Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04769 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 4.1e-74 282.7 383 100.0
SEGI_24124 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 4.1e-74 282.7 383 98.2
SEGI_23391 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 1.9e-42 177.6 147 65.3
SEGI_11579 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 1.8e-24 117.9 86 72.1
CDE04G1129 Ceratophyllum demersum HOM05D001500 ORTHO05D000202 3.1e-13 80.5 147 35.4
PGR119G0914 Punica granatum HOM05D001500 ORTHO05D000202 2.6e-12 77.4 121 39.7
CDE04G1027 Ceratophyllum demersum HOM05D001015 ORTHO05D000881 7.7e-12 75.9 97 42.3
ECA246G1797 Erigeron canadensis HOM05D001500 ORTHO05D000202 1.0e-11 75.5 119 37.8
ATR0730G185 Amborella trichopoda HOM05D001500 ORTHO05D000202 8.5e-11 72.4 93 40.9
Eucgr.H02608 Eucalyptus grandis HOM05D001500 ORTHO05D000202 1.1e-10 72.0 115 41.7
Lj4g0006689 Lotus japonicus HOM05D001500 ORTHO05D000202 2.5e-10 70.9 123 35.0
Lj4g0022708 Lotus japonicus HOM05D001500 ORTHO05D000202 2.5e-10 70.9 123 35.0
MSTRG.11441 Avicennia marina HOM05D001500 ORTHO05D000202 3.2e-10 70.5 97 39.2
Glyma.18G138000 Glycine max HOM05D001500 ORTHO05D000202 5.5e-10 69.7 127 33.1
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 7.2e-10 69.3 97 40.2
TAR371G0689 Trochodendron aralioides HOM05D001500 ORTHO05D000202 7.2e-10 69.3 117 36.8
CSS0030328 Camellia sinensis var. sinensis HOM05D001500 ORTHO05D000202 9.4e-10 68.9 99 44.4
TAR371G0288 Trochodendron aralioides HOM05D001500 ORTHO05D000202 1.2e-09 68.6 117 36.8
DCAR_031103 Daucus carota HOM05D001500 ORTHO05D000202 1.6e-09 68.2 127 34.6
HanXRQChr16g0517251 Helianthus annuus HOM05D001500 ORTHO05D000202 2.7e-09 67.4 96 36.5
MSTRG.23123 Avicennia marina HOM05D001500 ORTHO05D000202 3.6e-09 67.0 98 40.8
Cfa019103 Carpinus fangiana HOM05D001500 ORTHO05D000202 3.6e-09 67.0 93 38.7
Lsat_1_v5_gn_8_156180 Lactuca sativa HOM05D001500 ORTHO05D000202 3.6e-09 67.0 112 35.7
Migut.I00023 Erythranthe guttata HOM05D001500 ORTHO05D000202 4.7e-09 66.6 120 36.7
CAN.G781.18 Capsicum annuum HOM05D001500 ORTHO05D000202 6.1e-09 66.2 99 41.4
Lsat_1_v5_gn_5_17121 Lactuca sativa HOM05D001500 ORTHO05D000202 6.1e-09 66.2 115 33.9
Oeu024686.1 Olea europaea HOM05D001500 ORTHO05D000202 6.1e-09 66.2 116 33.6
Hund25349 Selenicereus undatus HOM05D001500 ORTHO05D000202 6.1e-09 66.2 126 32.5
AUR62014042 Chenopodium quinoa HOM05D001500 ORTHO05D000202 7.9e-09 65.9 115 33.9
DCAR_016489 Daucus carota HOM05D001500 ORTHO05D000202 7.9e-09 65.9 100 39.0
Hma1.2p1_0701F.1_g205950 Hydrangea macrophylla HOM05D001500 ORTHO05D000202 7.9e-09 65.9 69 46.4
SHI27119 Sapria himalayana HOM05D001500 ORTHO05D000202 7.9e-09 65.9 129 34.1
vmacro19375 Vaccinium macrocarpon HOM05D001500 ORTHO05D000202 7.9e-09 65.9 107 36.4
Gohir.A03G096600 Gossypium hirsutum HOM05D001500 ORTHO05D000202 1.0e-08 65.5 102 40.2
