Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02841 Sequoiadendron giganteum HOM05D001900 ORTHO05D009822 2.3e-57 225.3 111 100.0
VMungo1309G1285 Vigna mungo HOM05D001900 ORTHO05D009822 3.7e-15 85.1 103 43.7
Phvul.009G118000 Phaseolus vulgaris HOM05D001900 ORTHO05D009822 4.8e-15 84.7 103 42.7
Lj1g0008985 Lotus japonicus HOM05D001900 ORTHO05D009822 6.3e-15 84.3 104 46.2
COL.COLO4_33974 Corchorus olitorius HOM05D001900 ORTHO05D009822 2.4e-14 82.4 112 42.9
SEGI_32418 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 2.4e-14 82.4 53 77.4
Glyma.06G002200 Glycine max HOM05D001900 ORTHO05D009822 1.2e-13 80.1 103 39.8
Thecc.03G317800 Theobroma cacao HOM05D001900 ORTHO05D009822 1.2e-13 80.1 105 40.0
Cpa.g.sc33.201 Carica papaya HOM05D001900 ORTHO05D009822 2.6e-13 79.0 108 37.0
Medtr3g118160 Medicago truncatula HOM05D001900 ORTHO05D009822 3.4e-13 78.6 91 41.8
Sed0002012 Sechium edule HOM05D001900 ORTHO05D009822 3.4e-13 78.6 102 40.2
Duzib093G0448 Durio zibethinus HOM05D001900 ORTHO05D009822 5.9e-13 77.8 110 39.1
Duzib068G0353 Durio zibethinus HOM05D001900 ORTHO05D009822 1.0e-12 77.0 110 38.2
Lj9A612G46 Lonicera japonica HOM05D001900 ORTHO05D009822 1.0e-12 77.0 103 39.8
PSO782G0855 Papaver somniferum HOM05D001900 ORTHO05D009822 1.3e-12 76.6 93 39.8
TPR.G38535 Trifolium pratense HOM05D001900 ORTHO05D009822 1.3e-12 76.6 90 41.1
Psat5g001640 Pisum sativum HOM05D001900 ORTHO05D009822 2.2e-12 75.9 91 40.7
TAR629G0128 Trochodendron aralioides HOM05D001900 ORTHO05D009822 2.9e-12 75.5 108 36.1
DCAR_025009 Daucus carota HOM05D001900 ORTHO05D009822 3.8e-12 75.1 101 40.6
Lj7A558G40 Lonicera japonica HOM05D001900 ORTHO05D009822 3.8e-12 75.1 103 38.8
TWI59G1258 Tripterygium wilfordii HOM05D001900 ORTHO05D009822 3.8e-12 75.1 103 37.9
Manes.09G009000 Manihot esculenta HOM05D001900 ORTHO05D009822 5.0e-12 74.7 103 38.8
Gohir.A01G199100 Gossypium hirsutum HOM05D001900 ORTHO05D009822 6.5e-12 74.3 91 46.2
Gorai.002G232800 Gossypium raimondii HOM05D001900 ORTHO05D009822 6.5e-12 74.3 87 46.0
MD02G1230000 Malus domestica HOM05D001900 ORTHO05D009822 8.5e-12 73.9 93 40.9
Lj9C614G16 Lonicera japonica HOM05D001900 ORTHO05D009822 1.1e-11 73.6 91 41.8
TWI23G0622 Tripterygium wilfordii HOM05D001900 ORTHO05D009822 1.1e-11 73.6 85 44.7
Ca_15288_v3 Cicer arietinum L. HOM05D001900 ORTHO05D009822 1.4e-11 73.2 91 40.7
Aqoxy3G02315 Aquilegia oxysepala HOM05D001900 ORTHO05D009822 2.5e-11 72.4 87 43.7
Gohir.D01G189200 Gossypium hirsutum HOM05D001900 ORTHO05D009822 2.5e-11 72.4 87 46.0
PGR083G1425 Punica granatum HOM05D001900 ORTHO05D009822 5.5e-11 71.2 108 34.3
FAN03G2269 Fragaria x ananassa HOM05D001900 ORTHO05D009822 9.4e-11 70.5 104 37.5
MBI04_g33884_MAGBIO Magnolia biondii HOM05D001900 ORTHO05D009822 9.4e-11 70.5 106 37.7
Prupe.2G108000 Prunus persica HOM05D001900 ORTHO05D009822 9.4e-11 70.5 88 42.0
ECA236G3998 Erigeron canadensis HOM05D001900 ORTHO05D009822 2.7e-10 68.9 101 37.6
