Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05476 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 0.0e+00 1123.6 572 100.0
Mapoly0046s0104 Marchantia polymorpha HOM05D003999 ORTHO05D005219 1.2e-40 172.2 261 37.9
SMO117G0282 Selaginella moellendorffii HOM05D003999 ORTHO05D005219 1.1e-35 155.6 263 37.3
Aqoxy7G02806 Aquilegia oxysepala HOM05D003999 ORTHO05D005219 1.5e-35 155.2 314 33.1
Actinidia29951 Actinidia chinensis HOM05D003999 ORTHO05D005219 8.2e-34 149.4 279 33.7
ATR0626G364 Amborella trichopoda HOM05D003999 ORTHO05D005219 1.4e-33 148.7 306 35.3
MBI13_g34042_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 3.1e-33 147.5 327 33.6
ATR0681G357 Amborella trichopoda HOM05D003999 ORTHO05D005219 4.1e-33 147.1 276 35.1
Thecc.09G004800 Theobroma cacao HOM05D003999 ORTHO05D005219 6.9e-33 146.4 275 35.3
MSTRG.26544 Avicennia marina HOM05D003999 ORTHO05D005219 2.0e-32 144.8 335 31.3
MBI16_g05835_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 2.6e-32 144.4 241 37.8
Haze_18974 Corylus avellana HOM05D003999 ORTHO05D005219 4.5e-32 143.7 299 31.1
Dinv41175 Davidia involucrata HOM05D003999 ORTHO05D005219 7.6e-32 142.9 308 32.8
SEGI_29375 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 3.8e-31 140.6 271 34.3
Thecc.10G174600 Theobroma cacao HOM05D003999 ORTHO05D005219 5.0e-31 140.2 336 30.1
Nn8g40781 Nelumbo nucifera HOM05D003999 ORTHO05D005219 1.4e-30 138.7 333 31.8
Duzib114G0910 Durio zibethinus HOM05D003999 ORTHO05D005219 3.2e-30 137.5 320 31.6
Rhsim03G0266100 Rhododendron simsii HOM05D003999 ORTHO05D005219 3.2e-30 137.5 245 34.7
Atru.chr7.755 Acer truncatum HOM05D003999 ORTHO05D005219 5.5e-30 136.7 330 31.5
Atru.chr7.776 Acer truncatum HOM05D003999 ORTHO05D005219 5.5e-30 136.7 330 31.5
Peaxi162Scf00670g00347 Petunia axillaris HOM05D003999 ORTHO05D005219 5.5e-30 136.7 278 32.0
Haze_18980 Corylus avellana HOM05D003999 ORTHO05D005219 7.2e-30 136.3 317 30.3
Cfa020676 Carpinus fangiana HOM05D003999 ORTHO05D005219 9.3e-30 136.0 292 31.5
Duzib106G1697 Durio zibethinus HOM05D003999 ORTHO05D005219 9.3e-30 136.0 322 29.8
Gorai.011G210800 Gossypium raimondii HOM05D003999 ORTHO05D005219 9.3e-30 136.0 322 30.7
CDE06G2299 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 1.6e-29 135.2 259 32.4
TAR625G1146 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.6e-29 135.2 311 31.5
Manes.06G019800 Manihot esculenta HOM05D003999 ORTHO05D005219 2.1e-29 134.8 268 31.7
PSO170G0656 Papaver somniferum HOM05D003999 ORTHO05D005219 2.1e-29 134.8 232 33.6
Gohir.A06G176100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 2.7e-29 134.4 332 30.7
Actinidia38494 Actinidia chinensis HOM05D003999 ORTHO05D005219 3.5e-29 134.0 346 30.1
Cc06_g20850 Coffea canephora HOM05D003999 ORTHO05D005219 3.5e-29 134.0 311 32.8
Lj1g0014223 Lotus japonicus HOM05D003999 ORTHO05D005219 3.5e-29 134.0 271 31.0
DCAR_014666 Daucus carota HOM05D003999 ORTHO05D005219 4.6e-29 133.7 264 31.8
vmacro05997 Vaccinium macrocarpon HOM05D003999 ORTHO05D005219 4.6e-29 133.7 267 32.6
Ca_15280_v3 Cicer arietinum L. HOM05D003999 ORTHO05D005219 6.1e-29 133.3 270 31.1
