Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04864 Sequoiadendron giganteum HOM05D003397 ORTHO05D004390 1.6e-106 389.4 195 100.0
SEGI_22371 Sequoiadendron giganteum HOM05D003397 ORTHO05D004390 4.9e-23 112.1 121 55.4
Mapoly0002s0049 Marchantia polymorpha HOM05D003397 ORTHO05D004390 7.9e-21 104.8 71 73.2
Phvul.009G028700 Phaseolus vulgaris HOM05D003397 ORTHO05D004390 7.9e-21 104.8 126 49.2
Lalb_Chr08g0241871 Lupinus albus HOM05D003397 ORTHO05D004390 1.3e-20 104.0 126 49.2
Medtr3g073860 Medicago truncatula HOM05D003397 ORTHO05D004390 1.3e-20 104.0 125 49.6
TPR.G34613 Trifolium pratense HOM05D003397 ORTHO05D004390 1.3e-20 104.0 125 49.6
CSS0020243 Camellia sinensis var. sinensis HOM05D003397 ORTHO05D004390 2.3e-20 103.2 125 49.6
CSS0020930 Camellia sinensis var. sinensis HOM05D003397 ORTHO05D004390 2.3e-20 103.2 125 49.6
Glyma.04G104900 Glycine max HOM05D003397 ORTHO05D004390 2.3e-20 103.2 125 49.6
Glyma.06G105900 Glycine max HOM05D003397 ORTHO05D004390 2.3e-20 103.2 125 49.6
Gohir.D01G183100 Gossypium hirsutum HOM05D003397 ORTHO05D004390 2.3e-20 103.2 60 81.7
Lalb_Chr11g0065541 Lupinus albus HOM05D003397 ORTHO05D004390 2.3e-20 103.2 136 47.1
PSO210G7545 Papaver somniferum HOM05D003397 ORTHO05D004390 2.3e-20 103.2 60 80.0
PSO447G0125 Papaver somniferum HOM05D003397 ORTHO05D004390 2.3e-20 103.2 60 80.0
VMungo1309G3072 Vigna mungo HOM05D003397 ORTHO05D004390 2.3e-20 103.2 125 49.6
Psat5g137080 Pisum sativum HOM05D003397 ORTHO05D004390 3.0e-20 102.8 125 48.8
arahy.Tifrunner.gnm1.ann1.L14VXE Arachis hypogaea HOM05D003397 ORTHO05D004390 3.9e-20 102.4 125 49.6
arahy.Tifrunner.gnm1.ann1.ZST20A Arachis hypogaea HOM05D003397 ORTHO05D004390 3.9e-20 102.4 125 49.6
Dinv44744 Davidia involucrata HOM05D003397 ORTHO05D004390 3.9e-20 102.4 136 47.8
AagrBONN_evm.TU.Sc2ySwM_228.4168 Anthoceros agrestis HOM05D003397 ORTHO05D004390 5.1e-20 102.1 63 76.2
Gohir.A01G186651 Gossypium hirsutum HOM05D003397 ORTHO05D004390 5.1e-20 102.1 125 49.6
Gorai.002G219400 Gossypium raimondii HOM05D003397 ORTHO05D004390 5.1e-20 102.1 125 49.6
Lj1g0005089 Lotus japonicus HOM05D003397 ORTHO05D004390 5.1e-20 102.1 125 48.8
TWI12G0718 Tripterygium wilfordii HOM05D003397 ORTHO05D004390 5.1e-20 102.1 71 69.0
Aqoxy5G01966 Aquilegia oxysepala HOM05D003397 ORTHO05D004390 6.7e-20 101.7 136 45.6
Ciclev10000007m.g Citrus clementina HOM05D003397 ORTHO05D004390 6.7e-20 101.7 125 48.0
FvH4_5g38000 Fragaria vesca HOM05D003397 ORTHO05D004390 6.7e-20 101.7 60 80.0