Atru.chr5.3 Acer truncatum HOM05D001900 ORTHO05D009822 3.6e-10 68.6 103 37.9
Os10g0574500 Oryza sativa ssp. japonica HOM05D001900 ORTHO05D009822 3.6e-10 68.6 88 36.4
PSO478G0714 Papaver somniferum HOM05D001900 ORTHO05D009822 3.6e-10 68.6 85 40.0
SalBow5G2409 Salvia bowleyana HOM05D001900 ORTHO05D009822 3.6e-10 68.6 118 36.4
ClCG05G002630 Citrullus lanatus HOM05D001900 ORTHO05D009822 6.1e-10 67.8 104 35.6
Ciclev10024044m.g Citrus clementina HOM05D001900 ORTHO05D009822 6.1e-10 67.8 90 43.3
Oeu060679.1 Olea europaea HOM05D001900 ORTHO05D009822 6.1e-10 67.8 82 42.7
Nitab4.5_0000592g0310 Nicotiana tabacum HOM05D001900 ORTHO05D009822 7.9e-10 67.4 101 36.6
Solyc01g081080.3 Solanum lycopersicum HOM05D001900 ORTHO05D009822 7.9e-10 67.4 102 38.2
Sopen01g032700 Solanum pennellii HOM05D001900 ORTHO05D009822 7.9e-10 67.4 102 38.2
Dinv43536 Davidia involucrata HOM05D001900 ORTHO05D009822 1.0e-09 67.0 87 42.5
Migut.I00453 Erythranthe guttata HOM05D001900 ORTHO05D009822 1.0e-09 67.0 85 41.2
FvH4_7g08091 Fragaria vesca HOM05D001900 ORTHO05D009822 1.0e-09 67.0 92 40.2
FAN01G1173 Fragaria x ananassa HOM05D001900 ORTHO05D009822 1.0e-09 67.0 92 40.2
MELO3C006229.2 Cucumis melo HOM05D001900 ORTHO05D009822 1.4e-09 66.6 104 34.6
PGSC0003DMG400001792 Solanum tuberosum HOM05D001900 ORTHO05D009822 1.4e-09 66.6 105 36.2
Zm00001eb024430 Zea mays HOM05D001900 ORTHO05D009822 1.8e-09 66.2 89 37.1
CsaV3_3G010080 Cucumis sativus L. HOM05D001900 ORTHO05D009822 2.3e-09 65.9 104 33.7
DCAR_029556 Daucus carota HOM05D001900 ORTHO05D009822 2.3e-09 65.9 84 39.3
FAN10G3152 Fragaria x ananassa HOM05D001900 ORTHO05D009822 3.0e-09 65.5 87 41.4
CSS0049577 Camellia sinensis var. sinensis HOM05D001900 ORTHO05D009822 3.9e-09 65.1 82 39.0
FAN06G3246 Fragaria x ananassa HOM05D001900 ORTHO05D009822 3.9e-09 65.1 92 39.1
Actinidia05814 Actinidia chinensis HOM05D001900 ORTHO05D009822 8.8e-09 63.9 82 40.2
AagrBONN_evm.TU.Sc2ySwM_117.1440 Anthoceros agrestis HOM05D001900 ORTHO05D003003 2.5e-08 62.4 84 34.5
CAN.G700.25 Capsicum annuum HOM05D001900 ORTHO05D009822 2.5e-08 62.4 88 38.6
MBI04_g28367_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.3e-08 62.0 99 34.3
MBI10_g18272_MAGBIO Magnolia biondii HOM05D001900 ORTHO05D003003 3.3e-08 62.0 90 35.6
SMO228G0056 Selaginella moellendorffii HOM05D001900 ORTHO05D003003 1.3e-07 60.1 87 36.8
CANSAT25G3499 Cannabis sativa HOM05D001900 ORTHO05D009822 2.2e-07 59.3 85 38.8
FvH4_7g02410 Fragaria vesca HOM05D001900 ORTHO05D003003 3.7e-07 58.5 90 37.8
HanXRQChr04g0123561 Helianthus annuus HOM05D001900 ORTHO05D009822 3.7e-07 58.5 84 36.9
Solyc01g020440.3 Solanum lycopersicum HOM05D001900 ORTHO05D003003 3.7e-07 58.5 91 37.4
Sopen01g015760 Solanum pennellii HOM05D001900 ORTHO05D003003 3.7e-07 58.5 91 37.4
FAN15G0949 Fragaria x ananassa HOM05D001900 ORTHO05D003003 6.3e-07 57.8 89 38.2
Os02g0704966 Oryza sativa ssp. japonica HOM05D001900 ORTHO05D003003 6.3e-07 57.8 107 33.6