FAN04G0885 Fragaria x ananassa HOM05D003999 ORTHO05D005219 6.1e-29 133.3 350 29.4
FAN18G4269 Fragaria x ananassa HOM05D003999 ORTHO05D005219 6.1e-29 133.3 325 29.8
Gohir.D10G188000 Gossypium hirsutum HOM05D003999 ORTHO05D005219 6.1e-29 133.3 323 31.3
MD13G1241700 Malus domestica HOM05D003999 ORTHO05D005219 6.1e-29 133.3 326 30.1
RcHm_v2.0_Chr7g0219501 Rosa chinensis HOM05D003999 ORTHO05D005219 6.1e-29 133.3 353 29.7
Cfa013453 Carpinus fangiana HOM05D003999 ORTHO05D005219 7.9e-29 132.9 315 29.8
Ciclev10010423m.g Citrus clementina HOM05D003999 ORTHO05D005219 1.3e-28 132.1 339 30.1
Gohir.A10G181100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 1.3e-28 132.1 321 29.9
Sopen02g019140 Solanum pennellii HOM05D003999 ORTHO05D005219 1.3e-28 132.1 251 34.3
Sed0015737 Sechium edule HOM05D003999 ORTHO05D005219 2.3e-28 131.3 281 32.0
Gohir.D06G185700 Gossypium hirsutum HOM05D003999 ORTHO05D005219 3.0e-28 131.0 332 30.4
Potri.006G277400 Populus trichocarpa HOM05D003999 ORTHO05D005219 3.0e-28 131.0 300 31.3
CiPaw.07G197100 Carya illinoinensis HOM05D003999 ORTHO05D005219 5.1e-28 130.2 322 29.2
Prupe.1G075400 Prunus persica HOM05D003999 ORTHO05D005219 5.1e-28 130.2 326 29.4
Zm00001eb274650 Zea mays HOM05D003999 ORTHO05D005219 5.1e-28 130.2 280 31.8
CiPaw.15G150400 Carya illinoinensis HOM05D003999 ORTHO05D005219 6.7e-28 129.8 271 31.0
CDE02G3353 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 6.7e-28 129.8 246 32.9
Sabra06G0056300 Salix brachista HOM05D003999 ORTHO05D005219 6.7e-28 129.8 321 32.1
Gorai.010G217300 Gossypium raimondii HOM05D003999 ORTHO05D005219 8.7e-28 129.4 332 30.4
COL.COLO4_08503 Corchorus olitorius HOM05D003999 ORTHO05D005219 1.1e-27 129.0 280 31.8
Migut.J00798 Erythranthe guttata HOM05D003999 ORTHO05D005219 1.5e-27 128.6 305 29.2
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea HOM05D003999 ORTHO05D005219 1.9e-27 128.3 268 29.9
Ciclev10008331m.g Citrus clementina HOM05D003999 ORTHO05D005219 1.9e-27 128.3 290 30.0
Migut.L01882 Erythranthe guttata HOM05D003999 ORTHO05D005219 1.9e-27 128.3 265 30.9
FAN13G0316 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.9e-27 128.3 324 28.7
Sed0001699 Sechium edule HOM05D003999 ORTHO05D005219 2.5e-27 127.9 325 29.5
CAN.G79.26 Capsicum annuum HOM05D003999 ORTHO05D005219 3.3e-27 127.5 483 29.0
TWI63G1413 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 3.3e-27 127.5 348 29.6
Os04g0425100 Oryza sativa ssp. japonica HOM05D003999 ORTHO05D005219 5.7e-27 126.7 288 33.3
Glyma.04G001900 Glycine max HOM05D003999 ORTHO05D005219 7.4e-27 126.3 312 29.5
Hund06701 Selenicereus undatus HOM05D003999 ORTHO05D005219 7.4e-27 126.3 272 29.8
AUR62027455 Chenopodium quinoa HOM05D003999 ORTHO05D005219 9.7e-27 125.9 307 29.3
Potri.018G142300 Populus trichocarpa HOM05D003999 ORTHO05D005219 9.7e-27 125.9 261 33.0
Lalb_Chr11g0061221 Lupinus albus HOM05D003999 ORTHO05D005219 1.3e-26 125.6 461 26.9
Thhalv10022602m.g Eutrema salsugineum HOM05D003999 ORTHO05D005219 2.2e-26 124.8 348 27.6
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla HOM05D003999 ORTHO05D005219 2.2e-26 124.8 317 29.3