FAN04G2782 Fragaria x ananassa HOM05D003397 ORTHO05D004390 6.7e-20 101.7 60 80.0
FAN08G3668 Fragaria x ananassa HOM05D003397 ORTHO05D004390 6.7e-20 101.7 60 80.0
FAN13G2833 Fragaria x ananassa HOM05D003397 ORTHO05D004390 6.7e-20 101.7 60 80.0
FAN18G1561 Fragaria x ananassa HOM05D003397 ORTHO05D004390 6.7e-20 101.7 60 80.0
MD15G1363500 Malus domestica HOM05D003397 ORTHO05D004390 6.7e-20 101.7 60 80.0
Ah.05g168580 Amaranthus hybridus HOM05D003397 ORTHO05D004390 8.7e-20 101.3 71 69.0
Ca_15227_v3 Cicer arietinum L. HOM05D003397 ORTHO05D004390 8.7e-20 101.3 125 48.8
Thecc.08G111500 Theobroma cacao HOM05D003397 ORTHO05D004390 8.7e-20 101.3 125 49.6
COL.COLO4_16461 Corchorus olitorius HOM05D003397 ORTHO05D004390 1.1e-19 100.9 125 48.8
Eucgr.F00484 Eucalyptus grandis HOM05D003397 ORTHO05D004390 1.1e-19 100.9 125 48.8
TAR381G1558 Trochodendron aralioides HOM05D003397 ORTHO05D004390 1.1e-19 100.9 125 49.6
Atru.chr13.1263 Acer truncatum HOM05D003397 ORTHO05D004390 1.5e-19 100.5 136 46.3
Actinidia29577 Actinidia chinensis HOM05D003397 ORTHO05D004390 1.5e-19 100.5 125 48.0
Cfa015924 Carpinus fangiana HOM05D003397 ORTHO05D004390 1.5e-19 100.5 125 48.8
CiPaw.06G022200 Carya illinoinensis HOM05D003397 ORTHO05D004390 1.5e-19 100.5 125 48.8
ECA232G1190 Erigeron canadensis HOM05D003397 ORTHO05D004390 1.5e-19 100.5 136 45.6
Potri.002G092700 Populus trichocarpa HOM05D003397 ORTHO05D004390 1.5e-19 100.5 136 46.3
Prupe.1G512000 Prunus persica HOM05D003397 ORTHO05D004390 1.5e-19 100.5 60 78.3
QL12p035954 Quercus lobata HOM05D003397 ORTHO05D004390 1.5e-19 100.5 125 48.8
BraA06t23676Z Brassica rapa HOM05D003397 ORTHO05D004390 1.9e-19 100.1 71 67.6
CANSAT25G3899 Cannabis sativa HOM05D003397 ORTHO05D004390 1.9e-19 100.1 125 48.8
CiPaw.05G233000 Carya illinoinensis HOM05D003397 ORTHO05D004390 1.9e-19 100.1 125 48.0
HanXRQChr05g0147241 Helianthus annuus HOM05D003397 ORTHO05D004390 1.9e-19 100.1 125 48.8
Sc04g0006510 Simmondsia chinensis HOM05D003397 ORTHO05D004390 1.9e-19 100.1 125 48.0
Sc20g0003310 Simmondsia chinensis HOM05D003397 ORTHO05D004390 1.9e-19 100.1 125 48.0
Actinidia33155 Actinidia chinensis HOM05D003397 ORTHO05D004390 2.5e-19 99.8 60 78.3
A06p04730 Brassica napus HOM05D003397 ORTHO05D004390 2.5e-19 99.8 71 67.6
Carub.0001s3360 Capsella rubella HOM05D003397 ORTHO05D004390 2.5e-19 99.8 71 66.2
DCAR_013178 Daucus carota HOM05D003397 ORTHO05D004390 2.5e-19 99.8 125 48.0
Lsat_1_v5_gn_9_44420 Lactuca sativa HOM05D003397 ORTHO05D004390 2.5e-19 99.8 125 48.0
