Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 5.0e-108 394.4 196 100.0
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 2.2e-23 113.2 79 73.4
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 1.9e-22 110.2 66 75.8
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 2.5e-22 109.8 64 78.1
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 3.2e-22 109.4 66 74.2
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 3.2e-22 109.4 64 76.6
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 4.2e-22 109.0 64 78.1
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 4.2e-22 109.0 64 76.6
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 4.2e-22 109.0 66 72.7
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 5.5e-22 108.6 64 76.6
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.5e-22 108.6 67 73.1
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 5.5e-22 108.6 64 76.6
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 5.5e-22 108.6 64 76.6
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 5.5e-22 108.6 64 76.6
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 5.5e-22 108.6 64 76.6
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 9.3e-22 107.8 62 77.4
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 9.3e-22 107.8 64 75.0
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 9.3e-22 107.8 138 46.4
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 9.3e-22 107.8 64 75.0
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.2e-21 107.5 64 75.0
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.2e-21 107.5 64 75.0
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.2e-21 107.5 64 75.0
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 1.2e-21 107.5 64 75.0
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 1.2e-21 107.5 64 75.0
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 1.6e-21 107.1 66 71.2
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 1.6e-21 107.1 66 71.2
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 1.6e-21 107.1 64 75.0
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.6e-21 107.1 83 62.7
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.6e-21 107.1 135 47.4
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 1.6e-21 107.1 64 75.0
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 2.1e-21 106.7 64 73.4
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 2.1e-21 106.7 64 75.0
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 2.7e-21 106.3 64 73.4
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 2.7e-21 106.3 64 73.4
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 3.5e-21 105.9 64 73.4
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 3.5e-21 105.9 66 69.7
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 4.6e-21 105.5 61 78.7
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.6e-21 105.5 66 69.7
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 4.6e-21 105.5 65 70.8
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 4.6e-21 105.5 63 74.6
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 7.9e-21 104.8 64 75.0
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 7.9e-21 104.8 64 73.4
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 7.9e-21 104.8 64 73.4
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 7.9e-21 104.8 65 73.8
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 1.0e-20 104.4 79 65.8
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 1.0e-20 104.4 65 70.8
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 1.3e-20 104.0 62 74.2
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 1.3e-20 104.0 64 71.9
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.3e-20 104.0 63 73.0
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 1.3e-20 104.0 65 72.3
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 2.3e-20 103.2 64 70.3
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 2.3e-20 103.2 64 70.3
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 2.3e-20 103.2 64 71.9
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 2.3e-20 103.2 64 73.4
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.3e-20 103.2 64 70.3
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 2.3e-20 103.2 124 50.0
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 2.3e-20 103.2 65 69.2
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 2.3e-20 103.2 64 71.9
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 3.0e-20 102.8 64 70.3
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 3.0e-20 102.8 64 68.8
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 3.0e-20 102.8 63 73.0
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 3.0e-20 102.8 63 76.2
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 3.0e-20 102.8 78 65.4
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 3.0e-20 102.8 62 75.8
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 3.9e-20 102.4 62 72.6
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 3.9e-20 102.4 62 72.6
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 3.9e-20 102.4 63 71.4
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 3.9e-20 102.4 64 71.9
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 5.1e-20 102.1 64 71.9
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 5.1e-20 102.1 62 72.6
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 6.7e-20 101.7 64 70.3
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.7e-20 101.7 66 68.2
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.7e-20 101.7 66 68.2
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.7e-20 101.7 66 68.2
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.7e-20 101.7 66 68.2
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 6.7e-20 101.7 63 73.0
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 6.7e-20 101.7 62 71.0
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 8.7e-20 101.3 65 69.2
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 1.1e-19 100.9 62 72.6
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-19 100.5 66 66.7
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.5e-19 100.5 64 70.3
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 1.5e-19 100.5 63 68.3
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.9e-19 100.1 66 66.7
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 2.5e-19 99.8 63 74.6
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.5e-19 99.8 63 69.8
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.3e-19 99.4 66 66.7
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 3.3e-19 99.4 63 71.4
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 4.3e-19 99.0 63 71.4
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 5.7e-19 98.6 117 47.9
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 5.7e-19 98.6 61 73.8
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 7.4e-19 98.2 63 69.8
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 9.7e-19 97.8 66 63.6
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 1.3e-18 97.4 66 65.2
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 1.6e-18 97.1 61 68.9
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 3.7e-18 95.9 66 69.7
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 4.8e-18 95.5 57 71.9
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 8.2e-18 94.7 57 71.9
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 1.4e-17 94.0 76 60.5
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 1.4e-17 94.0 59 69.5
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 1.4e-17 94.0 59 69.5
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 1.8e-17 93.6 59 67.8
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 3.1e-17 92.8 59 66.1
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 3.1e-17 92.8 57 68.4
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 3.1e-17 92.8 58 69.0
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 3.1e-17 92.8 64 64.1
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 1.2e-16 90.9 58 67.2
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.2e-16 90.9 58 67.2
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 1.2e-16 90.9 58 67.2
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 2.0e-16 90.1 60 68.3
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 1.0e-15 87.8 58 63.8
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 2.2e-15 86.7 59 59.3
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 1.9e-14 83.6 50 70.0
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 2.7e-13 79.7 54 66.7
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.6e-13 79.0 66 56.1
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-12 77.4 50 68.0


User provided reference genes

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