Zm00001eb002000 Zea mays HOM05D003999 ORTHO05D005219 2.8e-26 124.4 303 32.3
Psat5g048320 Pisum sativum HOM05D003999 ORTHO05D005219 3.7e-26 124.0 320 28.4
HanXRQChr09g0244721 Helianthus annuus HOM05D003999 ORTHO05D005219 6.3e-26 123.2 335 29.3
Glyma.06G001400 Glycine max HOM05D003999 ORTHO05D005219 8.2e-26 122.9 313 27.8
THA.LOC104814650 Tarenaya hassleriana HOM05D003999 ORTHO05D005219 8.2e-26 122.9 305 32.1
EL10Ac8g19270 Beta vulgaris HOM05D003999 ORTHO05D005219 1.4e-25 122.1 267 31.5
Eucgr.C02221 Eucalyptus grandis HOM05D003999 ORTHO05D005219 1.8e-25 121.7 273 30.4
SGA_v2.0_scaffold231G43410 Striga asiatica HOM05D003999 ORTHO05D005219 1.8e-25 121.7 337 29.1
MELO3C017428.2 Cucumis melo HOM05D003999 ORTHO05D005219 2.4e-25 121.3 313 29.4
Solyc02g069980.4 Solanum lycopersicum HOM05D003999 ORTHO05D005219 2.4e-25 121.3 226 33.2
AL3G49030 Arabidopsis lyrata HOM05D003999 ORTHO05D005219 3.1e-25 120.9 276 31.5
ECA240G0372 Erigeron canadensis HOM05D003999 ORTHO05D005219 3.1e-25 120.9 331 29.0
Carub.0003s3349 Capsella rubella HOM05D003999 ORTHO05D005219 4.1e-25 120.6 303 29.7
AUR62031249 Chenopodium quinoa HOM05D003999 ORTHO05D005219 4.1e-25 120.6 308 28.9
Lsat_1_v5_gn_7_51121 Lactuca sativa HOM05D003999 ORTHO05D005219 4.1e-25 120.6 230 33.9
Medtr3g100350 Medicago truncatula HOM05D003999 ORTHO05D005219 6.9e-25 119.8 270 30.4
BcaC04g22860 Brassica carinata HOM05D003999 ORTHO05D005219 9.0e-25 119.4 250 32.0
TPR.G6349 Trifolium pratense HOM05D003999 ORTHO05D005219 9.0e-25 119.4 278 29.1
TWI34G1954 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 9.0e-25 119.4 285 30.2
A07p01530 Brassica napus HOM05D003999 ORTHO05D005219 1.5e-24 118.6 262 30.5
BolC9t54356H Brassica oleracea HOM05D003999 ORTHO05D005219 1.5e-24 118.6 250 32.0
BraA07t27954Z Brassica rapa HOM05D003999 ORTHO05D005219 1.5e-24 118.6 262 30.5
CsaV3_1G031880 Cucumis sativus L. HOM05D003999 ORTHO05D005219 2.0e-24 118.2 329 28.6
Nitab4.5_0001225g0140 Nicotiana tabacum HOM05D003999 ORTHO05D005219 4.5e-24 117.1 302 30.8
Sc08g0004740 Simmondsia chinensis HOM05D003999 ORTHO05D005219 4.5e-24 117.1 267 28.8
AT2G19260 Arabidopsis thaliana HOM05D003999 ORTHO05D005219 5.9e-24 116.7 303 26.7
Potri.006G075400 Populus trichocarpa HOM05D003999 ORTHO05D005219 5.9e-24 116.7 326 29.1
C07p03110 Brassica napus HOM05D003999 ORTHO05D005219 1.7e-23 115.2 233 32.6
BolC7t40703H Brassica oleracea HOM05D003999 ORTHO05D005219 1.7e-23 115.2 233 32.6
DCAR_020148 Daucus carota HOM05D003999 ORTHO05D005219 1.7e-23 115.2 236 31.4
BcaB03g16715 Brassica carinata HOM05D003999 ORTHO05D005219 2.2e-23 114.8 236 33.1
BcaC06g36543 Brassica carinata HOM05D003999 ORTHO05D005219 2.2e-23 114.8 233 32.2
Sabra18G0116200 Salix brachista HOM05D003999 ORTHO05D005219 2.2e-23 114.8 342 28.7
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea HOM05D003999 ORTHO05D005219 3.8e-23 114.0 282 28.7
DCAR_018034 Daucus carota HOM05D003999 ORTHO05D005219 3.8e-23 114.0 223 33.6
Nitab4.5_0001583g0100 Nicotiana tabacum HOM05D003999 ORTHO05D005219 5.0e-23 113.6 320 30.3
C09p14530 Brassica napus HOM05D003999 ORTHO05D005219 8.5e-23 112.8 233 31.3
TAR383G0399 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.9e-22 111.7 279 29.0