Lj4C108T3 Lonicera japonica HOM05D003397 ORTHO05D004390 2.5e-19 99.8 125 48.0
Peaxi162Scf00310g00211 Petunia axillaris HOM05D003397 ORTHO05D004390 2.5e-19 99.8 136 46.3
Pp3c4_17500 Physcomitrium patens HOM05D003397 ORTHO05D004390 2.5e-19 99.8 71 64.8
Rhsim07G0200500 Rhododendron simsii HOM05D003397 ORTHO05D004390 2.5e-19 99.8 125 48.0
TWI56G0794 Tripterygium wilfordii HOM05D003397 ORTHO05D004390 2.5e-19 99.8 136 44.9
vmacro04766 Vaccinium macrocarpon HOM05D003397 ORTHO05D004390 2.5e-19 99.8 125 48.0
AL1G50870 Arabidopsis lyrata HOM05D003397 ORTHO05D004390 3.3e-19 99.4 71 66.2
A08p07970 Brassica napus HOM05D003397 ORTHO05D004390 3.3e-19 99.4 60 78.3
BraA08t32819Z Brassica rapa HOM05D003397 ORTHO05D004390 3.3e-19 99.4 60 78.3
Haze_00572 Corylus avellana HOM05D003397 ORTHO05D004390 3.3e-19 99.4 125 48.0
Dinv13041 Davidia involucrata HOM05D003397 ORTHO05D004390 3.3e-19 99.4 125 48.0
HanXRQChr11g0320961 Helianthus annuus HOM05D003397 ORTHO05D004390 3.3e-19 99.4 60 78.3
GSVIVG01008991001 Vitis vinifera HOM05D003397 ORTHO05D004390 3.3e-19 99.4 125 47.2
ATR0564G238 Amborella trichopoda HOM05D003397 ORTHO05D004390 4.3e-19 99.0 125 47.2
MSTRG.944 Avicennia marina HOM05D003397 ORTHO05D004390 4.3e-19 99.0 136 45.6
BcaB04g17823 Brassica carinata HOM05D003397 ORTHO05D004390 4.3e-19 99.0 60 76.7
BcaC07g37499 Brassica carinata HOM05D003397 ORTHO05D004390 4.3e-19 99.0 60 76.7
BolC8t47818H Brassica oleracea HOM05D003397 ORTHO05D004390 4.3e-19 99.0 60 76.7
AT1G36160 Arabidopsis thaliana HOM05D003397 ORTHO05D004390 5.6e-19 98.6 71 64.8
Cc10_g05850 Coffea canephora HOM05D003397 ORTHO05D004390 5.6e-19 98.6 125 48.0
Duzib116G0371 Durio zibethinus HOM05D003397 ORTHO05D004390 5.6e-19 98.6 125 48.0
MBI02_g30884_MAGBIO Magnolia biondii HOM05D003397 ORTHO05D004390 5.6e-19 98.6 121 47.9
Sabra02G0073200 Salix brachista HOM05D003397 ORTHO05D004390 5.6e-19 98.6 125 47.2
EL10Ac1g01671 Beta vulgaris HOM05D003397 ORTHO05D004390 7.4e-19 98.2 60 76.7
MELO3C022793.2 Cucumis melo HOM05D003397 ORTHO05D004390 7.4e-19 98.2 125 46.4
MD08G1178000 Malus domestica HOM05D003397 ORTHO05D004390 7.4e-19 98.2 60 75.0
Manes.18G070300 Manihot esculenta HOM05D003397 ORTHO05D004390 7.4e-19 98.2 125 48.0
unitig_46.g18003 Utricularia gibba HOM05D003397 ORTHO05D004390 7.4e-19 98.2 121 47.9
CAN.G12.31 Capsicum annuum HOM05D003397 ORTHO05D004390 9.6e-19 97.8 136 45.6
CDE05G2113 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 9.6e-19 97.8 136 46.3
ClCG03G009000 Citrullus lanatus HOM05D003397 ORTHO05D004390 9.6e-19 97.8 125 46.4
