Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03896 Sequoiadendron giganteum HOM05D001982 ORTHO05D003938 4.2e-116 421.4 217 100.0
CANSAT64G2347 Cannabis sativa HOM05D001982 ORTHO05D003938 3.4e-25 119.4 69 82.6
DCAR_002589 Daucus carota HOM05D001982 ORTHO05D003938 3.4e-25 119.4 69 82.6
Migut.N00791 Erythranthe guttata HOM05D001982 ORTHO05D003938 3.4e-25 119.4 69 82.6
Lj3A848T56 Lonicera japonica HOM05D001982 ORTHO05D003938 3.4e-25 119.4 69 82.6
Lj2g0016431 Lotus japonicus HOM05D001982 ORTHO05D003938 3.4e-25 119.4 69 82.6
unitig_747.g21790 Utricularia gibba HOM05D001982 ORTHO05D003938 4.5e-25 119.0 69 81.2
Oeu011121.2 Olea europaea HOM05D001982 ORTHO05D003938 5.9e-25 118.6 69 81.2
SGA_v2.0_scaffold2G01008 Striga asiatica HOM05D001982 ORTHO05D003938 5.9e-25 118.6 69 82.6
Hma1.2p1_0989F.1_g244810 Hydrangea macrophylla HOM05D001982 ORTHO05D003938 7.6e-25 118.2 69 81.2
Oeu030729.1 Olea europaea HOM05D001982 ORTHO05D003938 7.6e-25 118.2 69 82.6
Oeu059725.1 Olea europaea HOM05D001982 ORTHO05D003938 7.6e-25 118.2 69 81.2
SalBow6G6657 Salvia bowleyana HOM05D001982 ORTHO05D003938 7.6e-25 118.2 69 82.6
Aqoxy3G04305 Aquilegia oxysepala HOM05D001982 ORTHO05D003938 1.0e-24 117.9 69 81.2
Cfa017838 Carpinus fangiana HOM05D001982 ORTHO05D003938 1.0e-24 117.9 69 79.7
Ciclev10020931m.g Citrus clementina HOM05D001982 ORTHO05D003938 1.3e-24 117.5 69 79.7
Rhsim09G0070800 Rhododendron simsii HOM05D001982 ORTHO05D003938 1.3e-24 117.5 69 79.7
RcHm_v2.0_Chr7g0177081 Rosa chinensis HOM05D001982 ORTHO05D003938 1.3e-24 117.5 69 81.2
CSS0026731 Camellia sinensis var. sinensis HOM05D001982 ORTHO05D003938 1.7e-24 117.1 69 82.6
MBI03_g13817_MAGBIO Magnolia biondii HOM05D001982 ORTHO05D003938 1.7e-24 117.1 69 81.2
Manes.11G102600 Manihot esculenta HOM05D001982 ORTHO05D003938 1.7e-24 117.1 69 81.2
Psat1g121920 Pisum sativum HOM05D001982 ORTHO05D003938 1.7e-24 117.1 69 79.7
Haze_18370 Corylus avellana HOM05D001982 ORTHO05D003938 2.2e-24 116.7 69 79.7
MELO3C002167.2 Cucumis melo HOM05D001982 ORTHO05D003938 2.2e-24 116.7 69 81.2
CsaV3_1G007500 Cucumis sativus L. HOM05D001982 ORTHO05D003938 2.2e-24 116.7 69 81.2
Duzib132G0765 Durio zibethinus HOM05D001982 ORTHO05D003938 2.2e-24 116.7 69 81.2
ECA246G4989 Erigeron canadensis HOM05D001982 ORTHO05D007237 2.2e-24 116.7 69 81.2
Migut.F00794 Erythranthe guttata HOM05D001982 ORTHO05D003938 2.2e-24 116.7 69 79.7
CiPaw.16G072900 Carya illinoinensis HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 78.3
ClCG01G014830 Citrullus lanatus HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
DCAR_023463 Daucus carota HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 78.3
Dinv17623 Davidia involucrata HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
Duzib248G1602 Durio zibethinus HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
Lsat_1_v5_gn_3_36280 Lactuca sativa HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 81.2
Nn1g09877 Nelumbo nucifera HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
