Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03932 Sequoiadendron giganteum HOM05D004854 ORTHO05D005854 2.6e-80 302.4 198 100.0
Migut.J00819 Erythranthe guttata HOM05D004854 ORTHO05D005854 1.1e-22 110.9 71 77.5
Sc26g0002890 Simmondsia chinensis HOM05D004854 ORTHO05D005854 2.5e-22 109.8 71 74.6
Sed0001835 Sechium edule HOM05D004854 ORTHO05D005854 9.4e-22 107.8 70 71.4
Hund26676 Selenicereus undatus HOM05D004854 ORTHO05D005854 1.6e-21 107.1 71 74.6
SGA_v2.0_scaffold21G09635 Striga asiatica HOM05D004854 ORTHO05D005854 1.6e-21 107.1 73 72.6
Sed0005886 Sechium edule HOM05D004854 ORTHO05D005854 2.1e-21 106.7 70 72.9
AUR62034880 Chenopodium quinoa HOM05D004854 ORTHO05D005854 3.6e-21 105.9 70 74.3
MELO3C003999.2 Cucumis melo HOM05D004854 ORTHO05D005854 3.6e-21 105.9 70 70.0
CAN.G86.2 Capsicum annuum HOM05D004854 ORTHO05D005854 6.1e-21 105.1 68 76.5
CsaV3_2G008580 Cucumis sativus L. HOM05D004854 ORTHO05D005854 8.0e-21 104.8 69 71.0
HanXRQChr10g0297881 Helianthus annuus HOM05D004854 ORTHO05D005854 8.0e-21 104.8 70 71.4
ClCG11G011930 Citrullus lanatus HOM05D004854 ORTHO05D005854 1.0e-20 104.4 70 70.0
Atru.chr12.1305 Acer truncatum HOM05D004854 ORTHO05D005854 1.4e-20 104.0 71 70.4
BraA02t05931Z Brassica rapa HOM05D004854 ORTHO05D005854 1.4e-20 104.0 70 70.0
AUR62026626 Chenopodium quinoa HOM05D004854 ORTHO05D005854 1.4e-20 104.0 70 72.9
Oeu000974.1 Olea europaea HOM05D004854 ORTHO05D005854 1.8e-20 103.6 71 69.0
Actinidia29956 Actinidia chinensis HOM05D004854 ORTHO05D005854 3.0e-20 102.8 71 69.0
MSTRG.19386 Avicennia marina HOM05D004854 ORTHO05D005854 3.0e-20 102.8 72 68.1
A02p08620 Brassica napus HOM05D004854 ORTHO05D005854 3.0e-20 102.8 69 71.0
MSTRG.26532 Avicennia marina HOM05D004854 ORTHO05D005854 4.0e-20 102.4 71 67.6
Ah.05g168230 Amaranthus hybridus HOM05D004854 ORTHO05D005854 5.2e-20 102.1 70 71.4
ECA247G3496 Erigeron canadensis HOM05D004854 ORTHO05D005854 5.2e-20 102.1 70 72.9
AL8G33260 Arabidopsis lyrata HOM05D004854 ORTHO05D005854 6.8e-20 101.7 70 68.6
BcaC03g14166 Brassica carinata HOM05D004854 ORTHO05D005854 6.8e-20 101.7 70 68.6
BcaC04g19981 Brassica carinata HOM05D004854 ORTHO05D005854 6.8e-20 101.7 70 68.6
BcaB05g22334 Brassica carinata HOM05D004854 ORTHO05D005854 8.8e-20 101.3 70 68.6
CANSAT11G1984 Cannabis sativa HOM05D004854 ORTHO05D005854 8.8e-20 101.3 69 69.6
Dinv25401 Davidia involucrata HOM05D004854 ORTHO05D005854 8.8e-20 101.3 69 71.0
arahy.Tifrunner.gnm1.ann1.9B8HPN Arachis hypogaea HOM05D004854 ORTHO05D005854 1.2e-19 100.9 70 67.1
arahy.Tifrunner.gnm1.ann1.P9UE85 Arachis hypogaea HOM05D004854 ORTHO05D005854 1.2e-19 100.9 70 67.1
Oeu064534.1 Olea europaea HOM05D004854 ORTHO05D005854 1.2e-19 100.9 70 71.4
QL11p004841 Quercus lobata HOM05D004854 ORTHO05D005854 1.5e-19 100.5 70 68.6
Ah.16g108570 Amaranthus hybridus HOM05D004854 ORTHO05D005854 2.0e-19 100.1 70 70.0
AT4G25890 Arabidopsis thaliana HOM05D004854 ORTHO05D005854 2.0e-19 100.1 70 65.7
