Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 1.8e-99 365.9 190 100.0
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.6e-42 176.8 175 56.0
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 4.6e-42 175.3 177 54.8
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 6.0e-42 174.9 156 60.9
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.0e-42 174.9 163 58.9
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 6.0e-42 174.9 175 56.0
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 7.9e-42 174.5 175 54.9
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 7.9e-42 174.5 163 59.5
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.0e-41 174.1 176 56.2
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.0e-41 174.1 164 57.3
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.3e-41 173.7 175 54.9
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 1.3e-41 173.7 163 60.7
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 1.8e-41 173.3 158 59.5
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-41 173.3 157 61.1
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 2.3e-41 172.9 173 57.8
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 3.0e-41 172.6 163 60.1
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 3.9e-41 172.2 174 56.3
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 5.1e-41 171.8 161 59.6
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 5.1e-41 171.8 174 55.7
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 6.7e-41 171.4 174 54.6
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 6.7e-41 171.4 158 60.8
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 6.7e-41 171.4 176 56.8
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 8.7e-41 171.0 174 57.5
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 8.7e-41 171.0 173 56.6
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 8.7e-41 171.0 173 53.8
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 8.7e-41 171.0 135 66.7
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 8.7e-41 171.0 171 56.7
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.1e-40 170.6 173 57.2
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.1e-40 170.6 163 57.7
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.5e-40 170.2 158 59.5
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 1.5e-40 170.2 173 56.6
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 1.9e-40 169.9 184 51.6
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.9e-40 169.9 174 54.6
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.5e-40 169.5 174 55.7
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 3.3e-40 169.1 173 56.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 3.3e-40 169.1 177 54.8
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 4.3e-40 168.7 156 57.7
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.3e-40 168.7 168 55.4
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 5.6e-40 168.3 174 54.0
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 5.6e-40 168.3 176 54.5
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 7.4e-40 167.9 173 52.0
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 7.4e-40 167.9 176 53.4
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 7.4e-40 167.9 176 53.4
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 9.6e-40 167.5 177 54.8
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 9.6e-40 167.5 175 55.4
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.3e-39 167.2 176 54.0
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.3e-39 167.2 167 56.9
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 1.6e-39 166.8 176 52.8
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 1.6e-39 166.8 176 52.8
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 2.1e-39 166.4 176 52.3
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 2.8e-39 166.0 176 52.3
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 2.8e-39 166.0 137 62.0
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 2.8e-39 166.0 174 54.0
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 3.7e-39 165.6 173 50.9
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 3.7e-39 165.6 173 50.9
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.7e-39 165.6 176 52.3
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 4.8e-39 165.2 174 54.0
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.8e-39 165.2 174 51.1
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 4.8e-39 165.2 176 52.3
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 4.8e-39 165.2 176 51.7
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 4.8e-39 165.2 176 51.7
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 4.8e-39 165.2 176 51.7
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 4.8e-39 165.2 176 54.5
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 4.8e-39 165.2 101 76.2
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 4.8e-39 165.2 169 55.6
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 4.8e-39 165.2 175 55.4
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 4.8e-39 165.2 179 58.1
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 6.2e-39 164.9 175 53.1
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 6.2e-39 164.9 173 54.3
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 6.2e-39 164.9 165 53.9
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 6.2e-39 164.9 133 62.4
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 6.2e-39 164.9 176 52.8
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 6.2e-39 164.9 170 53.5
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 8.1e-39 164.5 175 54.3
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 8.1e-39 164.5 159 55.3
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 8.1e-39 164.5 159 56.0
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.4e-38 163.7 165 55.2
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 1.8e-38 163.3 172 53.5
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-38 162.9 176 51.1
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 2.4e-38 162.9 176 51.1
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 2.4e-38 162.9 174 51.7
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 2.4e-38 162.9 172 51.7
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 2.4e-38 162.9 168 55.4
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 3.1e-38 162.5 175 53.1
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 3.1e-38 162.5 174 50.0
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 3.1e-38 162.5 176 51.1
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 3.1e-38 162.5 176 53.4
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 3.1e-38 162.5 161 55.9
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 4.0e-38 162.2 171 56.1
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 4.0e-38 162.2 181 54.7
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 4.0e-38 162.2 110 70.0
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 4.0e-38 162.2 110 70.0
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 5.3e-38 161.8 177 51.4
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 5.3e-38 161.8 175 53.1
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 5.3e-38 161.8 174 54.6
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 5.3e-38 161.8 161 55.9
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 5.3e-38 161.8 100 75.0
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 6.9e-38 161.4 173 51.4
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.9e-38 161.4 176 53.4
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 1.2e-37 160.6 175 52.6
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 1.2e-37 160.6 169 55.6
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 1.2e-37 160.6 180 53.3
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 1.2e-37 160.6 159 56.6
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.5e-37 160.2 167 54.5
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 2.0e-37 159.8 169 53.8
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.0e-37 159.8 176 52.3
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.0e-37 159.8 178 51.7
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 2.6e-37 159.5 101 71.3
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.6e-37 159.5 180 49.4
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 2.6e-37 159.5 174 53.4
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.6e-37 159.5 161 54.0
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 4.5e-37 158.7 161 57.1
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 4.5e-37 158.7 107 69.2
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 5.8e-37 158.3 175 52.0
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.3e-36 157.1 142 55.6
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.3e-36 157.1 177 53.1
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.3e-36 157.1 175 52.6
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.7e-36 156.8 181 50.3
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 2.2e-36 156.4 177 53.1
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.9e-36 156.0 175 52.0
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 2.9e-36 156.0 174 50.6
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 3.8e-36 155.6 177 48.6
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.8e-36 155.6 183 49.2
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 3.8e-36 155.6 152 55.9
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.9e-36 155.2 169 53.3
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 6.5e-36 154.8 140 56.4
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.9e-35 153.3 180 48.9
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.9e-35 153.3 159 54.1
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.5e-35 152.9 157 54.1
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 2.5e-35 152.9 166 50.6
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-35 152.5 171 50.3
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.2e-35 152.1 178 48.9
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 4.2e-35 152.1 158 54.4
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 4.2e-35 152.1 172 50.6
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 5.5e-35 151.8 100 71.0
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 7.1e-35 151.4 170 48.8
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 9.3e-35 151.0 170 48.8
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 9.3e-35 151.0 170 48.8
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 9.3e-35 151.0 170 48.8
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 1.2e-34 150.6 176 51.1
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 1.6e-34 150.2 158 53.2
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 7.9e-34 147.9 169 47.9
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.6e-31 140.2 165 48.5
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.1e-31 139.8 144 54.9
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.8e-31 139.4 179 45.8
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 2.8e-31 139.4 124 56.5
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 5.9e-29 131.7 175 46.3
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.0e-28 131.0 140 55.0
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 1.3e-28 130.6 175 46.3
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.8e-28 129.0 175 44.6
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.1e-27 127.5 173 45.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 9.3e-27 124.4 141 48.2
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 3.0e-25 119.4 157 43.3
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 3.9e-25 119.0 218 39.0
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.5e-24 117.1 142 48.6
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 5.7e-24 115.2 134 45.5
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 6.3e-23 111.7 176 42.6
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.1e-22 109.0 70 68.6
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-21 107.5 70 67.1
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 3.6e-18 95.9 180 38.9
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.7e-16 88.6 67 62.7
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 2.2e-15 86.7 53 77.4
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.3e-15 85.1 67 61.2
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 5.0e-12 75.5 44 77.3


User provided reference genes

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