Phvul.004G139300 Phaseolus vulgaris HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
Sed0001556 Sechium edule HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
TAR371G1187 Trochodendron aralioides HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
TAR629G0467 Trochodendron aralioides HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
TAR629G3388 Trochodendron aralioides HOM05D001982 ORTHO05D003938 2.9e-24 116.3 69 79.7
Atru.chr9.96 Acer truncatum HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 79.7
MSTRG.298 Avicennia marina HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
MSTRG.8248 Avicennia marina HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
Glyma.16G213200 Glycine max HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
HanXRQChr06g0170891 Helianthus annuus HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 79.7
HanXRQChr17g0540971 Helianthus annuus HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 79.7
Lalb_Chr22g0353971 Lupinus albus HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
MD06G1239800 Malus domestica HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
Medtr6g077820 Medicago truncatula HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
Potri.015G028200 Populus trichocarpa HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
SGA_v2.0_scaffold221G42671 Striga asiatica HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 81.2
VMungo0464G0532 Vigna mungo HOM05D001982 ORTHO05D003938 3.8e-24 115.9 69 78.3
Manes.04G053480 Manihot esculenta HOM05D001982 ORTHO05D003938 5.0e-24 115.5 69 79.7
Peaxi162Scf00334g00321 Petunia axillaris HOM05D001982 ORTHO05D003938 5.0e-24 115.5 69 79.7
QL10p034220 Quercus lobata HOM05D001982 ORTHO05D003938 5.0e-24 115.5 69 79.7
Solyc02g005350.3 Solanum lycopersicum HOM05D001982 ORTHO05D003938 5.0e-24 115.5 69 79.7
Sopen02g001820 Solanum pennellii HOM05D001982 ORTHO05D003938 5.0e-24 115.5 69 79.7
Actinidia13716 Actinidia chinensis HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 78.3
Actinidia38418 Actinidia chinensis HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 78.3
CAN.G282.53 Capsicum annuum HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
CAN.G39.9 Capsicum annuum HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
CBR_g3058 Chara braunii HOM05D001982 ORTHO05D003938 6.5e-24 115.2 68 80.9
COL.COLO4_33052 Corchorus olitorius HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 78.3
MBI06_g20297_MAGBIO Magnolia biondii HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
Sed0019851 Sechium edule HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
Solyc01g007910.3 Solanum lycopersicum HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
Sopen01g003450 Solanum pennellii HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
PGSC0003DMG400016412 Solanum tuberosum HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
Thecc.02G158000 Theobroma cacao HOM05D001982 ORTHO05D003938 6.5e-24 115.2 69 79.7