PSO423G0276 Papaver somniferum HOM05D004854 ORTHO05D005854 2.0e-19 100.1 71 64.8
Ca_17781_v3 Cicer arietinum L. HOM05D004854 ORTHO05D005854 2.6e-19 99.8 71 66.2
Dinv26446 Davidia involucrata HOM05D004854 ORTHO05D005854 2.6e-19 99.8 68 70.6
Lsat_1_v5_gn_9_31040 Lactuca sativa HOM05D004854 ORTHO05D005854 2.6e-19 99.8 70 68.6
Nitab4.5_0000074g0010 Nicotiana tabacum HOM05D004854 ORTHO05D005854 2.6e-19 99.8 68 72.1
Nitab4.5_0012849g0010 Nicotiana tabacum HOM05D004854 ORTHO05D005854 2.6e-19 99.8 68 72.1
vmacro20836 Vaccinium macrocarpon HOM05D004854 ORTHO05D005854 2.6e-19 99.8 69 69.6
Carub.0008s1780 Capsella rubella HOM05D004854 ORTHO05D005854 3.4e-19 99.4 70 67.1
CDE05G0266 Ceratophyllum demersum HOM05D000177 ORTHO05D008165 3.4e-19 99.4 67 68.7
CDE05G2165 Ceratophyllum demersum HOM05D004854 ORTHO05D005854 3.4e-19 99.4 67 68.7
Solyc07g009330.4 Solanum lycopersicum HOM05D004854 ORTHO05D005854 4.4e-19 99.0 68 72.1
PGSC0003DMG400008513 Solanum tuberosum HOM05D004854 ORTHO05D005854 4.4e-19 99.0 68 72.1
AL7G27120 Arabidopsis lyrata HOM05D004854 ORTHO05D005854 5.7e-19 98.6 70 64.3
Thhalv10026301m.g Eutrema salsugineum HOM05D004854 ORTHO05D005854 5.7e-19 98.6 71 64.8
Glyma.05G174300 Glycine max HOM05D004854 ORTHO05D005854 5.7e-19 98.6 71 67.6
Sp6g19020 Schrenkiella parvula HOM05D004854 ORTHO05D005854 5.7e-19 98.6 70 67.1
Sp7g23910 Schrenkiella parvula HOM05D004854 ORTHO05D005854 7.5e-19 98.2 70 65.7
SGA_v2.0_scaffold41G15867 Striga asiatica HOM05D004854 ORTHO05D005854 7.5e-19 98.2 70 67.1
THA.LOC104811780 Tarenaya hassleriana HOM05D004854 ORTHO05D005854 7.5e-19 98.2 70 64.3
Thhalv10015037m.g Eutrema salsugineum HOM05D004854 ORTHO05D005854 9.8e-19 97.8 70 67.1
Phvul.002G259300 Phaseolus vulgaris HOM05D004854 ORTHO05D005854 9.8e-19 97.8 71 66.2
THA.LOC104813509 Tarenaya hassleriana HOM05D004854 ORTHO05D005854 9.8e-19 97.8 70 62.9
Cpa.g.sc95.32 Carica papaya HOM05D004854 ORTHO05D005854 1.3e-18 97.4 71 66.2
PSO596G0050 Papaver somniferum HOM05D004854 ORTHO05D005854 1.3e-18 97.4 71 63.4
Sopen07g005080 Solanum pennellii HOM05D004854 ORTHO05D005854 1.3e-18 97.4 68 70.6
arahy.Tifrunner.gnm1.ann1.P39ID1 Arachis hypogaea HOM05D004854 ORTHO05D005854 1.7e-18 97.1 71 63.4
CSS0022850 Camellia sinensis var. sinensis HOM05D004854 ORTHO05D005854 1.7e-18 97.1 67 70.1
Glyma.08G131500 Glycine max HOM05D004854 ORTHO05D005854 1.7e-18 97.1 71 66.2
Manes.06G021300 Manihot esculenta HOM05D004854 ORTHO05D005854 1.7e-18 97.1 69 71.0
SalBow5G3614 Salvia bowleyana HOM05D004854 ORTHO05D005854 1.7e-18 97.1 70 68.6
VMungo0251G0447 Vigna mungo HOM05D004854 ORTHO05D005854 1.7e-18 97.1 71 66.2
Aa31LG3G13170 Aethionema arabicum HOM05D004854 ORTHO05D005854 2.2e-18 96.7 70 67.1
Peaxi162Scf00324g00719 Petunia axillaris HOM05D004854 ORTHO05D005854 2.2e-18 96.7 68 69.1
Potri.009G032600 Populus trichocarpa HOM05D004854 ORTHO05D005854 2.2e-18 96.7 71 69.0