CsaV3_5G023610 Cucumis sativus L. HOM05D003397 ORTHO05D004390 9.6e-19 97.8 125 46.4
Pp3c13_14480 Physcomitrium patens HOM05D003397 ORTHO05D004390 9.6e-19 97.8 71 64.8
BcaC08g43005 Brassica carinata HOM05D003397 ORTHO05D004390 1.3e-18 97.4 60 75.0
C06p02460 Brassica napus HOM05D003397 ORTHO05D004390 1.3e-18 97.4 60 75.0
CSS0006750 Camellia sinensis var. sinensis HOM05D003397 ORTHO05D004390 1.3e-18 97.4 125 48.8
Nitab4.5_0000421g0140 Nicotiana tabacum HOM05D003397 ORTHO05D004390 1.3e-18 97.4 136 45.6
Potri.005G169100 Populus trichocarpa HOM05D003397 ORTHO05D004390 1.3e-18 97.4 125 47.2
PGSC0003DMG400008551 Solanum tuberosum HOM05D003397 ORTHO05D004390 1.3e-18 97.4 136 45.6
AT1G36180 Arabidopsis thaliana HOM05D003397 ORTHO05D004390 1.6e-18 97.1 125 46.4
BcaB07g33794 Brassica carinata HOM05D003397 ORTHO05D004390 1.6e-18 97.1 60 75.0
Manes.02G155300 Manihot esculenta HOM05D003397 ORTHO05D004390 1.6e-18 97.1 125 48.0
Oeu024555.1 Olea europaea HOM05D003397 ORTHO05D004390 1.6e-18 97.1 125 47.2
Peaxi162Scf00030g01821 Petunia axillaris HOM05D003397 ORTHO05D004390 1.6e-18 97.1 71 69.0
Peaxi162Scf00160g01527 Petunia axillaris HOM05D003397 ORTHO05D004390 1.6e-18 97.1 136 45.6
Hund17528 Selenicereus undatus HOM05D003397 ORTHO05D004390 1.6e-18 97.1 125 45.6
Thhalv10003506m.g Eutrema salsugineum HOM05D003397 ORTHO05D004390 2.1e-18 96.7 60 73.3
Gohir.A05G268100 Gossypium hirsutum HOM05D003397 ORTHO05D004390 2.1e-18 96.7 125 47.2
Gohir.D05G269700 Gossypium hirsutum HOM05D003397 ORTHO05D004390 2.1e-18 96.7 125 47.2
Gorai.009G282300 Gossypium raimondii HOM05D003397 ORTHO05D004390 2.1e-18 96.7 125 47.2
Solyc12g056940.2 Solanum lycopersicum HOM05D003397 ORTHO05D004390 2.1e-18 96.7 136 45.6
Sopen12g029600 Solanum pennellii HOM05D003397 ORTHO05D004390 2.1e-18 96.7 136 45.6
TAR625G0333 Trochodendron aralioides HOM05D003397 ORTHO05D004390 2.1e-18 96.7 121 46.3
AL1G50880 Arabidopsis lyrata HOM05D003397 ORTHO05D004390 2.8e-18 96.3 125 45.6
BolC6t35373H Brassica oleracea HOM05D003397 ORTHO05D004390 2.8e-18 96.3 60 73.3
Nn1g05275 Nelumbo nucifera HOM05D003397 ORTHO05D004390 2.8e-18 96.3 125 45.6
Aa31LG6G8980 Aethionema arabicum HOM05D003397 ORTHO05D004390 3.7e-18 95.9 60 71.7
CANSAT11G0938 Cannabis sativa HOM05D003397 ORTHO05D004390 3.7e-18 95.9 125 45.6
Nitab4.5_0006548g0020 Nicotiana tabacum HOM05D003397 ORTHO05D004390 3.7e-18 95.9 136 44.9
ECA236G4037 Erigeron canadensis HOM05D003397 ORTHO05D004390 4.8e-18 95.5 125 46.4
Os10g0363300 Oryza sativa ssp. japonica HOM05D003397 ORTHO05D004390 4.8e-18 95.5 125 45.6
