Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05304 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 9.7e-74 280.0 139 100.0
SEGI_00612 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.7e-70 269.2 139 95.7
SEGI_34399 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 4.3e-37 158.3 147 62.6
SEGI_05342 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 7.3e-29 131.0 146 51.4
SEGI_05736 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 7.3e-29 131.0 146 51.4
SEGI_40027 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 7.3e-29 131.0 146 51.4
SEGI_40545 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 2.8e-28 129.0 149 53.0
SEGI_11986 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 7.1e-16 87.8 100 50.0
ATR0737G061 Amborella trichopoda HOM05D001435 ORTHO05D001304 4.2e-08 62.0 38 73.7
Sp1g41020 Schrenkiella parvula HOM05D001435 ORTHO05D001304 4.2e-08 62.0 133 35.3
SEGI_15756 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 7.1e-08 61.2 66 47.0
Thhalv10011785m.g Eutrema salsugineum HOM05D001435 ORTHO05D001304 2.7e-07 59.3 133 33.8
TPR.G5908 Trifolium pratense HOM05D001435 ORTHO05D001304 3.5e-07 58.9 106 34.9
Atru.chr5.2888 Acer truncatum HOM05D005378 ORTHO05D037884 6.0e-07 58.2 43 58.1
Cpa.g.sc119.41 Carica papaya HOM05D001435 ORTHO05D001304 1.3e-06 57.0 56 51.8
PSO339G3326 Papaver somniferum HOM05D001435 ORTHO05D001304 1.3e-06 57.0 33 75.8
PSO384G0980 Papaver somniferum HOM05D001435 ORTHO05D001304 1.3e-06 57.0 33 75.8
MD12G1004300 Malus domestica HOM05D001435 ORTHO05D001304 1.7e-06 56.6 72 43.1
SMO118G0421 Selaginella moellendorffii HOM05D001435 ORTHO05D001304 1.7e-06 56.6 36 69.4
Thecc.02G000400 Theobroma cacao HOM05D001435 ORTHO05D001304 1.7e-06 56.6 38 63.2
CiPaw.14G136800 Carya illinoinensis HOM05D001435 ORTHO05D001304 2.3e-06 56.2 112 34.8
ClCG03G014530 Citrullus lanatus HOM05D001435 ORTHO05D001304 2.3e-06 56.2 141 30.5
Lalb_Chr22g0359121 Lupinus albus HOM05D001435 ORTHO05D001304 2.3e-06 56.2 97 39.2
Pp3c1_33320 Physcomitrium patens HOM05D001435 ORTHO05D001304 2.3e-06 56.2 125 32.8
CANSAT11G2351 Cannabis sativa HOM05D001435 ORTHO05D001304 3.0e-06 55.8 143 31.5
CsaV3_1G041660 Cucumis sativus L. HOM05D001435 ORTHO05D001304 3.0e-06 55.8 141 29.8
SEGI_06078 Sequoiadendron giganteum HOM05D001435 ORTHO05D001304 3.0e-06 55.8 50 50.0
TPR.G19828 Trifolium pratense HOM05D001435 ORTHO05D001304 3.0e-06 55.8 71 42.3
Aa31LG9G8560 Aethionema arabicum HOM05D001435 ORTHO05D001304 3.9e-06 55.5 55 47.3
CDE10G0959 Ceratophyllum demersum HOM05D001435 ORTHO05D001304 3.9e-06 55.5 75 38.7
Mapoly0028s0111 Marchantia polymorpha HOM05D001435 ORTHO05D001304 3.9e-06 55.5 43 55.8
Pp3c6_15840 Physcomitrium patens HOM05D001435 ORTHO05D001304 3.9e-06 55.5 38 60.5
CANSAT35G0446 Cannabis sativa HOM05D001435 ORTHO05D001304 5.1e-06 55.1 38 60.5
Carub.0001s4385 Capsella rubella HOM05D001435 ORTHO05D001304 5.1e-06 55.1 133 33.1
COL.COLO4_25013 Corchorus olitorius HOM05D001435 ORTHO05D001304 5.1e-06 55.1 38 63.2
Nn4g26653 Nelumbo nucifera HOM05D001435 ORTHO05D001304 5.1e-06 55.1 38 60.5
Sed0010726 Sechium edule HOM05D001435 ORTHO05D001304 5.1e-06 55.1 33 72.7
GSVIVG01033408001 Vitis vinifera HOM05D001435 ORTHO05D001304 5.1e-06 55.1 116 37.1
AL1G63390 Arabidopsis lyrata HOM05D001435 ORTHO05D001304 6.6e-06 54.7 133 33.1
AT1G55340 Arabidopsis thaliana HOM05D001435 ORTHO05D001304 6.6e-06 54.7 133 33.1
C06p15990 Brassica napus HOM05D001435 ORTHO05D001304 6.6e-06 54.7 66 45.5
FAN16G1601 Fragaria x ananassa HOM05D001435 ORTHO05D001304 6.6e-06 54.7 32 78.1
FAN25G1540 Fragaria x ananassa HOM05D001435 ORTHO05D001304 6.6e-06 54.7 32 78.1
Pp3c17_14270 Physcomitrium patens HOM05D001435 ORTHO05D001304 6.6e-06 54.7 59 45.8
Pp3c2_2700 Physcomitrium patens HOM05D001435 ORTHO05D001304 6.6e-06 54.7 58 44.8
RcHm_v2.0_Chr5g0083771 Rosa chinensis HOM05D001435 ORTHO05D001304 6.6e-06 54.7 32 78.1
Aqoxy1G00474 Aquilegia oxysepala HOM05D001435 ORTHO05D001304 8.7e-06 54.3 35 68.6
EL10Ac3g06826 Beta vulgaris HOM05D001435 ORTHO05D001304 8.7e-06 54.3 32 78.1
AUR62032702 Chenopodium quinoa HOM05D001435 ORTHO05D001304 8.7e-06 54.3 32 78.1
FAN16G2280 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.7e-06 54.3 96 37.5
MBI06_g30437_MAGBIO Magnolia biondii HOM05D001435 ORTHO05D001304 8.7e-06 54.3 108 32.4
Peaxi162Scf00463g00018 Petunia axillaris HOM05D001435 ORTHO05D001304 8.7e-06 54.3 32 75.0
Sed0018755 Sechium edule HOM05D001435 ORTHO05D001304 8.7e-06 54.3 90 38.9
THA.LOC104810326 Tarenaya hassleriana HOM05D001435 ORTHO05D001304 8.7e-06 54.3 131 32.1
Zm00001eb294400 Zea mays HOM05D001435 ORTHO05D001304 8.7e-06 54.3 58 51.7


User provided reference genes

Program Settings