TWI38G2070 Tripterygium wilfordii HOM05D004854 ORTHO05D005854 2.2e-18 96.7 70 64.3
Oeu044701.1 Olea europaea HOM05D004854 ORTHO05D005854 2.8e-18 96.3 70 67.1
Potri.003G010200 Populus trichocarpa HOM05D004854 ORTHO05D005854 3.7e-18 95.9 71 67.6
Carub.0007s1506 Capsella rubella HOM05D004854 ORTHO05D005854 4.8e-18 95.5 71 63.4
MBI13_g31550_MAGBIO Magnolia biondii HOM05D004854 ORTHO05D005854 4.8e-18 95.5 68 66.2
TWI38G1790 Tripterygium wilfordii HOM05D004854 ORTHO05D005854 4.8e-18 95.5 71 64.8
C02p14390 Brassica napus HOM05D004854 ORTHO05D005854 6.3e-18 95.1 68 64.7
BolC2t07563H Brassica oleracea HOM05D004854 ORTHO05D005854 6.3e-18 95.1 68 64.7
BolC9t57762H Brassica oleracea HOM05D004854 ORTHO05D005854 6.3e-18 95.1 68 64.7
BraA10t43555Z Brassica rapa HOM05D004854 ORTHO05D005854 6.3e-18 95.1 68 64.7
CARHR233360 Cardamine hirsuta HOM05D004854 ORTHO05D005854 6.3e-18 95.1 71 63.4
arahy.Tifrunner.gnm1.ann1.90PU0B Arachis hypogaea HOM05D004854 ORTHO05D005854 8.3e-18 94.7 71 60.6
CARHR271090 Cardamine hirsuta HOM05D004854 ORTHO05D005854 8.3e-18 94.7 70 64.3
Ciclev10002863m.g Citrus clementina HOM05D004854 ORTHO05D005854 8.3e-18 94.7 72 65.3
DCAR_003035 Daucus carota HOM05D004854 ORTHO05D005854 8.3e-18 94.7 71 64.8
Psat7g058720 Pisum sativum HOM05D004854 ORTHO05D005854 8.3e-18 94.7 71 63.4
Prupe.1G079500 Prunus persica HOM05D004854 ORTHO05D005854 8.3e-18 94.7 70 64.3
TAR625G0051 Trochodendron aralioides HOM05D004854 ORTHO05D005854 1.1e-17 94.4 67 68.7
Zm00001eb226990 Zea mays HOM05D004854 ORTHO05D005854 1.1e-17 94.4 73 61.6
BcaB08g36089 Brassica carinata HOM05D004854 ORTHO05D005854 1.4e-17 94.0 71 64.8
CiPaw.08G034100 Carya illinoinensis HOM05D004854 ORTHO05D005854 1.4e-17 94.0 70 65.7
Dinv25400 Davidia involucrata HOM05D004854 ORTHO05D005854 1.4e-17 94.0 66 68.2
PGR044G2628 Punica granatum HOM05D004854 ORTHO05D005854 1.4e-17 94.0 68 67.6
PGR109G0004 Punica granatum HOM05D004854 ORTHO05D005854 1.4e-17 94.0 68 67.6
Rhsim01G0120500 Rhododendron simsii HOM05D004854 ORTHO05D005854 1.4e-17 94.0 67 67.2
C09p49130 Brassica napus HOM05D004854 ORTHO05D005854 1.8e-17 93.6 68 64.7
PGR142G3975 Punica granatum HOM05D004854 ORTHO05D005854 1.8e-17 93.6 71 64.8
Oeu044703.1 Olea europaea HOM05D004854 ORTHO05D005854 2.4e-17 93.2 68 66.2
Actinidia39348 Actinidia chinensis HOM05D000406 ORTHO05D003425 3.1e-17 92.8 67 67.2
A10p14720 Brassica napus HOM05D004854 ORTHO05D005854 3.1e-17 92.8 68 63.2
Medtr8g089790 Medicago truncatula HOM05D004854 ORTHO05D005854 3.1e-17 92.8 71 57.7
unitig_899.g15189 Utricularia gibba HOM05D004854 ORTHO05D005854 3.1e-17 92.8 70 64.3
GSVIVG01010910001 Vitis vinifera HOM05D004854 ORTHO05D005854 3.1e-17 92.8 67 68.7
MD13G1245200 Malus domestica HOM05D004854 ORTHO05D005854 4.1e-17 92.4 70 65.7
PSO596G0067 Papaver somniferum HOM05D004854 ORTHO05D005854 4.1e-17 92.4 71 62.0
TWI18G0069 Tripterygium wilfordii HOM05D004854 ORTHO05D005854 7.0e-17 91.7 69 62.3
