Gene: Solyc05g005540.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g005540.4
- Transcript Identifier Solyc05g005540.4.1
- Gene Type Coding gene
- Location SL4.0ch05 : 426394-429075 : negative
Gene Family Information
- ID HOM05D001500
- #Genes/#Species 422/96
- Phylogenetic origin
- ID ORTHO05D000202
- #Genes/#Species 1406/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc05g005540.4.1
- uniprot A0A3Q7GD84
- gene_id Solyc05g005540
Descriptions
- Description Polygalacturonase-1 non-catalytic subunit beta (AHRD V3.3 *** GP1_SOLLC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042547 | ISO | PLAZA Integrative Orthology | cell wall modification involved in multidimensional cell growth | AT1G70370 |
| GO:0009827 | ISO | PLAZA Integrative Orthology | plant-type cell wall modification | AT1G70370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G70370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004873 | BURP domain |
| Mapman id | Description |
|---|---|
| 21.3.5.1.4 | Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.non-catalytic polygalacturonase regulator |