DCAR_026892 Daucus carota HOM05D001982 ORTHO05D003938 8.5e-24 114.8 67 82.1
Gohir.A03G165300 Gossypium hirsutum HOM05D001982 ORTHO05D003938 8.5e-24 114.8 69 79.7
Gohir.D02G188500 Gossypium hirsutum HOM05D001982 ORTHO05D003938 8.5e-24 114.8 69 79.7
Gorai.005G211200 Gossypium raimondii HOM05D001982 ORTHO05D003938 8.5e-24 114.8 69 79.7
Lalb_Chr14g0370241 Lupinus albus HOM05D001982 ORTHO05D003938 8.5e-24 114.8 69 76.8
PSO063G1706 Papaver somniferum HOM05D001982 ORTHO05D003938 8.5e-24 114.8 69 79.7
PSO782G3517 Papaver somniferum HOM05D001982 ORTHO05D003938 8.5e-24 114.8 69 79.7
AUR62017711 Chenopodium quinoa HOM05D001982 ORTHO05D003938 1.1e-23 114.4 69 78.3
Ca_11833_v3 Cicer arietinum L. HOM05D001982 ORTHO05D003938 1.1e-23 114.4 69 78.3
Ciclev10032075m.g Citrus clementina HOM05D001982 ORTHO05D003938 1.1e-23 114.4 69 79.7
Cpa.g.sc0.121 Carica papaya HOM05D001982 ORTHO05D003938 1.4e-23 114.0 67 79.1
FvH4_5g18391 Fragaria vesca HOM05D001982 ORTHO05D003938 1.4e-23 114.0 69 78.3
FAN04G2680 Fragaria x ananassa HOM05D001982 ORTHO05D008035 1.4e-23 114.0 69 78.3
FAN08G1981 Fragaria x ananassa HOM05D001982 ORTHO05D008035 1.4e-23 114.0 69 78.3
FAN13G2347 Fragaria x ananassa HOM05D001982 ORTHO05D003938 1.4e-23 114.0 69 78.3
Nitab4.5_0000069g0360 Nicotiana tabacum HOM05D001982 ORTHO05D003938 1.4e-23 114.0 68 79.4
Nitab4.5_0004301g0040 Nicotiana tabacum HOM05D001982 ORTHO05D003938 1.4e-23 114.0 68 79.4
Os07g0577700 Oryza sativa ssp. japonica HOM05D001982 ORTHO05D003938 1.4e-23 114.0 68 79.4
Peaxi162Scf00021g01916 Petunia axillaris HOM05D001982 ORTHO05D003938 1.4e-23 114.0 68 79.4
Sabra05G0075300 Salix brachista HOM05D001982 ORTHO05D003938 1.4e-23 114.0 69 76.8
arahy.Tifrunner.gnm1.ann1.X8LG8D Arachis hypogaea HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 76.8
arahy.Tifrunner.gnm1.ann1.XQH9IF Arachis hypogaea HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 76.8
arahy.Tifrunner.gnm1.ann1.YRK7KB Arachis hypogaea HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 76.8
Duzib052G0243 Durio zibethinus HOM05D001982 ORTHO05D003938 1.9e-23 113.6 67 79.1
Eucgr.J00864 Eucalyptus grandis HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 78.3
Gohir.D13G060900 Gossypium hirsutum HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 78.3
Gorai.013G069200 Gossypium raimondii HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 78.3
Potri.012G036200 Populus trichocarpa HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 76.8
GSVIVG01029337001 Vitis vinifera HOM05D001982 ORTHO05D003938 1.9e-23 113.6 69 78.3
Mapoly0111s0054 Marchantia polymorpha HOM05D001982 ORTHO05D003938 2.5e-23 113.2 68 79.4
PSO384G4484 Papaver somniferum HOM05D001982 ORTHO05D003938 2.5e-23 113.2 94 63.8
Potri.005G091400 Populus trichocarpa HOM05D001982 ORTHO05D003938 2.5e-23 113.2 69 75.4
Sc06g0006770 Simmondsia chinensis HOM05D001982 ORTHO05D003938 2.5e-23 113.2 69 76.8
THA.LOC104818374 Tarenaya hassleriana HOM05D001982 ORTHO05D003938 2.5e-23 113.2 69 76.8