Gohir.D02G117200 Gossypium hirsutum HOM05D001500 ORTHO05D000202 1.0e-08 65.5 121 38.8
Gorai.005G136300 Gossypium raimondii HOM05D001500 ORTHO05D000202 1.0e-08 65.5 121 38.8
HanXRQChr05g0155581 Helianthus annuus HOM05D001500 ORTHO05D000202 1.0e-08 65.5 97 37.1
QL10p011934 Quercus lobata HOM05D001500 ORTHO05D000202 1.4e-08 65.1 108 38.9
Ciclev10019363m.g Citrus clementina HOM05D001500 ORTHO05D000202 1.8e-08 64.7 103 36.9
Lj3A1053G43 Lonicera japonica HOM05D001500 ORTHO05D000202 1.8e-08 64.7 99 38.4
Medtr8g064560 Medicago truncatula HOM05D001500 ORTHO05D000202 1.8e-08 64.7 153 28.8
GSVIVG01007771001 Vitis vinifera HOM05D001500 ORTHO05D000202 1.8e-08 64.7 109 35.8
Aqoxy3G01014 Aquilegia oxysepala HOM05D001500 ORTHO05D000202 2.3e-08 64.3 101 40.6
SalBow5G1343 Salvia bowleyana HOM05D001500 ORTHO05D000202 2.3e-08 64.3 100 43.0
EL10Ac5g10762 Beta vulgaris HOM05D001500 ORTHO05D000202 3.0e-08 63.9 103 38.8
AUR62005380 Chenopodium quinoa HOM05D001500 ORTHO05D000202 3.0e-08 63.9 115 33.0
Haze_07500 Corylus avellana HOM05D001500 ORTHO05D000202 3.9e-08 63.5 92 38.0
MBI16_g32803_MAGBIO Magnolia biondii HOM05D001500 ORTHO05D000202 3.9e-08 63.5 126 33.3
PSO832G3913 Papaver somniferum HOM05D001500 ORTHO05D000202 3.9e-08 63.5 127 32.3
SGA_v2.0_scaffold8G04217 Striga asiatica HOM05D001500 ORTHO05D000202 3.9e-08 63.5 98 40.8
PSO063G1876 Papaver somniferum HOM05D001500 ORTHO05D000202 5.2e-08 63.2 127 32.3
Sed0010486 Sechium edule HOM05D001500 ORTHO05D000202 5.2e-08 63.2 128 33.6
SEGI_37487 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 5.2e-08 63.2 47 66.0
Ah.11g051690 Amaranthus hybridus HOM05D001500 ORTHO05D000202 6.7e-08 62.8 86 38.4
ClCG06G016930 Citrullus lanatus HOM05D001500 ORTHO05D000202 6.7e-08 62.8 116 33.6
Sed0009448 Sechium edule HOM05D001500 ORTHO05D000202 6.7e-08 62.8 96 39.6
Sopen05g001570 Solanum pennellii HOM05D001500 ORTHO05D000202 6.7e-08 62.8 146 30.1
Hund25347 Selenicereus undatus HOM05D001500 ORTHO05D000202 1.1e-07 62.0 119 36.1
Actinidia15048 Actinidia chinensis HOM05D001500 ORTHO05D000202 1.5e-07 61.6 118 35.6
CDE07G1676 Ceratophyllum demersum HOM05D001500 ORTHO05D000202 1.5e-07 61.6 118 33.9
Ciclev10030930m.g Citrus clementina HOM05D001500 ORTHO05D000202 1.5e-07 61.6 124 33.1
Dinv15294 Davidia involucrata HOM05D001500 ORTHO05D000202 1.5e-07 61.6 97 39.2
Eucgr.B03343 Eucalyptus grandis HOM05D001500 ORTHO05D000202 2.0e-07 61.2 129 37.2
Ah.02g129930 Amaranthus hybridus HOM05D001500 ORTHO05D000202 2.6e-07 60.8 160 28.8
Ah.11g051710 Amaranthus hybridus HOM05D001500 ORTHO05D000202 2.6e-07 60.8 75 40.0
CiPaw.05G151100 Carya illinoinensis HOM05D001500 ORTHO05D000202 2.6e-07 60.8 119 35.3
Ca_22723_v3 Cicer arietinum L. HOM05D001500 ORTHO05D000202 2.6e-07 60.8 109 32.1
Glyma.08G287500 Glycine max HOM05D001500 ORTHO05D000202 2.6e-07 60.8 117 36.8
HanXRQChr12g0371501 Helianthus annuus HOM05D001500 ORTHO05D000202 2.6e-07 60.8 115 33.0
