Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05556 Sequoiadendron giganteum HOM05D000943 ORTHO05D008314 4.3e-118 427.9 209 100.0
SEGI_39487 Sequoiadendron giganteum HOM05D000943 ORTHO05D008314 2.0e-75 286.2 208 70.2
Pp3c18_12460 Physcomitrium patens HOM05D000943 ORTHO05D008314 2.6e-22 109.8 75 69.3
MBI02_g32395_MAGBIO Magnolia biondii HOM05D000943 ORTHO05D008314 1.3e-21 107.5 79 62.0
MBI02_g32396_MAGBIO Magnolia biondii HOM05D000943 ORTHO05D008314 1.3e-21 107.5 90 57.8
SMO367G0186 Selaginella moellendorffii HOM05D000943 ORTHO05D008314 1.4e-20 104.0 85 54.1
Thecc.07G135000 Theobroma cacao HOM05D000943 ORTHO05D008314 7.1e-20 101.7 154 39.6
Os04g0381100 Oryza sativa ssp. japonica HOM05D000943 ORTHO05D008314 2.1e-19 100.1 83 60.2
CANSAT56G1032 Cannabis sativa HOM05D000943 ORTHO05D008314 3.5e-19 99.4 74 62.2
HanXRQChr10g0305601 Helianthus annuus HOM05D000943 ORTHO05D008314 3.5e-19 99.4 91 51.6
Aa31LG4G2410 Aethionema arabicum HOM05D000943 ORTHO05D008314 4.6e-19 99.0 147 38.8
Aqoxy1G01881 Aquilegia oxysepala HOM05D000943 ORTHO05D008314 4.6e-19 99.0 90 54.4
CDE05G2171 Ceratophyllum demersum HOM05D000943 ORTHO05D008314 4.6e-19 99.0 83 57.8
Lj1A822T51 Lonicera japonica HOM05D000943 ORTHO05D008314 4.6e-19 99.0 87 55.2
Ciclev10020318m.g Citrus clementina HOM05D000943 ORTHO05D008314 7.9e-19 98.2 74 56.8
VMungo1080G0956 Vigna mungo HOM05D000943 ORTHO05D008314 7.9e-19 98.2 130 43.1
COL.COLO4_03605 Corchorus olitorius HOM05D000943 ORTHO05D008314 1.0e-18 97.8 78 53.8
Haze_08446 Corylus avellana HOM05D000943 ORTHO05D008314 1.0e-18 97.8 74 59.5
ClCG11G017120 Citrullus lanatus HOM05D000943 ORTHO05D008314 1.3e-18 97.4 74 58.1
Sopen12g001380 Solanum pennellii HOM05D000943 ORTHO05D008314 1.3e-18 97.4 136 38.2
Eucgr.F03227 Eucalyptus grandis HOM05D000943 ORTHO05D008314 1.8e-18 97.1 74 55.4
Gohir.D01G037600 Gossypium hirsutum HOM05D000943 ORTHO05D008314 1.8e-18 97.1 74 58.1
Gorai.002G045800 Gossypium raimondii HOM05D000943 ORTHO05D008314 1.8e-18 97.1 74 58.1
Gohir.A01G046900 Gossypium hirsutum HOM05D000943 ORTHO05D008314 3.0e-18 96.3 74 58.1
TAR629G1459 Trochodendron aralioides HOM05D000943 ORTHO05D008314 3.0e-18 96.3 88 56.8
MELO3C025675.2 Cucumis melo HOM05D000943 ORTHO05D008314 3.9e-18 95.9 74 56.8
CsaV3_4G032780 Cucumis sativus L. HOM05D000943 ORTHO05D008314 3.9e-18 95.9 74 56.8
vmacro09420 Vaccinium macrocarpon HOM05D000943 ORTHO05D008314 3.9e-18 95.9 88 52.3
Dinv26700 Davidia involucrata HOM05D000943 ORTHO05D006658 6.7e-18 95.1 87 54.0
SalBow8G5603 Salvia bowleyana HOM05D000943 ORTHO05D008314 6.7e-18 95.1 95 46.3
Migut.M00688 Erythranthe guttata HOM05D000943 ORTHO05D008314 8.7e-18 94.7 74 56.8
Medtr2g073080 Medicago truncatula HOM05D000943 ORTHO05D008314 8.7e-18 94.7 171 38.6
THA.LOC104812302 Tarenaya hassleriana HOM05D000943 ORTHO05D008314 8.7e-18 94.7 74 54.1
Cc05_g10620 Coffea canephora HOM05D000943 ORTHO05D008314 1.1e-17 94.4 90 50.0
