Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.8e-179 631.7 299 100.0
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 7.4e-95 351.3 244 66.4
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 2.8e-94 349.4 243 63.0
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 1.1e-93 347.4 243 64.2
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 1.8e-93 346.7 243 64.6
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 3.1e-93 345.9 243 64.6
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 4.1e-93 345.5 243 63.8
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 5.3e-93 345.1 243 63.8
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 9.0e-93 344.4 243 63.4
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 2.6e-92 342.8 243 62.6
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 3.4e-92 342.4 243 62.1
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 4.5e-92 342.0 243 61.7
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 5.9e-92 341.7 243 62.6
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 7.7e-92 341.3 243 63.0
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 7.7e-92 341.3 246 61.8
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 1.3e-91 340.5 243 61.7
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 1.3e-91 340.5 245 63.3
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 2.9e-91 339.3 243 62.1
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 5.0e-91 338.6 243 63.0
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 6.5e-91 338.2 244 61.9
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 8.5e-91 337.8 243 62.1
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 1.4e-90 337.0 243 62.1
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 2.5e-90 336.3 243 60.1
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 2.5e-90 336.3 243 62.6
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 2.5e-90 336.3 244 62.3
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 2.5e-90 336.3 242 63.2
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 5.5e-90 335.1 243 61.3
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 5.5e-90 335.1 243 60.9
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 5.5e-90 335.1 243 63.4
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 5.5e-90 335.1 244 61.9
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 7.2e-90 334.7 243 61.3
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.1e-89 333.2 242 62.0
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 2.7e-89 332.8 263 57.8
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 3.6e-89 332.4 244 61.5
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 3.6e-89 332.4 246 62.2
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 6.1e-89 331.6 245 60.0
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 7.9e-89 331.3 243 61.7
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 7.9e-89 331.3 243 59.7
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 1.0e-88 330.9 242 60.7
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.4e-88 330.5 243 61.7
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 2.3e-88 329.7 245 60.8
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 2.3e-88 329.7 243 60.1
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 2.3e-88 329.7 264 58.3
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 2.3e-88 329.7 244 63.1
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 2.3e-88 329.7 243 60.9
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 3.0e-88 329.3 263 59.3
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.0e-88 329.3 243 62.1
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 3.0e-88 329.3 243 62.6
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 3.9e-88 328.9 245 59.6
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 3.9e-88 328.9 243 60.9
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 6.7e-88 328.2 245 58.0
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 6.7e-88 328.2 245 58.8
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 6.7e-88 328.2 263 56.7
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 8.8e-88 327.8 245 59.2
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 1.1e-87 327.4 243 60.9
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.5e-87 327.0 243 61.3
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.5e-87 327.0 243 58.4
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.5e-87 326.2 262 56.5
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 2.5e-87 326.2 245 60.8
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 5.7e-87 325.1 243 60.5
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 5.7e-87 325.1 245 58.0
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 5.7e-87 325.1 243 59.7
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 7.4e-87 324.7 244 58.6
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 7.4e-87 324.7 243 59.3
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 9.7e-87 324.3 244 61.1
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 1.3e-86 323.9 259 59.1
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 2.2e-86 323.2 244 60.7
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 2.2e-86 323.2 243 58.4
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 2.8e-86 322.8 242 59.9
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 3.7e-86 322.4 245 58.0
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 4.8e-86 322.0 243 59.3
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 4.8e-86 322.0 243 59.3
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 4.8e-86 322.0 243 58.8
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 6.3e-86 321.6 243 61.7
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 1.1e-85 320.9 263 56.7
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 1.4e-85 320.5 245 56.3
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 1.4e-85 320.5 243 59.7
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.8e-85 320.1 247 57.1
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 2.4e-85 319.7 247 57.1
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 3.1e-85 319.3 245 58.8
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 3.1e-85 319.3 244 58.6
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 4.1e-85 318.9 255 58.4
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 5.3e-85 318.5 242 58.7
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 6.9e-85 318.2 263 56.3
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 6.9e-85 318.2 243 60.5
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.2e-84 317.4 255 58.8
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 4.5e-84 315.5 247 55.9
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 4.5e-84 315.5 247 55.9
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.3e-83 313.9 273 54.9
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 1.3e-83 313.9 242 60.3
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 2.2e-83 313.2 243 58.0
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 6.5e-83 311.6 245 59.6
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 6.5e-83 311.6 262 55.0
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 1.1e-82 310.8 265 55.5
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 2.5e-82 309.7 243 57.2
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 1.5e-79 300.4 244 57.0
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 2.0e-79 300.1 230 57.4
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 8.2e-78 294.7 244 57.4
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.4e-77 293.9 250 55.6
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 2.2e-75 286.6 243 56.0
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 1.1e-74 284.3 256 55.5
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.5e-74 283.1 254 52.8
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 1.8e-69 266.9 183 65.6
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 1.6e-68 263.8 243 48.6
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 2.9e-67 259.6 251 47.0
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 6.5e-67 258.5 250 48.0
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 1.1e-66 257.7 180 63.3
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 8.0e-65 251.5 191 59.2
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 5.9e-60 235.3 267 43.8
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 7.7e-60 235.0 152 67.8
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 6.5e-59 231.9 151 67.5
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 6.5e-59 231.9 247 49.4
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 8.0e-57 224.9 152 66.4
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 8.3e-54 214.9 162 58.0
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 1.7e-38 164.1 142 53.5
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 3.2e-37 159.8 131 55.7
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 3.1e-32 143.3 95 69.5
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 2.6e-31 140.2 94 67.0
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 7.3e-18 95.5 301 28.2
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 2.8e-17 93.6 246 29.3
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 1.8e-16 90.9 63 65.1
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 2.7e-12 77.0 238 29.4
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.3e-11 74.7 231 26.4
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 1.6e-09 67.8 245 26.9
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 7.6e-07 58.9 39 61.5
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 7.6e-07 58.9 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 2.2e-06 57.4 65 46.2


User provided reference genes

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