GSVIVG01026227001 Vitis vinifera HOM05D001982 ORTHO05D003938 2.5e-23 113.2 69 75.4
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 3.2e-23 112.8 67 80.6
MD14G1245700 Malus domestica HOM05D001982 ORTHO05D003938 3.2e-23 112.8 69 76.8
TWI81G0371 Tripterygium wilfordii HOM05D001982 ORTHO05D003938 3.2e-23 112.8 69 76.8
Zm00001eb107590 Zea mays HOM05D001982 ORTHO05D003938 3.2e-23 112.8 68 77.9
AUR62032970 Chenopodium quinoa HOM05D001982 ORTHO05D003938 4.2e-23 112.5 69 76.8
Glyma.09G164900 Glycine max HOM05D001982 ORTHO05D003938 4.2e-23 112.5 69 75.4
Hund24379 Selenicereus undatus HOM05D001982 ORTHO05D003938 4.2e-23 112.5 69 75.4
EL10Ac9g22963 Beta vulgaris HOM05D001982 ORTHO05D003938 5.5e-23 112.1 69 76.8
FAN18G1706 Fragaria x ananassa HOM05D001982 ORTHO05D008035 5.5e-23 112.1 69 76.8
Gohir.A13G060800 Gossypium hirsutum HOM05D001982 ORTHO05D003938 5.5e-23 112.1 69 78.3
TPR.G19874 Trifolium pratense HOM05D001982 ORTHO05D003938 5.5e-23 112.1 69 75.4
ATR0618G140 Amborella trichopoda HOM05D001982 ORTHO05D003938 7.2e-23 111.7 69 75.4
Cc11_g03450 Coffea canephora HOM05D001982 ORTHO05D003938 7.2e-23 111.7 68 76.5
PGR083G2378 Punica granatum HOM05D001982 ORTHO05D003938 9.3e-23 111.3 69 75.4
TWI15G0763 Tripterygium wilfordii HOM05D001982 ORTHO05D003938 9.3e-23 111.3 69 75.4
Pp3c10_7710 Physcomitrium patens HOM05D001982 ORTHO05D003938 1.2e-22 110.9 68 79.4
HPP92_020368 Vanilla planifolia HOM05D001982 ORTHO05D003938 1.2e-22 110.9 69 75.4
Pp3c14_8260 Physcomitrium patens HOM05D001982 ORTHO05D003938 1.6e-22 110.5 68 79.4
THA.LOC104819374 Tarenaya hassleriana HOM05D001982 ORTHO05D003938 1.6e-22 110.5 69 73.9
Aa31LG11G2700 Aethionema arabicum HOM05D001982 ORTHO05D003938 2.7e-22 109.8 69 73.9
A03p46310 Brassica napus HOM05D001982 ORTHO05D003938 2.7e-22 109.8 69 73.9
C07p44330 Brassica napus HOM05D001982 ORTHO05D003938 2.7e-22 109.8 69 73.9
BolC7t44954H Brassica oleracea HOM05D001982 ORTHO05D003938 2.7e-22 109.8 69 73.9
BraA03t13755Z Brassica rapa HOM05D001982 ORTHO05D003938 2.7e-22 109.8 69 73.9
Sp2g23900 Schrenkiella parvula HOM05D001982 ORTHO05D003938 2.7e-22 109.8 69 73.9
AL6G34470 Arabidopsis lyrata HOM05D001982 ORTHO05D003938 3.6e-22 109.4 69 73.9
Carub.0006s2102 Capsella rubella HOM05D001982 ORTHO05D003938 3.6e-22 109.4 69 73.9
CARHR190290 Cardamine hirsuta HOM05D001982 ORTHO05D003938 3.6e-22 109.4 69 73.9
Sabra12G0024700 Salix brachista HOM05D001982 ORTHO05D003938 4.6e-22 109.0 81 67.9
Hund08610 Selenicereus undatus HOM05D001982 ORTHO05D003938 4.6e-22 109.0 68 73.5
BcaC03g13215 Brassica carinata HOM05D001982 ORTHO05D003938 6.1e-22 108.6 69 72.5
Thhalv10013993m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 6.1e-22 108.6 69 72.5
Sp6g34660 Schrenkiella parvula HOM05D001982 ORTHO05D003938 6.1e-22 108.6 69 72.5
AT5G08300 Arabidopsis thaliana HOM05D001982 ORTHO05D003938 1.0e-21 107.8 69 72.5
C02p03480 Brassica napus HOM05D001982 ORTHO05D003938 1.0e-21 107.8 69 72.5