AT5G57290 Arabidopsis thaliana HOM05D004854 ORTHO05D005854 9.1e-17 91.3 65 64.6
Os06g0701400 Oryza sativa ssp. japonica HOM05D004854 ORTHO05D005854 1.2e-16 90.9 73 61.6
Lalb_Chr07g0185421 Lupinus albus HOM05D004854 ORTHO05D005854 1.6e-16 90.5 69 63.8
MD16G1253100 Malus domestica HOM05D004854 ORTHO05D005854 1.6e-16 90.5 70 62.9
Gohir.A05G003400 Gossypium hirsutum HOM05D004854 ORTHO05D005854 2.0e-16 90.1 69 62.3
Gohir.D05G003800 Gossypium hirsutum HOM05D004854 ORTHO05D005854 2.0e-16 90.1 69 62.3
Gorai.009G003400 Gossypium raimondii HOM05D004854 ORTHO05D005854 2.0e-16 90.1 69 62.3
Lj4g0022898 Lotus japonicus HOM05D004854 ORTHO05D005854 2.0e-16 90.1 70 61.4
PSO423G0052 Papaver somniferum HOM05D004854 ORTHO05D005854 2.0e-16 90.1 71 60.6
Sabra03G0005200 Salix brachista HOM05D004854 ORTHO05D005854 2.0e-16 90.1 70 62.9
arahy.Tifrunner.gnm1.ann1.XNR1AK Arachis hypogaea HOM05D004854 ORTHO05D005854 2.7e-16 89.7 69 59.4
Duzib150G0904 Durio zibethinus HOM05D004854 ORTHO05D005854 2.7e-16 89.7 68 63.2
Eucgr.C02261 Eucalyptus grandis HOM05D004854 ORTHO05D005854 2.7e-16 89.7 67 65.7
Eucgr.C02263 Eucalyptus grandis HOM05D004854 ORTHO05D005854 2.7e-16 89.7 67 65.7
SGA_v2.0_scaffold46G17340 Striga asiatica HOM05D004854 ORTHO05D005854 2.7e-16 89.7 71 62.0
Cc06_g22110 Coffea canephora HOM05D004854 ORTHO05D005854 3.5e-16 89.4 68 63.2
Os01g0231700 Oryza sativa ssp. japonica HOM05D004854 ORTHO05D005854 3.5e-16 89.4 73 60.3
RcHm_v2.0_Chr4g0400241 Rosa chinensis HOM05D004854 ORTHO05D005854 3.5e-16 89.4 67 67.2
Cfa013427 Carpinus fangiana HOM05D004854 ORTHO05D005854 4.5e-16 89.0 67 61.2
FAN22G0664 Fragaria x ananassa HOM05D004854 ORTHO05D005854 4.5e-16 89.0 69 63.8
Lalb_Chr13g0295841 Lupinus albus HOM05D004854 ORTHO05D005854 4.5e-16 89.0 70 61.4
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 5.9e-16 88.6 66 65.2
arahy.Tifrunner.gnm1.ann1.AP25S4 Arachis hypogaea HOM05D004854 ORTHO05D005854 1.0e-15 87.8 69 58.0
FvH4_4g07630 Fragaria vesca HOM05D004854 ORTHO05D005854 1.0e-15 87.8 67 64.2
FAN07G2001 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.0e-15 87.8 67 64.2
FAN12G2445 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.0e-15 87.8 67 64.2
FAN17G2475 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.0e-15 87.8 67 64.2
Thecc.09G180300 Theobroma cacao HOM05D004854 ORTHO05D005854 1.0e-15 87.8 69 62.3
Eucgr.A01410 Eucalyptus grandis HOM05D004854 ORTHO05D005854 1.3e-15 87.4 67 64.2
TAR636G3485 Trochodendron aralioides HOM05D004854 ORTHO05D005854 1.3e-15 87.4 60 70.0
Sabra09G0023200 Salix brachista HOM05D004854 ORTHO05D005854 1.7e-15 87.0 68 64.7
TPR.G6298 Trifolium pratense HOM05D004854 ORTHO05D005854 3.8e-15 85.9 68 58.8
Pp3c22_2920 Physcomitrium patens HOM05D004854 ORTHO05D005854 6.5e-15 85.1 72 61.1
HPP92_026146 Vanilla planifolia HOM05D003573 ORTHO05D004204 6.5e-15 85.1 67 61.2
RcHm_v2.0_Chr1g0341131 Rosa chinensis HOM05D004854 ORTHO05D005854 8.5e-15 84.7 67 64.2