BcaB07g31614 Brassica carinata HOM05D003999 ORTHO05D005219 2.5e-22 111.3 235 31.1
CARHR109720 Cardamine hirsuta HOM05D003999 ORTHO05D005219 2.5e-22 111.3 223 32.7
Sabra06G0215100 Salix brachista HOM05D003999 ORTHO05D005219 1.2e-21 109.0 314 27.4
Phvul.009G117100 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 1.6e-21 108.6 395 26.8
VMungo1309G0585 Vigna mungo HOM05D003999 ORTHO05D005219 1.6e-21 108.6 435 25.5
TAR626G1281 Trochodendron aralioides HOM05D003999 ORTHO05D005219 2.7e-21 107.8 360 27.2
MD16G1248600 Malus domestica HOM05D003999 ORTHO05D005219 7.9e-21 106.3 326 27.6
Sp3g32620 Schrenkiella parvula HOM05D003999 ORTHO05D005219 7.9e-21 106.3 492 23.6
unitig_578.g16064 Utricularia gibba HOM05D003999 ORTHO05D005219 1.4e-20 105.5 325 28.0
unitig_8.g4939 Utricularia gibba HOM05D003999 ORTHO05D005219 1.8e-20 105.1 274 29.6
FAN08G2100 Fragaria x ananassa HOM05D003999 ORTHO05D005219 2.3e-20 104.8 350 26.6
FvH4_5g27730 Fragaria vesca HOM05D003999 ORTHO05D005219 3.9e-20 104.0 350 26.3
Atru.chr7.2670 Acer truncatum HOM05D003999 ORTHO05D005219 6.7e-20 103.2 242 27.7
SEGI_17596 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 6.3e-18 96.7 166 36.1
Aa31LG8G16300 Aethionema arabicum HOM05D003999 ORTHO05D005219 8.2e-18 96.3 236 28.8
CiPaw.08G032500 Carya illinoinensis HOM05D003999 ORTHO05D005219 2.4e-17 94.7 320 27.5
GSVIVG01010859001 Vitis vinifera HOM05D003999 ORTHO05D005219 5.3e-17 93.6 173 35.8
SalBow5G4070 Salvia bowleyana HOM05D003999 ORTHO05D005219 3.4e-16 90.9 166 36.1
ECA234G1030 Erigeron canadensis HOM05D003999 ORTHO05D005219 4.5e-16 90.5 162 36.4
CSS0024594 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 2.2e-15 88.2 229 29.3
GSVIVG01035550001 Vitis vinifera HOM05D003999 ORTHO05D005219 6.5e-15 86.7 99 40.4
MSTRG.10442 Avicennia marina HOM05D003999 ORTHO05D005219 5.5e-14 83.6 90 46.7
ClCG06G013610 Citrullus lanatus HOM05D003999 ORTHO05D005219 2.1e-13 81.6 75 45.3
Haze_22020 Corylus avellana HOM05D003999 ORTHO05D005219 4.7e-13 80.5 281 26.3
Cc00_g03720 Coffea canephora HOM05D003999 ORTHO05D005219 1.8e-12 78.6 270 28.9
Cfa020674 Carpinus fangiana HOM05D003999 ORTHO05D005219 3.9e-12 77.4 67 49.3
Oeu064556.1 Olea europaea HOM05D003999 ORTHO05D005219 4.4e-11 73.9 199 29.6
Actinidia27131 Actinidia chinensis HOM05D003999 ORTHO05D005219 9.7e-11 72.8 149 31.5
CSS0017119 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 4.8e-10 70.5 217 22.1
MBI16_g10833_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 9.1e-09 66.2 133 32.3
MCO11G336 Micromonas commoda HOM05D004258 ORTHO05D005219 1.1e-06 59.3 53 45.3
SEGI_33965 Sequoiadendron giganteum HOM05D000108 ORTHO05D009193 1.1e-06 59.3 42 78.6
SEGI_02055 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.5e-06 58.2 43 74.4
SEGI_21022 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.5e-06 58.2 43 74.4
HPP92_010790 Vanilla planifolia HOM05D003999 ORTHO05D005219 2.5e-06 58.2 207 25.6
Prupe.5G240400 Prunus persica HOM05D003999 ORTHO05D005219 9.4e-06 56.2 120 30.8


User provided reference genes

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