C09p68640 Brassica napus HOM05D001982 ORTHO05D003938 1.0e-21 107.8 69 72.5
BolC2t06309H Brassica oleracea HOM05D001982 ORTHO05D003938 1.0e-21 107.8 69 72.5
BolC9t59610H Brassica oleracea HOM05D001982 ORTHO05D003938 1.0e-21 107.8 69 72.5
BraA02t04948Z Brassica rapa HOM05D001982 ORTHO05D003938 1.0e-21 107.8 69 72.5
AL6G18700 Arabidopsis lyrata HOM05D001982 ORTHO05D003938 1.3e-21 107.5 69 72.5
A10p28380 Brassica napus HOM05D001982 ORTHO05D003938 1.3e-21 107.5 69 72.5
Carub.0006s0718 Capsella rubella HOM05D001982 ORTHO05D003938 1.3e-21 107.5 69 72.5
CARHR204830 Cardamine hirsuta HOM05D001982 ORTHO05D003938 1.8e-21 107.1 69 72.5
Thhalv10004347m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 2.3e-21 106.7 69 72.5
BcaB08g37266 Brassica carinata HOM05D001982 ORTHO05D003938 3.0e-21 106.3 69 71.0
A03p03740 Brassica napus HOM05D001982 ORTHO05D003938 3.0e-21 106.3 69 71.0
C03p04220 Brassica napus HOM05D001982 ORTHO05D003938 3.0e-21 106.3 69 71.0
BolC3t12954H Brassica oleracea HOM05D001982 ORTHO05D003938 3.0e-21 106.3 69 71.0
BraA03t09721Z Brassica rapa HOM05D001982 ORTHO05D003938 3.0e-21 106.3 69 71.0
BraA10t44885Z Brassica rapa HOM05D001982 ORTHO05D003938 3.0e-21 106.3 69 71.0
Eucgr.H00643 Eucalyptus grandis HOM05D001982 ORTHO05D003938 3.0e-21 106.3 66 75.8
BcaB01g05616 Brassica carinata HOM05D001982 ORTHO05D003938 8.7e-21 104.8 69 71.0
Cre03.g193850 Chlamydomonas reinhardtii HOM05D001982 ORTHO05D003938 1.9e-20 103.6 65 75.4
PSO170G1716 Papaver somniferum HOM05D001982 ORTHO05D003938 9.7e-20 101.3 83 65.1
MCO01G301 Micromonas commoda HOM05D001982 ORTHO05D003938 1.6e-19 100.5 68 69.1
Nitab4.5_0000661g0020 Nicotiana tabacum HOM05D001982 ORTHO05D003938 2.2e-19 100.1 69 72.5
Pp3c6_7570 Physcomitrium patens HOM05D001982 ORTHO05D003938 2.8e-19 99.8 68 67.6
CDE02G0698 Ceratophyllum demersum HOM05D001982 ORTHO05D003938 4.1e-18 95.9 71 69.0
PRCOL_00000620 Prasinoderma coloniale HOM05D001982 ORTHO05D003938 1.2e-17 94.4 69 68.1
CDE04G3537 Ceratophyllum demersum HOM05D001982 ORTHO05D003938 7.7e-17 91.7 82 62.2
Aa31LG3G18270 Aethionema arabicum HOM05D001982 ORTHO05D003938 1.4e-15 87.4 111 45.0
Haze_27086 Corylus avellana HOM05D001982 ORTHO05D003938 3.2e-15 86.3 60 66.7
Cfa024566 Carpinus fangiana HOM05D001982 ORTHO05D003938 7.9e-14 81.6 68 57.4
Haze_27382 Corylus avellana HOM05D001982 ORTHO05D003938 8.8e-13 78.2 62 56.5
Ca_28958_v3 Cicer arietinum L. HOM05D001982 ORTHO05D003938 6.3e-11 72.0 71 52.1
Lsat_1_v5_gn_6_100460 Lactuca sativa HOM05D001982 ORTHO05D003938 7.7e-09 65.1 54 61.1
vmacro16028 Vaccinium macrocarpon HOM05D001982 ORTHO05D003938 3.8e-08 62.8 39 76.9
vmacro16027 Vaccinium macrocarpon HOM05D001982 ORTHO05D003938 1.4e-07 60.8 32 81.2
Dinv11727 Davidia involucrata HOM05D001982 ORTHO05D003938 2.5e-07 60.1 32 81.2
Lj1g0018388 Lotus japonicus HOM05D001982 ORTHO05D003938 7.2e-07 58.5 30 83.3
AT5G23250 Arabidopsis thaliana HOM05D001982 ORTHO05D003938 3.6e-06 56.2 30 76.7


User provided reference genes

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