Migut.L01900 Erythranthe guttata HOM05D004854 ORTHO05D005854 1.9e-14 83.6 61 62.3
Lj6g0003516 Lotus japonicus HOM05D004854 ORTHO05D005854 1.9e-14 83.6 70 54.3
Zm00001eb272850 Zea mays HOM05D004854 ORTHO05D005854 2.5e-14 83.2 69 60.9
Pp3c21_16160 Physcomitrium patens HOM05D004854 ORTHO05D005854 4.2e-14 82.4 72 58.3
SMO172G0233 Selaginella moellendorffii HOM05D004854 ORTHO05D005854 4.2e-14 82.4 70 54.3
Thecc.01G294400 Theobroma cacao HOM05D004854 ORTHO05D005854 4.2e-14 82.4 73 54.8
arahy.Tifrunner.gnm1.ann1.63P7R9 Arachis hypogaea HOM05D000970 ORTHO05D000788 3.6e-13 79.3 53 71.7
SEGI_06602 Sequoiadendron giganteum HOM05D001808 ORTHO05D000007 3.6e-13 79.3 76 52.6
ATR0626G247 Amborella trichopoda HOM05D004854 ORTHO05D005854 1.4e-12 77.4 62 58.1
SEGI_40376 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.8e-12 77.0 56 64.3
Mapoly0006s0174 Marchantia polymorpha HOM05D004854 ORTHO05D005854 2.3e-12 76.6 72 51.4
C03p15060 Brassica napus HOM05D004854 ORTHO05D005854 2.0e-11 73.6 62 64.5
SEGI_15754 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 4.9e-10 68.9 80 45.0
Nn2g12744 Nelumbo nucifera HOM05D004854 ORTHO05D005854 2.4e-09 66.6 46 65.2
SEGI_19557 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 5.4e-09 65.5 70 51.4
SEGI_30722 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 5.4e-09 65.5 70 51.4
BolC3t13948H Brassica oleracea HOM05D004854 ORTHO05D005854 1.2e-08 64.3 60 58.3
COL.COLO4_25466 Corchorus olitorius HOM05D004854 ORTHO05D005854 1.2e-08 64.3 42 66.7
SEGI_01565 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.5e-08 62.8 68 47.1
SEGI_25042 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 4.5e-08 62.4 52 53.8
SEGI_17111 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.9e-08 62.0 49 59.2
SEGI_39525 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.9e-08 62.0 65 49.2
SEGI_23738 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.7e-07 60.5 72 43.1
Duzib170G0267 Durio zibethinus HOM05D004854 ORTHO05D005854 3.8e-07 59.3 42 61.9
SEGI_09276 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.8e-07 59.3 72 45.8
SEGI_15429 Sequoiadendron giganteum HOM05D000038 ORTHO05D000143 3.8e-07 59.3 69 46.4
SEGI_11408 Sequoiadendron giganteum HOM05D000153 ORTHO05D000118 6.6e-07 58.5 52 51.9
SEGI_27718 Sequoiadendron giganteum HOM05D003162 ORTHO05D003599 8.6e-07 58.2 62 54.8
SEGI_31014 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 8.6e-07 58.2 55 50.9
SEGI_25260 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.5e-06 56.6 70 41.4
Duzib168G1583 Durio zibethinus HOM05D004854 ORTHO05D005854 7.3e-06 55.1 45 53.3
SEGI_00518 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.3e-06 55.1 65 40.0
SEGI_25522 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.3e-06 55.1 65 40.0


User provided reference genes

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