Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04348 Sequoiadendron giganteum HOM05D004371 ORTHO05D002186 7.7e-52 206.8 102 100.0
SEGI_08538 Sequoiadendron giganteum HOM05D004371 ORTHO05D002186 1.1e-26 123.2 103 55.3
SEGI_26864 Sequoiadendron giganteum HOM05D004371 ORTHO05D002186 1.0e-24 116.7 96 59.4
SMO271G0134 Selaginella moellendorffii HOM05D004371 ORTHO05D002186 8.6e-11 70.5 109 42.2
Glyma.14G086600 Glycine max HOM05D004371 ORTHO05D002186 2.5e-10 68.9 80 41.2
Mapoly0043s0052 Marchantia polymorpha HOM05D004371 ORTHO05D002186 9.5e-10 67.0 94 39.4
PSO017G6350 Papaver somniferum HOM05D004371 ORTHO05D002186 9.5e-10 67.0 84 41.7
Carub.0007s1686 Capsella rubella HOM05D004371 ORTHO05D002186 1.2e-09 66.6 82 45.1
Glyma.17G237800 Glycine max HOM05D004371 ORTHO05D002186 1.2e-09 66.6 88 40.9
Sed0008652 Sechium edule HOM05D004371 ORTHO05D002186 1.2e-09 66.6 87 37.9
Gohir.D05G264800 Gossypium hirsutum HOM05D004371 ORTHO05D002186 1.6e-09 66.2 85 38.8
Gorai.009G276600 Gossypium raimondii HOM05D004371 ORTHO05D002186 1.6e-09 66.2 85 38.8
PSO170G2383 Papaver somniferum HOM05D004371 ORTHO05D002186 1.6e-09 66.2 77 45.5
Aa31LG7G10250 Aethionema arabicum HOM05D004371 ORTHO05D002186 2.1e-09 65.9 74 41.9
ATR0205G008 Amborella trichopoda HOM05D004371 ORTHO05D002186 2.8e-09 65.5 91 38.5
SEGI_31117 Sequoiadendron giganteum HOM05D004371 ORTHO05D002186 2.8e-09 65.5 85 40.0
Sabra14G0014700 Salix brachista HOM05D004371 ORTHO05D002186 3.6e-09 65.1 103 36.9
Thecc.08G095700 Theobroma cacao HOM05D004371 ORTHO05D002186 3.6e-09 65.1 86 38.4
CiPaw.16G035500 Carya illinoinensis HOM05D004371 ORTHO05D002186 4.7e-09 64.7 93 36.6
CDE07G1639 Ceratophyllum demersum HOM05D004371 ORTHO05D002186 4.7e-09 64.7 89 38.2
Potri.014G022100 Populus trichocarpa HOM05D004371 ORTHO05D002186 4.7e-09 64.7 93 38.7
Actinidia38086 Actinidia chinensis HOM05D004371 ORTHO05D002186 6.2e-09 64.3 97 37.1
Cfa004067 Carpinus fangiana HOM05D004371 ORTHO05D002186 6.2e-09 64.3 87 36.8
Haze_15343 Corylus avellana HOM05D004371 ORTHO05D002186 6.2e-09 64.3 87 36.8
Duzib093G1937 Durio zibethinus HOM05D004371 ORTHO05D002186 6.2e-09 64.3 87 37.9
Potri.002G122300 Populus trichocarpa HOM05D004371 ORTHO05D002186 6.2e-09 64.3 93 36.6
COL.COLO4_03644 Corchorus olitorius HOM05D004371 ORTHO05D002186 8.0e-09 63.9 86 37.2
HanXRQChr09g0267301 Helianthus annuus HOM05D004371 ORTHO05D002186 8.0e-09 63.9 102 37.3
Medtr3g102470 Medicago truncatula HOM05D004371 ORTHO05D002186 8.0e-09 63.9 92 40.2
SEGI_04440 Sequoiadendron giganteum HOM05D004371 ORTHO05D002186 8.0e-09 63.9 71 42.3
TWI09G1286 Tripterygium wilfordii HOM05D004371 ORTHO05D002186 8.0e-09 63.9 94 37.2
Dinv26873 Davidia involucrata HOM05D004371 ORTHO05D002186 1.1e-08 63.5 95 40.0
Manes.05G178400 Manihot esculenta HOM05D004371 ORTHO05D002186 1.1e-08 63.5 92 38.0
Lj4C65T11 Lonicera japonica HOM05D004371 ORTHO05D002186 1.4e-08 63.2 99 36.4
