Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05824 Sequoiadendron giganteum HOM05D004198 ORTHO05D043385 3.7e-48 195.3 90 100.0
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 4.2e-31 138.7 83 75.9
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 5.4e-31 138.3 83 75.9
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 9.3e-31 137.5 83 72.3
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 1.2e-30 137.1 83 72.3
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 2.1e-30 136.3 88 72.7
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 2.1e-30 136.3 83 74.7
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.1e-30 136.3 83 74.7
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.1e-30 136.3 83 74.7
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.1e-30 136.3 83 74.7
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 3.5e-30 135.6 83 69.9
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 3.5e-30 135.6 83 72.3
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 3.5e-30 135.6 83 74.7
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 4.6e-30 135.2 83 73.5
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 6.0e-30 134.8 83 73.5
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 7.8e-30 134.4 83 73.5
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 7.8e-30 134.4 83 72.3
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 7.8e-30 134.4 83 73.5
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 72.3
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 73.5
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 73.5
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 71.1
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 74.7
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 73.5
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 1.0e-29 134.0 83 77.1
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 1.3e-29 133.7 83 73.5
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.3e-29 133.7 83 71.1
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 71.1
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 72.3
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 69.9
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 69.9
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 72.3
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 72.3
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 1.7e-29 133.3 83 73.5
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 2.3e-29 132.9 83 71.1
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 2.3e-29 132.9 83 72.3
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 2.3e-29 132.9 83 71.1
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 3.0e-29 132.5 84 69.0
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 3.0e-29 132.5 83 71.1
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 3.0e-29 132.5 83 71.1
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.0e-29 132.5 83 71.1
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 3.9e-29 132.1 83 72.3
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 3.9e-29 132.1 83 72.3
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 3.9e-29 132.1 83 72.3
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 3.9e-29 132.1 84 67.9
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 3.9e-29 132.1 83 72.3
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 3.9e-29 132.1 83 74.7
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 3.9e-29 132.1 83 72.3
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 71.1
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 72.3
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 72.3
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 72.3
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 71.1
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 69.9
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 5.1e-29 131.7 83 69.9
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 6.6e-29 131.3 85 70.6
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 8.7e-29 131.0 83 69.9
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 8.7e-29 131.0 83 69.9
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 8.7e-29 131.0 83 69.9
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 8.7e-29 131.0 83 69.9
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 1.1e-28 130.6 83 71.1
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 1.1e-28 130.6 83 72.3
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 1.5e-28 130.2 83 69.9
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 1.5e-28 130.2 83 69.9
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 1.9e-28 129.8 83 69.9
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 1.9e-28 129.8 83 68.7
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 1.9e-28 129.8 83 71.1
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 1.9e-28 129.8 83 69.9
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 1.9e-28 129.8 83 68.7
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 71.1
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 67.5
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 68.7
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 68.7
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 68.7
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 71.1
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 2.5e-28 129.4 83 72.3
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 4.3e-28 128.6 83 71.1
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 4.3e-28 128.6 83 68.7
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 4.3e-28 128.6 83 68.7
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 5.6e-28 128.3 84 69.0
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 7.3e-28 127.9 83 71.1
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 7.3e-28 127.9 83 68.7
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 7.3e-28 127.9 83 68.7
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 7.3e-28 127.9 83 68.7
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 7.3e-28 127.9 83 67.5
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 9.6e-28 127.5 83 68.7
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 9.6e-28 127.5 83 68.7
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 9.6e-28 127.5 85 68.2
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 1.3e-27 127.1 85 65.9
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 1.3e-27 127.1 83 68.7
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 1.3e-27 127.1 83 67.5
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.6e-27 126.7 83 67.5
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 2.8e-27 125.9 83 67.5
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 2.8e-27 125.9 85 64.7
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 2.8e-27 125.9 83 68.7
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 2.8e-27 125.9 88 64.8
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 2.8e-27 125.9 83 67.5
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 3.6e-27 125.6 83 68.7
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 3.6e-27 125.6 83 67.5
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 4.8e-27 125.2 83 67.5
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 4.8e-27 125.2 83 67.5
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 6.2e-27 124.8 83 66.3
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 8.1e-27 124.4 83 66.3
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 1.1e-26 124.0 83 67.5
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 1.4e-26 123.6 86 66.3
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 1.4e-26 123.6 83 67.5
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 1.8e-26 123.2 93 61.3
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 2.4e-26 122.9 84 64.3
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 2.4e-26 122.9 84 67.9
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 6.9e-26 121.3 79 70.9
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 6.9e-26 121.3 83 63.9
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 6.9e-26 121.3 83 65.1
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 1.2e-25 120.6 83 65.1
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 3.8e-24 115.5 104 55.8
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 4.6e-22 108.6 83 61.4
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 3.0e-21 105.9 77 67.5
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 3.1e-18 95.9 75 60.0
PSO135G0878 Papaver somniferum HOM05D004198 ORTHO05D000955 5.8e-17 91.7 83 57.8
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 7.9e-14 81.3 83 48.2
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 7.9e-14 81.3 83 48.2
CANSAT25G3628 Cannabis sativa HOM05D004198 ORTHO05D043385 4.8e-11 72.0 58 55.2
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 2.0e-09 66.6 118 33.9


User provided reference genes

Program Settings