HPP92_015892 Vanilla planifolia HOM05D001900 ORTHO05D003003 8.2e-07 57.4 88 35.2
Pp3c25_5630 Physcomitrium patens HOM05D001900 ORTHO05D003003 1.1e-06 57.0 88 36.4
GSVIVG01018933001 Vitis vinifera HOM05D001900 ORTHO05D003003 1.1e-06 57.0 85 32.9
Lsat_1_v5_gn_7_10680 Lactuca sativa HOM05D001900 ORTHO05D009822 1.4e-06 56.6 137 30.7
Peaxi162Scf00258g00523 Petunia axillaris HOM05D001900 ORTHO05D003003 1.4e-06 56.6 91 37.4
Sopen01g010500 Solanum pennellii HOM05D001900 ORTHO05D003003 1.4e-06 56.6 91 37.4
FvH4_2g04970 Fragaria vesca HOM05D001900 ORTHO05D003003 1.8e-06 56.2 88 37.5
FAN15G0323 Fragaria x ananassa HOM05D001900 ORTHO05D003003 1.8e-06 56.2 88 37.5
FAN20G1512 Fragaria x ananassa HOM05D001900 ORTHO05D003003 1.8e-06 56.2 88 37.5
FAN24G3538 Fragaria x ananassa HOM05D001900 ORTHO05D003003 1.8e-06 56.2 88 37.5
PRCOL_00007014 Prasinoderma coloniale HOM05D001900 ORTHO05D003003 1.8e-06 56.2 90 37.8
Actinidia31750 Actinidia chinensis HOM05D001900 ORTHO05D009822 2.4e-06 55.8 70 38.6
FAN02G2150 Fragaria x ananassa HOM05D001900 ORTHO05D003003 2.4e-06 55.8 88 36.4
Lj1A1072T25 Lonicera japonica HOM05D001900 ORTHO05D003003 2.4e-06 55.8 83 36.1
SMO271G0133 Selaginella moellendorffii HOM05D001900 ORTHO05D003003 2.4e-06 55.8 91 38.5
TAR381G1572 Trochodendron aralioides HOM05D001900 ORTHO05D003003 2.4e-06 55.8 67 37.3
Lj2g0000438 Lotus japonicus HOM05D001900 ORTHO05D003003 3.1e-06 55.5 72 37.5
Solyc01g020220.3 Solanum lycopersicum HOM05D001900 ORTHO05D003003 3.1e-06 55.5 91 36.3
Sopen01g014330 Solanum pennellii HOM05D001900 ORTHO05D003003 3.1e-06 55.5 91 36.3
CAN.G959.51 Capsicum annuum HOM05D001900 ORTHO05D003003 4.1e-06 55.1 91 35.2
Cc07_g09770 Coffea canephora HOM05D001900 ORTHO05D003003 4.1e-06 55.1 73 32.9
Nitab4.5_0004594g0070 Nicotiana tabacum HOM05D001900 ORTHO05D009822 4.1e-06 55.1 103 33.0
CiPaw.09G166800 Carya illinoinensis HOM05D001900 ORTHO05D003003 5.3e-06 54.7 83 34.9
Dinv13503 Davidia involucrata HOM05D001900 ORTHO05D003003 5.3e-06 54.7 65 36.9
FAN07G0041 Fragaria x ananassa HOM05D001900 ORTHO05D003003 5.3e-06 54.7 91 35.2
FAN14G2403 Fragaria x ananassa HOM05D001900 ORTHO05D003003 5.3e-06 54.7 90 36.7
QL07p018995 Quercus lobata HOM05D001900 ORTHO05D003003 5.3e-06 54.7 83 34.9
RcHm_v2.0_Chr3g0496081 Rosa chinensis HOM05D001900 ORTHO05D003003 5.3e-06 54.7 88 37.5
Haze_20410 Corylus avellana HOM05D001900 ORTHO05D003003 6.9e-06 54.3 83 36.1
MBI01_g21128_MAGBIO Magnolia biondii HOM05D001900 ORTHO05D003003 6.9e-06 54.3 86 37.2
Nitab4.5_0002915g0020 Nicotiana tabacum HOM05D001900 ORTHO05D003003 6.9e-06 54.3 88 34.1
AUR62038453 Chenopodium quinoa HOM05D001900 ORTHO05D003003 9.1e-06 53.9 86 36.0
AUR62042150 Chenopodium quinoa HOM05D001900 ORTHO05D003003 9.1e-06 53.9 86 36.0
Prupe.1G194700 Prunus persica HOM05D001900 ORTHO05D003003 9.1e-06 53.9 88 36.4


User provided reference genes

Program Settings