VMungo1383G3095 Vigna mungo HOM05D004371 ORTHO05D002186 1.4e-08 63.2 92 40.2
Lsat_1_v5_gn_6_109301 Lactuca sativa HOM05D004371 ORTHO05D002186 1.8e-08 62.8 108 32.4
Phvul.009G068500 Phaseolus vulgaris HOM05D004371 ORTHO05D002186 1.8e-08 62.8 92 38.0
Rhsim07G0223800 Rhododendron simsii HOM05D004371 ORTHO05D002186 1.8e-08 62.8 93 36.6
PGR083G0083 Punica granatum HOM05D004371 ORTHO05D002186 2.3e-08 62.4 96 35.4
Aqoxy6G02847 Aquilegia oxysepala HOM05D004371 ORTHO05D002186 3.1e-08 62.0 91 38.5
AL7G29060 Arabidopsis lyrata HOM05D004371 ORTHO05D002186 3.1e-08 62.0 74 40.5
AT4G24210 Arabidopsis thaliana HOM05D004371 ORTHO05D002186 3.1e-08 62.0 74 40.5
CiPaw.02G005700 Carya illinoinensis HOM05D004371 ORTHO05D002186 3.1e-08 62.0 83 42.2
Eucgr.F00160 Eucalyptus grandis HOM05D004371 ORTHO05D002186 4.0e-08 61.6 90 40.0
Lsat_1_v5_gn_4_129880 Lactuca sativa HOM05D004371 ORTHO05D002186 4.0e-08 61.6 108 33.3
Lj5g0006485 Lotus japonicus HOM05D004371 ORTHO05D002186 4.0e-08 61.6 93 40.9
RcHm_v2.0_Chr6g0308861 Rosa chinensis HOM05D004371 ORTHO05D002186 4.0e-08 61.6 101 32.7
Aqoxy5G01137 Aquilegia oxysepala HOM05D004371 ORTHO05D002186 5.2e-08 61.2 77 40.3
Cpa.g.sc21.140 Carica papaya HOM05D004371 ORTHO05D002186 5.2e-08 61.2 95 35.8
ClCG05G020280 Citrullus lanatus HOM05D004371 ORTHO05D002186 5.2e-08 61.2 96 34.4
BcaNung01127 Brassica carinata HOM05D004371 ORTHO05D002186 6.8e-08 60.8 74 43.2
Cpa.g.sc211.16 Carica papaya HOM05D004982 ORTHO05D002186 6.8e-08 60.8 99 38.4
ClCG08G016220 Citrullus lanatus HOM05D004371 ORTHO05D002186 6.8e-08 60.8 82 41.5
DCAR_012798 Daucus carota HOM05D004371 ORTHO05D002186 6.8e-08 60.8 100 33.0
Prupe.1G429300 Prunus persica HOM05D004371 ORTHO05D002186 6.8e-08 60.8 94 35.1
TPR.G25607 Trifolium pratense HOM05D004371 ORTHO05D002186 6.8e-08 60.8 97 37.1
CARHR231630 Cardamine hirsuta HOM05D004371 ORTHO05D002186 8.9e-08 60.5 74 40.5
Ca_15926_v3 Cicer arietinum L. HOM05D004371 ORTHO05D002186 8.9e-08 60.5 91 37.4
MELO3C010832.2 Cucumis melo HOM05D004371 ORTHO05D002186 8.9e-08 60.5 82 39.0
CsaV3_2G026400 Cucumis sativus L. HOM05D004371 ORTHO05D002186 8.9e-08 60.5 82 39.0
Duzib116G0411 Durio zibethinus HOM05D004371 ORTHO05D002186 8.9e-08 60.5 85 37.6
PSO349G0342 Papaver somniferum HOM05D004371 ORTHO05D002186 8.9e-08 60.5 88 36.4
SEGI_33552 Sequoiadendron giganteum HOM05D004371 ORTHO05D002186 8.9e-08 60.5 126 35.7
HPP92_004762 Vanilla planifolia HOM05D004371 ORTHO05D002186 8.9e-08 60.5 92 37.0
HPP92_027899 Vanilla planifolia HOM05D004371 ORTHO05D002186 8.9e-08 60.5 92 37.0
ATR1101G053 Amborella trichopoda HOM05D004371 ORTHO05D002186 1.2e-07 60.1 74 41.9
Gohir.A05G262600 Gossypium hirsutum HOM05D004371 ORTHO05D002186 1.2e-07 60.1 86 38.4
MD08G1091700 Malus domestica HOM05D004371 ORTHO05D002186 1.2e-07 60.1 102 33.3
Atru.chr13.769 Acer truncatum HOM05D004371 ORTHO05D002186 1.5e-07 59.7 82 40.2
