5 190 50.5
Pp3c19_10210 Physcomitrium patens HOM05D005234 ORTHO05D006583 8.6e-39 164.9 205 44.9
Hund06032 Selenicereus undatus HOM05D005234 ORTHO05D006583 8.6e-39 164.9 193 47.2
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 7.3e-38 161.8 207 44.0
ATR0827G035 Amborella trichopoda HOM05D005234 ORTHO05D006583 9.5e-38 161.4 156 55.1
Hma1.2p1_0348F.1_g131710 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 1.6e-37 160.6 144 58.3
Sopen06g012740 Solanum pennellii HOM05D005234 ORTHO05D006583 3.0e-36 156.4 173 49.1
Lj8A92T86 Lonicera japonica HOM05D005234 ORTHO05D006583 3.4e-35 152.9 168 50.0
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.3e-34 151.0 186 46.2
Sc09g0006880 Simmondsia chinensis HOM05D005234 ORTHO05D006583 6.4e-34 148.7 142 54.9
Peaxi162Scf00629g00122 Petunia axillaris HOM05D005234 ORTHO05D006583 1.8e-33 147.1 193 47.2
A09p32550 Brassica napus HOM05D005234 ORTHO05D006583 2.7e-32 143.3 212 41.5
SMO348G0083 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.0e-31 141.4 206 39.3
Atru.chr12.596 Acer truncatum HOM05D005234 ORTHO05D006583 3.6e-29 132.9 124 50.8
Solyc06g036670.2 Solanum lycopersicum HOM05D005234 ORTHO05D006583 4.9e-26 122.5 135 48.9
SMO367G0191 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 8.3e-26 121.7 203 34.0
FAN03G0311 Fragaria x ananassa HOM05D002912 ORTHO05D003191 4.1e-25 119.4 203 41.9
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 2.0e-24 117.1 214 38.3
TAR623G0173 Trochodendron aralioides HOM05D005234 ORTHO05D006583 4.3e-22 109.4 87 60.9
MD01G1117100 Malus domestica HOM05D005234 ORTHO05D006583 6.8e-20 102.1 209 34.9
SMO367G1161 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.7e-18 97.4 118 41.5
FAN10G0581 Fragaria x ananassa HOM05D005234 ORTHO05D006583 2.7e-16 90.1 142 40.1
BolC8t50642H Brassica oleracea HOM05D005234 ORTHO05D006583 4.6e-16 89.4 189 33.9
BolC8t50645H Brassica oleracea HOM05D005234 ORTHO05D006583 4.6e-16 89.4 189 33.9
Mapoly0004s0119 Marchantia polymorpha HOM05D034728 ORTHO05D006583 6.0e-16 89.0 97 47.4
BolC8t50648H Brassica oleracea HOM05D005234 ORTHO05D006583 7.8e-16 88.6 143 39.9
Psat6g238640 Pisum sativum HOM05D005234 ORTHO05D006583 1.0e-15 88.2 87 50.6
FvH4_7g20720 Fragaria vesca HOM05D005234 ORTHO05D006583 1.3e-15 87.8 85 52.9
BcaC07g39828 Brassica carinata HOM05D005234 ORTHO05D006583 3.0e-15 86.7 189 33.3
Mapoly0004s0106 Marchantia polymorpha HOM05D034728 ORTHO05D006583 3.0e-15 86.7 95 46.3
Nitab4.5_0006265g0070 Nicotiana tabacum HOM05D005234 ORTHO05D006583 4.3e-14 82.8 184 33.7
Thecc.10G063300 Theobroma cacao HOM05D005234 ORTHO05D006583 5.6e-14 82.4 85 49.4
MD01G1116800 Malus domestica HOM05D005234 ORTHO05D006583 2.1e-13 80.5 96 49.0
vmacro07107 Vaccinium macrocarpon HOM05D005234 ORTHO05D006583 2.1e-13 80.5 200 34.5
Prupe.2G224300 Prunus persica HOM05D005234 ORTHO05D006583 7.1e-09 65.5 45 68.9
Sc21g0000480 Simmondsia chinensis HOM05D004224 ORTHO05D006437 1.3e-07 61.2 207 28.0
Ciclev10006223m.g Citrus clementina HOM05D005234 ORTHO05D006583 1.1e-06 58.2 41 63.4
CsaV3_7G002430 Cucumis sativus L. HOM05D004224 ORTHO05D006437 1.5e-06 57.8 201 30.3
Ciclev10023738m.g Citrus clementina HOM05D005234 ORTHO05D006583 1.9e-06 57.4 41 63.4
Manes.13G060800 Manihot esculenta HOM05D004224 ORTHO05D006437 1.9e-06 57.4 209 29.2
Medtr3g082690 Medicago truncatula HOM05D004224 ORTHO05D006437 1.9e-06 57.4 207 28.5
PGR031G1258 Punica granatum HOM05D004224 ORTHO05D006437 2.5e-06 57.0 201 28.4
Sed0013057 Sechium edule HOM05D004224 ORTHO05D006437 3.3e-06 56.6 201 29.4
ClCG02G002970 Citrullus lanatus HOM05D004224 ORTHO05D006437 4.3e-06 56.2 201 29.4
MELO3C024188.2 Cucumis melo HOM05D004224 ORTHO05D006437 4.3e-06 56.2 201 30.3
QL04p067662 Quercus lobata HOM05D004224 ORTHO05D006437 4.3e-06 56.2 209 29.2
ATR0751G026 Amborella trichopoda HOM05D004224 ORTHO05D006437 7.3e-06 55.5 67 41.8
MD01G1116200 Malus domestica HOM05D005234 ORTHO05D006583 7.3e-06 55.5 43 62.8


User provided reference genes

Program Settings