RhsimUnG0206100 Rhododendron simsii HOM05D000943 ORTHO05D008314 1.1e-17 94.4 83 50.6
Sc16g0007780 Simmondsia chinensis HOM05D000943 ORTHO05D008314 1.1e-17 94.4 80 57.5
Sp5g33650 Schrenkiella parvula HOM05D000943 ORTHO05D008314 1.5e-17 94.0 84 53.6
GSVIVG01014085001 Vitis vinifera HOM05D000943 ORTHO05D008314 1.5e-17 94.0 90 51.1
Nitab4.5_0001386g0010 Nicotiana tabacum HOM05D000943 ORTHO05D008314 1.9e-17 93.6 173 32.9
AT1G78560 Arabidopsis thaliana HOM05D000943 ORTHO05D008314 2.5e-17 93.2 74 56.8
Nn3g20955 Nelumbo nucifera HOM05D000943 ORTHO05D008314 2.5e-17 93.2 79 58.2
Peaxi162Scf00000g76016 Petunia axillaris HOM05D000943 ORTHO05D008314 2.5e-17 93.2 80 52.5
Sed0007276 Sechium edule HOM05D000943 ORTHO05D008314 2.5e-17 93.2 74 56.8
CARHR072050 Cardamine hirsuta HOM05D000943 ORTHO05D008314 3.3e-17 92.8 74 56.8
Lsat_1_v5_gn_5_126301 Lactuca sativa HOM05D000943 ORTHO05D008314 3.3e-17 92.8 74 56.8
Prupe.4G155400 Prunus persica HOM05D000943 ORTHO05D008314 3.3e-17 92.8 170 36.5
unitig_62.g23077 Utricularia gibba HOM05D000943 ORTHO05D008314 3.3e-17 92.8 74 56.8
Aa31LG4G2400 Aethionema arabicum HOM05D000943 ORTHO05D008314 4.3e-17 92.4 79 55.7
arahy.Tifrunner.gnm1.ann1.BUF90N Arachis hypogaea HOM05D000943 ORTHO05D008314 4.3e-17 92.4 74 58.1
Solyc12g005410.2 Solanum lycopersicum HOM05D000943 ORTHO05D008314 4.3e-17 92.4 99 44.4
ATR0763G119 Amborella trichopoda HOM05D000943 ORTHO05D008314 5.7e-17 92.0 83 54.2
EL10Ac4g08437 Beta vulgaris HOM05D000943 ORTHO05D008314 5.7e-17 92.0 103 43.7
Cpa.g.sc682.5 Carica papaya HOM05D000943 ORTHO05D008314 5.7e-17 92.0 73 53.4
Carub.0002s2541 Capsella rubella HOM05D000943 ORTHO05D008314 7.4e-17 91.7 140 40.0
Mapoly0050s0070 Marchantia polymorpha HOM05D000943 ORTHO05D008314 7.4e-17 91.7 83 53.0
Oeu010037.1 Olea europaea HOM05D000943 ORTHO05D008314 7.4e-17 91.7 74 52.7
PGSC0003DMG400019027 Solanum tuberosum HOM05D000943 ORTHO05D008314 7.4e-17 91.7 99 44.4
AagrBONN_evm.TU.Sc2ySwM_362.489 Anthoceros agrestis HOM05D000943 ORTHO05D008314 9.6e-17 91.3 90 46.7
arahy.Tifrunner.gnm1.ann1.WT9QCD Arachis hypogaea HOM05D000943 ORTHO05D008314 1.3e-16 90.9 74 58.1
Thhalv10018656m.g Eutrema salsugineum HOM05D000943 ORTHO05D008314 1.3e-16 90.9 74 55.4
MD11G1271200 Malus domestica HOM05D000943 ORTHO05D008314 1.3e-16 90.9 74 56.8
PSO675G4586 Papaver somniferum HOM05D000943 ORTHO05D008314 1.3e-16 90.9 92 48.9
AL2G38960 Arabidopsis lyrata HOM05D000943 ORTHO05D008314 1.6e-16 90.5 74 54.1
Glyma.13G264300 Glycine max HOM05D000943 ORTHO05D008314 2.1e-16 90.1 89 50.6
SGA_v2.0_scaffold73G24378 Striga asiatica HOM05D000943 ORTHO05D008314 2.1e-16 90.1 73 54.8
TWI38G0474 Tripterygium wilfordii HOM05D000943 ORTHO05D008314 2.1e-16 90.1 74 55.4
PGR031G3430 Punica granatum HOM05D000943 ORTHO05D008314 2.8e-16 89.7 74 51.4
TPR.G35008 Trifolium pratense HOM05D000943 ORTHO05D008314 4.8e-16 89.0 158 38.0
Lj3g0014038 Lotus japonicus HOM05D000943 ORTHO05D008314 6.2e-16 88.6 74 55.4