THA.LOC104813126 Tarenaya hassleriana HOM05D003397 ORTHO05D004390 4.8e-18 95.5 125 46.4
Carub.0001s3361 Capsella rubella HOM05D003397 ORTHO05D004390 6.2e-18 95.1 125 44.0
Gohir.A01G186501 Gossypium hirsutum HOM05D003397 ORTHO05D004390 6.2e-18 95.1 118 48.3
Sed0010592 Sechium edule HOM05D003397 ORTHO05D004390 6.2e-18 95.1 125 44.8
HPP92_027255 Vanilla planifolia HOM05D003397 ORTHO05D004390 6.2e-18 95.1 125 45.6
PGR042G1140 Punica granatum HOM05D003397 ORTHO05D004390 8.1e-18 94.7 121 45.5
RcHm_v2.0_Chr7g0239931 Rosa chinensis HOM05D003397 ORTHO05D004390 8.1e-18 94.7 125 45.6
Nn5g29020 Nelumbo nucifera HOM05D003397 ORTHO05D004390 1.1e-17 94.4 136 43.4
Zm00001eb223980 Zea mays HOM05D003397 ORTHO05D004390 1.1e-17 94.4 125 44.8
Psat4g123920 Pisum sativum HOM05D003397 ORTHO05D004390 1.4e-17 94.0 56 76.8
Cpa.g.sc66.90 Carica papaya HOM05D003397 ORTHO05D004390 1.8e-17 93.6 125 46.4
AUR62022354 Chenopodium quinoa HOM05D003397 ORTHO05D004390 1.8e-17 93.6 125 44.8
AUR62034355 Chenopodium quinoa HOM05D003397 ORTHO05D004390 1.8e-17 93.6 125 44.8
SGA_v2.0_scaffold201G41423 Striga asiatica HOM05D003397 ORTHO05D004390 1.8e-17 93.6 121 45.5
Migut.C00221 Erythranthe guttata HOM05D003397 ORTHO05D004390 2.4e-17 93.2 126 44.4
Psat4g213440 Pisum sativum HOM05D003397 ORTHO05D004390 1.2e-16 90.9 63 71.4
Zm00001eb086560 Zea mays HOM05D003397 ORTHO05D004390 2.6e-16 89.7 125 44.0
SMO336G0042 Selaginella moellendorffii HOM05D003397 ORTHO05D004390 3.4e-16 89.4 121 42.1
SMO347G0105 Selaginella moellendorffii HOM05D003397 ORTHO05D004390 5.8e-16 88.6 121 42.1
Zm00001eb419400 Zea mays HOM05D003397 ORTHO05D004390 5.8e-16 88.6 125 43.2
SHI09383 Sapria himalayana HOM05D003397 ORTHO05D004390 2.2e-15 86.7 123 44.7
Nitab4.5_0005253g0020 Nicotiana tabacum HOM05D003397 ORTHO05D004390 1.1e-14 84.3 113 47.8
CBR_g21136 Chara braunii HOM05D003397 ORTHO05D004390 5.5e-14 82.0 61 68.9
SEGI_04558 Sequoiadendron giganteum HOM05D000005 ORTHO05D011490 5.1e-12 75.5 52 76.9
CARHR283620 Cardamine hirsuta HOM05D003397 ORTHO05D004390 2.0e-08 63.5 36 77.8
MCO01G438 Micromonas commoda HOM05D003397 ORTHO05D004390 7.6e-08 61.6 51 54.9
PRCOL_00001984 Prasinoderma coloniale HOM05D003397 ORTHO05D004390 3.8e-07 59.3 46 60.9
Cre08.g373050 Chlamydomonas reinhardtii HOM05D003397 ORTHO05D004390 1.4e-06 57.4 49 53.1
Cfa022865 Carpinus fangiana HOM05D003397 ORTHO05D004390 2.5e-06 56.6 65 53.8


User provided reference genes

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