Oeu003454.1 Olea europaea HOM05D001500 ORTHO05D000202 2.6e-07 60.8 99 34.3
Cfa009145 Carpinus fangiana HOM05D001500 ORTHO05D000202 3.3e-07 60.5 112 33.9
Haze_12179 Corylus avellana HOM05D001500 ORTHO05D000202 3.3e-07 60.5 139 30.2
Duzib205G0319 Durio zibethinus HOM05D001500 ORTHO05D000202 3.3e-07 60.5 131 32.1
Medtr8g064530 Medicago truncatula HOM05D001500 ORTHO05D000202 3.3e-07 60.5 111 34.2
Rhsim08G0171000 Rhododendron simsii HOM05D001500 ORTHO05D000202 3.3e-07 60.5 105 36.2
Solyc05g005560.4 Solanum lycopersicum HOM05D001500 ORTHO05D000202 3.3e-07 60.5 131 29.8
AL1G37510 Arabidopsis lyrata HOM05D001500 ORTHO05D000202 4.4e-07 60.1 138 31.9
DCAR_026127 Daucus carota HOM05D001500 ORTHO05D000202 4.4e-07 60.1 116 37.1
Cc11_g14690 Coffea canephora HOM05D001500 ORTHO05D000202 5.7e-07 59.7 97 37.1
Dinv20666 Davidia involucrata HOM05D001500 ORTHO05D000202 5.7e-07 59.7 71 42.3
Lj6C805G9 Lonicera japonica HOM05D001500 ORTHO05D000202 5.7e-07 59.7 97 36.1
Potri.012G079200 Populus trichocarpa HOM05D001500 ORTHO05D000202 5.7e-07 59.7 94 39.4
PGSC0003DMG400030995 Solanum tuberosum HOM05D001500 ORTHO05D000202 5.7e-07 59.7 149 28.2
HPP92_024713 Vanilla planifolia HOM05D001500 ORTHO05D000202 5.7e-07 59.7 122 35.2
CSS0015241 Camellia sinensis var. sinensis HOM05D001500 ORTHO05D000202 7.4e-07 59.3 97 41.2
CSS0039517 Camellia sinensis var. sinensis HOM05D001500 ORTHO05D000202 7.4e-07 59.3 97 41.2
Duzib084G0232 Durio zibethinus HOM05D001500 ORTHO05D000202 7.4e-07 59.3 118 36.4
ECA233G3016 Erigeron canadensis HOM05D001500 ORTHO05D000202 7.4e-07 59.3 95 37.9
QL03p061221 Quercus lobata HOM05D001500 ORTHO05D000202 7.4e-07 59.3 111 32.4
EL10Ac6g13674 Beta vulgaris HOM05D001500 ORTHO05D000202 9.7e-07 58.9 117 32.5
CANSAT01G1848 Cannabis sativa HOM05D001500 ORTHO05D000202 9.7e-07 58.9 141 29.8
Carub.0001s2327 Capsella rubella HOM05D001500 ORTHO05D000202 9.7e-07 58.9 127 31.5
CARHR024180 Cardamine hirsuta HOM05D001500 ORTHO05D000202 9.7e-07 58.9 128 32.8
MD13G1092000 Malus domestica HOM05D001500 ORTHO05D000202 9.7e-07 58.9 111 34.2
MD16G1092600 Malus domestica HOM05D001500 ORTHO05D000202 9.7e-07 58.9 99 36.4
Thecc.03G010400 Theobroma cacao HOM05D001500 ORTHO05D000202 9.7e-07 58.9 129 32.6
TWI36G0220 Tripterygium wilfordii HOM05D001500 ORTHO05D000202 9.7e-07 58.9 158 29.7
unitig_0.g1447 Utricularia gibba HOM05D001500 ORTHO05D000202 9.7e-07 58.9 107 36.4
CiPaw.11G027800 Carya illinoinensis HOM05D001500 ORTHO05D000202 1.3e-06 58.5 102 37.3
Eucgr.B00367 Eucalyptus grandis HOM05D001500 ORTHO05D000202 1.3e-06 58.5 170 31.2
RhsimUnG0247200 Rhododendron simsii HOM05D001500 ORTHO05D000202 1.3e-06 58.5 97 37.1
unitig_22.g6438 Utricularia gibba HOM05D001500 ORTHO05D000202 1.3e-06 58.5 140 32.9
unitig_23.g29666 Utricularia gibba HOM05D001500 ORTHO05D000202 1.3e-06 58.5 140 32.9
Actinidia13507 Actinidia chinensis HOM05D001500 ORTHO05D000202 1.7e-06 58.2 118 35.6