CANSAT01G0966 Cannabis sativa HOM05D004371 ORTHO05D002186 2.0e-07 59.3 102 32.4
Sp7g22190 Schrenkiella parvula HOM05D004371 ORTHO05D002186 2.0e-07 59.3 74 41.9
Thhalv10026481m.g Eutrema salsugineum HOM05D004371 ORTHO05D002186 2.6e-07 58.9 81 40.7
Hma1.2p1_0240F.1_g100160 Hydrangea macrophylla HOM05D004371 ORTHO05D002186 2.6e-07 58.9 98 34.7
Psat5g040440 Pisum sativum HOM05D004371 ORTHO05D002186 2.6e-07 58.9 96 36.5
SHI08356 Sapria himalayana HOM05D004371 ORTHO05D002186 2.6e-07 58.9 112 34.8
Sc15g0005500 Simmondsia chinensis HOM05D004371 ORTHO05D002186 2.6e-07 58.9 85 35.3
Sc15g0005820 Simmondsia chinensis HOM05D004371 ORTHO05D002186 2.6e-07 58.9 85 35.3
TWI56G0459 Tripterygium wilfordii HOM05D004371 ORTHO05D002186 2.6e-07 58.9 96 34.4
BcaC09g50896 Brassica carinata HOM05D004371 ORTHO05D002186 3.4e-07 58.5 74 41.9
A01p15540 Brassica napus HOM05D004371 ORTHO05D002186 3.4e-07 58.5 74 41.9
C01p19460 Brassica napus HOM05D004371 ORTHO05D002186 3.4e-07 58.5 74 41.9
BolC1t01875H Brassica oleracea HOM05D004371 ORTHO05D002186 3.4e-07 58.5 74 41.9
BraA01t01493Z Brassica rapa HOM05D004371 ORTHO05D002186 3.4e-07 58.5 74 41.9
CiPaw.15G050400 Carya illinoinensis HOM05D004371 ORTHO05D002186 3.4e-07 58.5 97 33.0
CSS0047169 Camellia sinensis var. sinensis HOM05D004371 ORTHO05D002186 4.4e-07 58.2 102 35.3
Sc02g0007590 Simmondsia chinensis HOM05D004371 ORTHO05D002186 4.4e-07 58.2 90 37.8
Cfa018041 Carpinus fangiana HOM05D004371 ORTHO05D002186 5.8e-07 57.8 96 34.4
Haze_18084 Corylus avellana HOM05D004371 ORTHO05D002186 5.8e-07 57.8 96 34.4
MELO3C016791.2 Cucumis melo HOM05D004371 ORTHO05D002186 5.8e-07 57.8 105 31.4
ECA246G0242 Erigeron canadensis HOM05D004371 ORTHO05D002186 5.8e-07 57.8 108 32.4
PSO210G6412 Papaver somniferum HOM05D004371 ORTHO05D002186 5.8e-07 57.8 88 36.4
Actinidia08268 Actinidia chinensis HOM05D004371 ORTHO05D002186 7.5e-07 57.4 106 37.7
Ciclev10002417m.g Citrus clementina HOM05D004371 ORTHO05D002186 7.5e-07 57.4 86 39.5
Duzib041G0027 Durio zibethinus HOM05D004371 ORTHO05D002186 7.5e-07 57.4 90 36.7
Glyma.06G043400 Glycine max HOM05D004371 ORTHO05D002186 7.5e-07 57.4 97 35.1
HanXRQChr02g0038061 Helianthus annuus HOM05D004371 ORTHO05D002186 7.5e-07 57.4 109 31.2
Nn1g03222 Nelumbo nucifera HOM05D004982 ORTHO05D002186 7.5e-07 57.4 86 37.2
Nn5g31361 Nelumbo nucifera HOM05D004371 ORTHO05D002186 7.5e-07 57.4 100 34.0
Sed0018645 Sechium edule HOM05D004982 ORTHO05D002186 7.5e-07 57.4 75 42.7
Glyma.04G042900 Glycine max HOM05D004371 ORTHO05D002186 9.8e-07 57.0 97 35.1
Nn1g07475 Nelumbo nucifera HOM05D004982 ORTHO05D002186 9.8e-07 57.0 96 37.5
Oeu057260.2 Olea europaea HOM05D004371 ORTHO05D002186 9.8e-07 57.0 95 35.8
Zm00001eb183250 Zea mays HOM05D004371 ORTHO05D002186 9.8e-07 57.0 80 35.0
Dinv35916 Davidia involucrata HOM05D004371 ORTHO05D002186 1.3e-06 56.6 96 36.5
