Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04425 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 3.3e-89 331.6 163 100.0
SEGI_34338 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 1.8e-50 203.0 120 85.8
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 2.4e-31 139.4 100 66.0
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 3.6e-27 125.6 100 56.0
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 3.6e-27 125.6 122 50.0
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 4.0e-26 122.1 103 55.3
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 2.6e-25 119.4 115 48.7
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 9.8e-25 117.5 100 55.0
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 9.8e-25 117.5 123 45.5
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.7e-24 116.7 118 46.6
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 2.8e-24 115.9 99 55.6
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 4.9e-24 115.2 127 46.5
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 4.9e-24 115.2 127 46.5
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 4.9e-24 115.2 100 55.0
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 6.3e-24 114.8 111 53.2
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 8.3e-24 114.4 113 51.3
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 1.8e-23 113.2 123 45.5
Cpa.g.sc75.31 Carica papaya HOM05D003776 ORTHO05D004459 4.1e-23 112.1 130 43.1
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 4.1e-23 112.1 104 51.9
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 5.4e-23 111.7 105 51.4
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 5.4e-23 111.7 107 51.4
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 9.2e-23 110.9 104 51.0
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 9.2e-23 110.9 131 45.0
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.2e-22 110.5 100 52.0
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 1.2e-22 110.5 104 51.0
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 2.0e-22 109.8 115 47.8
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 2.7e-22 109.4 97 53.6
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 2.7e-22 109.4 115 50.4
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 3.5e-22 109.0 123 43.1
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 3.5e-22 109.0 116 46.6
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 3.5e-22 109.0 114 45.6
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 4.5e-22 108.6 124 44.4
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 4.5e-22 108.6 124 46.0
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 5.9e-22 108.2 97 54.6
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 5.9e-22 108.2 123 44.7
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 5.9e-22 108.2 123 44.7
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 5.9e-22 108.2 100 51.0
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 5.9e-22 108.2 123 43.9
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 1.0e-21 107.5 105 49.5
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 1.3e-21 107.1 103 49.5
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 1.7e-21 106.7 124 44.4
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 1.7e-21 106.7 124 44.4
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 1.7e-21 106.7 124 44.4
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 1.7e-21 106.7 102 52.0
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 1.7e-21 106.7 100 49.0
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 2.3e-21 106.3 134 43.3
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 2.3e-21 106.3 158 38.6
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 2.3e-21 106.3 131 43.5
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 2.9e-21 105.9 105 47.6
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 2.9e-21 105.9 105 47.6
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 2.9e-21 105.9 123 43.9
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 2.9e-21 105.9 131 43.5
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 3.9e-21 105.5 123 43.9
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 3.9e-21 105.5 103 48.5
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 5.0e-21 105.1 100 50.0
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 6.6e-21 104.8 104 51.0
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 6.6e-21 104.8 103 47.6
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 8.6e-21 104.4 103 48.5
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 8.6e-21 104.4 99 47.5
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 1.1e-20 104.0 123 44.7
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 1.1e-20 104.0 123 43.1
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 1.1e-20 104.0 100 51.0
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 1.5e-20 103.6 130 42.3
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 1.5e-20 103.6 123 42.3
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 1.5e-20 103.6 97 51.5
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 1.9e-20 103.2 117 43.6
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 1.9e-20 103.2 117 42.7
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 1.9e-20 103.2 96 49.0
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 1.9e-20 103.2 121 43.0
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 2.5e-20 102.8 103 48.5
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 2.5e-20 102.8 103 48.5
Duzib187G1323 Durio zibethinus HOM05D003776 ORTHO05D004459 2.5e-20 102.8 119 43.7
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 2.5e-20 102.8 104 49.0
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 3.3e-20 102.4 105 48.6
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 7.3e-20 101.3 111 44.1
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 1.6e-19 100.1 114 43.9
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 2.1e-19 99.8 103 46.6
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 3.6e-19 99.0 103 46.6
Psat0s3979g0040 Pisum sativum HOM05D003776 ORTHO05D004459 4.7e-19 98.6 114 43.0
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 1.0e-18 97.4 97 49.5
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 1.0e-18 97.4 127 40.9
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 1.8e-18 96.7 102 47.1
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 2.3e-18 96.3 131 42.0
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 6.8e-18 94.7 128 40.6
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 4.4e-17 92.0 100 48.0
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 1.7e-16 90.1 100 47.0
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 1.7e-16 90.1 100 47.0
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 1.7e-16 90.1 127 38.6
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 1.7e-16 90.1 127 38.6
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 2.2e-16 89.7 127 38.6
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 2.2e-16 89.7 127 38.6
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.9e-16 89.4 127 39.4
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 4.1e-15 85.5 130 36.2
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 1.2e-14 84.0 150 34.0
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.5e-14 82.4 164 31.7
Ah.09g226230 Amaranthus hybridus HOM05D003776 ORTHO05D004459 2.3e-10 69.7 119 36.1
RcHm_v2.0_Chr2g0152361 Rosa chinensis HOM05D003776 ORTHO05D004459 3.1e-10 69.3 109 35.8
RcHm_v2.0_Chr2g0152391 Rosa chinensis HOM05D003776 ORTHO05D004459 3.1e-10 69.3 109 35.8
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 5.2e-10 68.6 73 49.3
Hma1.2p1_0018F.1_g012440 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 8.9e-10 67.8 63 52.4
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 2.6e-09 66.2 105 35.2
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 2.6e-09 66.2 69 47.8


User provided reference genes

Program Settings