arahy.Tifrunner.gnm1.ann1.J77J84 Arachis hypogaea HOM05D001500 ORTHO05D000202 1.7e-06 58.2 105 41.0
Oeu054052.1 Olea europaea HOM05D001500 ORTHO05D000202 1.7e-06 58.2 99 32.3
Peaxi162Scf00017g00288 Petunia axillaris HOM05D001500 ORTHO05D000202 1.7e-06 58.2 102 36.3
Sc04g0001850 Simmondsia chinensis HOM05D001500 ORTHO05D000202 1.7e-06 58.2 97 37.1
TWI38G2246 Tripterygium wilfordii HOM05D001500 ORTHO05D000202 1.7e-06 58.2 118 33.1
Lj6C806T3 Lonicera japonica HOM05D001500 ORTHO05D000202 2.2e-06 57.8 103 36.9
Psat4g124000 Pisum sativum HOM05D001500 ORTHO05D000202 2.2e-06 57.8 94 33.0
Sabra15G0098500 Salix brachista HOM05D001500 ORTHO05D000202 2.2e-06 57.8 94 37.2
SGA_v2.0_scaffold165G38240 Striga asiatica HOM05D001500 ORTHO05D000202 2.2e-06 57.8 113 37.2
AT1G60390 Arabidopsis thaliana HOM05D001500 ORTHO05D000202 2.8e-06 57.4 118 32.2
AUR62008224 Chenopodium quinoa HOM05D001500 ORTHO05D000202 2.8e-06 57.4 103 35.0
Cc04_g13720 Coffea canephora HOM05D001500 ORTHO05D000202 2.8e-06 57.4 100 36.0
Nn4g22798 Nelumbo nucifera HOM05D001500 ORTHO05D000202 2.8e-06 57.4 123 31.7
Nitab4.5_0000203g0030 Nicotiana tabacum HOM05D001500 ORTHO05D000202 2.8e-06 57.4 119 35.3
Solyc05g005540.4 Solanum lycopersicum HOM05D001500 ORTHO05D000202 2.8e-06 57.4 154 27.9
PGSC0003DMG400030978 Solanum tuberosum HOM05D001500 ORTHO05D000202 2.8e-06 57.4 129 29.5
HPP92_009696 Vanilla planifolia HOM05D001500 ORTHO05D000202 2.8e-06 57.4 118 32.2
GSVIVG01013718001 Vitis vinifera HOM05D001500 ORTHO05D000202 2.8e-06 57.4 66 47.0
CSS0034455 Camellia sinensis var. sinensis HOM05D001500 ORTHO05D000202 3.7e-06 57.0 131 34.4
DCAR_026542 Daucus carota HOM05D001500 ORTHO05D000202 3.7e-06 57.0 123 35.0
arahy.Tifrunner.gnm1.ann1.CKB6LS Arachis hypogaea HOM05D001500 ORTHO05D000202 4.8e-06 56.6 102 39.2
COL.COLO4_04598 Corchorus olitorius HOM05D001500 ORTHO05D000202 4.8e-06 56.6 109 37.6
Nitab4.5_0005000g0010 Nicotiana tabacum HOM05D001500 ORTHO05D000202 4.8e-06 56.6 140 31.4
Sopen05g001560 Solanum pennellii HOM05D001500 ORTHO05D000202 4.8e-06 56.6 145 26.9
Atru.chr9.2452 Acer truncatum HOM05D001500 ORTHO05D000202 6.3e-06 56.2 100 36.0
Cpa.g.sc124.47 Carica papaya HOM05D001500 ORTHO05D000202 6.3e-06 56.2 65 44.6
RhsimUnG0247300 Rhododendron simsii HOM05D001500 ORTHO05D000202 6.3e-06 56.2 79 41.8
TWI75G1028 Tripterygium wilfordii HOM05D001500 ORTHO05D000202 6.3e-06 56.2 94 36.2
TAR622G0991 Trochodendron aralioides HOM05D001500 ORTHO05D000202 6.3e-06 56.2 112 33.9
CDE04G2955 Ceratophyllum demersum HOM05D001500 ORTHO05D000202 8.2e-06 55.8 75 41.3
Manes.12G028700 Manihot esculenta HOM05D001500 ORTHO05D000202 8.2e-06 55.8 120 34.2
Medtr8g064500 Medicago truncatula HOM05D001500 ORTHO05D000202 8.2e-06 55.8 76 39.5
Sc04g0009140 Simmondsia chinensis HOM05D001500 ORTHO05D000202 8.2e-06 55.8 114 32.5


User provided reference genes

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