MD15G1075800 Malus domestica HOM05D004371 ORTHO05D002186 1.3e-06 56.6 104 32.7
Sed0011342 Sechium edule HOM05D004371 ORTHO05D002186 1.3e-06 56.6 107 30.8
CsaV3_4G034760 Cucumis sativus L. HOM05D004371 ORTHO05D002186 1.7e-06 56.2 104 30.8
HanXRQChr05g0150141 Helianthus annuus HOM05D004371 ORTHO05D002186 1.7e-06 56.2 106 32.1
Lsat_1_v5_gn_1_23100 Lactuca sativa HOM05D004371 ORTHO05D002186 1.7e-06 56.2 108 31.5
Lj8P134T70 Lonicera japonica HOM05D004982 ORTHO05D002186 1.7e-06 56.2 77 44.2
QL02p003441 Quercus lobata HOM05D004371 ORTHO05D002186 1.7e-06 56.2 110 31.8
Lalb_Chr11g0062751 Lupinus albus HOM05D004371 ORTHO05D002186 2.2e-06 55.8 99 35.4
unitig_748.g7786 Utricularia gibba HOM05D004371 ORTHO05D002186 2.2e-06 55.8 87 37.9
FAN20G0811 Fragaria x ananassa HOM05D004371 ORTHO05D002186 2.9e-06 55.5 100 30.0
TAR381G0906 Trochodendron aralioides HOM05D004371 ORTHO05D002186 2.9e-06 55.5 90 36.7
Lj1g0004679 Lotus japonicus HOM05D004371 ORTHO05D002186 3.7e-06 55.1 105 34.3
Manes.12G065100 Manihot esculenta HOM05D004982 ORTHO05D002186 3.7e-06 55.1 83 39.8
Oeu021393.1 Olea europaea HOM05D004371 ORTHO05D002186 3.7e-06 55.1 96 35.4
Potri.014G165700 Populus trichocarpa HOM05D004982 ORTHO05D002186 3.7e-06 55.1 84 41.7
Cc10_g05190 Coffea canephora HOM05D004371 ORTHO05D002186 4.9e-06 54.7 99 35.4
Phvul.008G284300 Phaseolus vulgaris HOM05D004982 ORTHO05D002186 4.9e-06 54.7 89 36.0
PGR042G3175 Punica granatum HOM05D004982 ORTHO05D002186 4.9e-06 54.7 79 40.5
TWI75G0082 Tripterygium wilfordii HOM05D004982 ORTHO05D002186 4.9e-06 54.7 79 44.3
FvH4_2g33690 Fragaria vesca HOM05D004371 ORTHO05D002186 6.4e-06 54.3 100 29.0
FAN24G0693 Fragaria x ananassa HOM05D004371 ORTHO05D002186 6.4e-06 54.3 100 29.0
Oeu029969.1 Olea europaea HOM05D004982 ORTHO05D002186 6.4e-06 54.3 73 42.5
VMungo0647G1787 Vigna mungo HOM05D004982 ORTHO05D002186 6.4e-06 54.3 89 36.0
Aqoxy4G02235 Aquilegia oxysepala HOM05D004982 ORTHO05D002186 8.3e-06 53.9 82 40.2
BcaB04g19561 Brassica carinata HOM05D004982 ORTHO05D002186 8.3e-06 53.9 83 37.3
A09p04340 Brassica napus HOM05D004982 ORTHO05D002186 8.3e-06 53.9 83 37.3
BolC9t53392H Brassica oleracea HOM05D004982 ORTHO05D002186 8.3e-06 53.9 83 37.3
BraA09t36071Z Brassica rapa HOM05D004982 ORTHO05D002186 8.3e-06 53.9 83 37.3
CAN.G1621.8 Capsicum annuum HOM05D004371 ORTHO05D002186 8.3e-06 53.9 101 38.6
Ciclev10016961m.g Citrus clementina HOM05D004982 ORTHO05D002186 8.3e-06 53.9 79 41.8
ECA247G1975 Erigeron canadensis HOM05D004371 ORTHO05D002186 8.3e-06 53.9 108 33.3
FAN15G2080 Fragaria x ananassa HOM05D004371 ORTHO05D002186 8.3e-06 53.9 102 30.4
Gohir.A07G191100 Gossypium hirsutum HOM05D004982 ORTHO05D002186 8.3e-06 53.9 84 41.7
PGSC0003DMG400003310 Solanum tuberosum HOM05D004371 ORTHO05D002186 8.3e-06 53.9 103 35.9


User provided reference genes

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