Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03313 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 3.9e-125 451.4 220 100.0
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 3.2e-39 166.0 216 44.0
Hma1.2p1_0235F.1_g098570 Hydrangea macrophylla HOM05D003492 ORTHO05D005115 7.5e-36 154.8 213 39.4
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 7.5e-36 154.8 215 40.9
TAR623G0911 Trochodendron aralioides HOM05D003492 ORTHO05D005115 2.8e-35 152.9 218 41.3
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 8.3e-35 151.4 217 40.1
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 3.5e-33 146.0 216 39.8
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 5.9e-33 145.2 208 40.4
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 7.7e-33 144.8 207 38.6
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.7e-32 143.7 212 38.7
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 2.2e-32 143.3 213 40.4
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 6.5e-32 141.7 225 38.7
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 8.5e-32 141.4 217 37.8
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.1e-31 141.0 207 37.7
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 1.5e-31 140.6 211 37.0
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 1.9e-31 140.2 214 37.9
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 1.9e-31 140.2 214 38.8
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 3.2e-31 139.4 210 39.0
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 7.2e-31 138.3 209 39.7
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 9.5e-31 137.9 213 37.6
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 9.5e-31 137.9 216 39.8
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 1.6e-30 137.1 209 39.7
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 1.6e-30 137.1 210 38.6
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 2.1e-30 136.7 212 36.3
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 2.1e-30 136.7 211 38.4
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 2.8e-30 136.3 211 37.0
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 2.8e-30 136.3 213 38.5
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 2.8e-30 136.3 213 38.5
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 4.7e-30 135.6 221 36.7
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 8.0e-30 134.8 217 35.9
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 8.0e-30 134.8 214 36.0
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.0e-29 134.4 212 37.7
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 1.4e-29 134.0 208 38.9
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.4e-29 134.0 209 38.3
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 1.4e-29 134.0 224 35.7
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 1.8e-29 133.7 210 37.6
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 2.3e-29 133.3 214 36.0
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 3.0e-29 132.9 212 35.4
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 4.0e-29 132.5 211 38.4
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 5.2e-29 132.1 214 37.4
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 5.2e-29 132.1 208 36.1
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 6.8e-29 131.7 215 37.2
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 8.8e-29 131.3 208 39.4
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 2.6e-28 129.8 206 38.3
Ca_30996_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 2.6e-28 129.8 206 38.3
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 2.6e-28 129.8 216 37.0
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 4.4e-28 129.0 208 38.5
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 5.7e-28 128.6 209 35.9
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 7.5e-28 128.3 214 36.4
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 7.5e-28 128.3 211 37.0
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 7.5e-28 128.3 211 37.0
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.3e-27 127.5 204 36.8
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.7e-27 127.1 216 38.9
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 3.7e-27 125.9 216 37.5
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 3.7e-27 125.9 208 36.1
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 6.3e-27 125.2 215 36.7
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 6.3e-27 125.2 215 36.7
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 6.3e-27 125.2 224 35.3
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 6.3e-27 125.2 204 36.8
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 8.3e-27 124.8 215 37.7
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.4e-26 124.0 209 35.4
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 1.8e-26 123.6 211 35.1
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 1.8e-26 123.6 212 36.8
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.4e-26 123.2 208 34.6
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.4e-26 123.2 204 34.8
Hund28567 Selenicereus undatus HOM05D003492 ORTHO05D005115 2.4e-26 123.2 214 35.0
Hund29345 Selenicereus undatus HOM05D003492 ORTHO05D005115 2.4e-26 123.2 214 35.0
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 3.1e-26 122.9 216 35.2
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 5.4e-26 122.1 207 36.7
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 7.0e-26 121.7 218 35.3
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 7.0e-26 121.7 209 34.9
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 9.2e-26 121.3 206 35.4
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 9.2e-26 121.3 208 36.1
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 1.6e-25 120.6 211 35.5
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.6e-25 120.6 210 37.6
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.0e-25 120.2 208 34.1
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 2.0e-25 120.2 211 33.2
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 2.0e-25 120.2 211 33.6
Nitab4.5_0011089g0020 Nicotiana tabacum HOM05D003492 ORTHO05D005115 2.0e-25 120.2 207 36.2
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 2.0e-25 120.2 189 37.6
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 2.0e-25 120.2 204 34.8
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 2.7e-25 119.8 197 37.1
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 3.5e-25 119.4 206 35.0
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 1.0e-24 117.9 214 35.0
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.3e-24 117.5 214 36.9
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 1.3e-24 117.5 211 33.2
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.3e-24 117.5 198 35.9
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 2.3e-24 116.7 213 37.6
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.9e-24 116.3 213 37.6
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 6.6e-24 115.2 214 36.4
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.1e-23 114.4 204 33.8
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.3e-23 112.8 212 36.8
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 5.6e-23 112.1 211 33.2
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 7.3e-23 111.7 203 32.5
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.6e-22 110.5 217 32.7
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.3e-21 106.7 209 34.4
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 1.5e-20 104.0 223 32.3
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 3.5e-17 92.8 210 32.9
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 6.6e-16 88.6 112 40.2
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 1.1e-15 87.8 211 28.0
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 1.5e-12 77.4 89 38.2
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 3.4e-12 76.3 173 34.1
HPP92_012036 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.9e-10 70.5 126 35.7
SHI03336 Sapria himalayana HOM05D003492 ORTHO05D005115 3.2e-10 69.7 163 31.3
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 4.6e-09 65.9 79 38.0
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 4.6e-09 65.9 237 25.7
Lj8A65T41 Lonicera japonica HOM05D003492 ORTHO05D005115 1.2e-06 57.8 76 32.9
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 2.8e-06 56.6 81 32.1


User provided reference genes

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