MD03G1251200 Malus domestica HOM05D000943 ORTHO05D008314 8.2e-16 88.2 74 55.4
Manes.03G078100 Manihot esculenta HOM05D000943 ORTHO05D008314 8.2e-16 88.2 74 54.1
Nitab4.5_0000092g0190 Nicotiana tabacum HOM05D000943 ORTHO05D008314 8.2e-16 88.2 84 50.0
DCAR_017587 Daucus carota HOM05D000943 ORTHO05D008314 1.1e-15 87.8 154 33.8
BcaC08g47434 Brassica carinata HOM05D000943 ORTHO05D008314 1.8e-15 87.0 74 55.4
C06p52460 Brassica napus HOM05D000943 ORTHO05D008314 2.4e-15 86.7 74 55.4
Psat1g007600 Pisum sativum HOM05D000943 ORTHO05D008314 2.4e-15 86.7 74 52.7
BolC6t40265H Brassica oleracea HOM05D000943 ORTHO05D008314 3.1e-15 86.3 74 54.1
A07p43810 Brassica napus HOM05D000943 ORTHO05D008314 4.0e-15 85.9 74 54.1
BraA07t31890Z Brassica rapa HOM05D000943 ORTHO05D008314 4.0e-15 85.9 74 54.1
Phvul.005G076100 Phaseolus vulgaris HOM05D000943 ORTHO05D008314 5.3e-15 85.5 89 47.2
Potri.011G103200 Populus trichocarpa HOM05D000943 ORTHO05D008314 6.9e-15 85.1 71 56.3
Ca_03924_v3 Cicer arietinum L. HOM05D000943 ORTHO05D008314 9.0e-15 84.7 74 52.7
Ah.04g163940 Amaranthus hybridus HOM05D000943 ORTHO05D008314 1.2e-14 84.3 80 46.2
arahy.Tifrunner.gnm1.ann1.A1RUKD Arachis hypogaea HOM05D000943 ORTHO05D008314 1.2e-14 84.3 74 52.7
arahy.Tifrunner.gnm1.ann1.AVJ0IE Arachis hypogaea HOM05D000943 ORTHO05D008314 1.2e-14 84.3 74 52.7
PSO541G4101 Papaver somniferum HOM05D000943 ORTHO05D008314 1.2e-14 84.3 92 44.6
Sabra11G0082400 Salix brachista HOM05D000943 ORTHO05D008314 1.2e-14 84.3 73 52.1
Lalb_Chr01g0016271 Lupinus albus HOM05D000943 ORTHO05D008314 1.5e-14 84.0 96 43.8
PSO675G8358 Papaver somniferum HOM05D000943 ORTHO05D008314 1.5e-14 84.0 89 46.1
AUR62013941 Chenopodium quinoa HOM05D000943 ORTHO05D008314 2.6e-14 83.2 70 54.3
Sabra11G0077500 Salix brachista HOM05D000943 ORTHO05D008314 2.6e-14 83.2 73 50.7
FAN21G2606 Fragaria x ananassa HOM05D000943 ORTHO05D008314 4.5e-14 82.4 71 53.5
AUR62019668 Chenopodium quinoa HOM05D000943 ORTHO05D008314 7.6e-14 81.6 70 52.9
RcHm_v2.0_Chr5g0029301 Rosa chinensis HOM05D000943 ORTHO05D008314 7.6e-14 81.6 71 54.9
Hund10402 Selenicereus undatus HOM05D000943 ORTHO05D008314 7.6e-14 81.6 80 48.8
FAN25G0219 Fragaria x ananassa HOM05D000943 ORTHO05D008314 1.0e-13 81.3 71 53.5
FvH4_3g17590 Fragaria vesca HOM05D000943 ORTHO05D008314 1.3e-13 80.9 71 53.5
FAN11G0107 Fragaria x ananassa HOM05D000943 ORTHO05D008314 1.3e-13 80.9 71 53.5
FAN16G1964 Fragaria x ananassa HOM05D000943 ORTHO05D008314 1.3e-13 80.9 71 53.5
Medtr2g073190 Medicago truncatula HOM05D000943 ORTHO05D008314 8.4e-13 78.2 71 52.1
VMungo1080G0497 Vigna mungo HOM05D000943 ORTHO05D008314 5.5e-12 75.5 73 47.9
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 6.1e-11 72.0 56 57.1
MD03G1250900 Malus domestica HOM05D000943 ORTHO05D008314 5.7e-09 65.5 58 48.3
Cre17.g725650 Chlamydomonas reinhardtii HOM05D000943 ORTHO05D008314 3.4e-06 56.2 68 48.5


User provided reference genes

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