Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02624 Sequoiadendron giganteum HOM05D006109 ORTHO05D007647 4.2e-62 241.1 116 100.0
AagrBONN_evm.TU.Sc2ySwM_228.925 Anthoceros agrestis HOM05D006109 ORTHO05D007647 3.5e-24 115.2 76 63.2
Pp3c24_20 Physcomitrium patens HOM05D006109 ORTHO05D007647 1.0e-23 113.6 76 64.5
ClCG10G014090 Citrullus lanatus HOM05D006109 ORTHO05D007647 2.1e-21 105.9 76 64.5
ATR1091G073 Amborella trichopoda HOM05D006109 ORTHO05D007647 2.7e-21 105.5 76 65.8
DCAR_011234 Daucus carota HOM05D006109 ORTHO05D007647 4.7e-21 104.8 76 61.8
Sed0024403 Sechium edule HOM05D006109 ORTHO05D007647 6.1e-21 104.4 76 61.8
Aqoxy3G01052 Aquilegia oxysepala HOM05D006109 ORTHO05D007647 8.0e-21 104.0 76 61.8
A10p24010 Brassica napus HOM05D006109 ORTHO05D007647 8.0e-21 104.0 77 61.0
C09p62480 Brassica napus HOM05D006109 ORTHO05D007647 8.0e-21 104.0 77 61.0
BolC9t59085H Brassica oleracea HOM05D006109 ORTHO05D007647 8.0e-21 104.0 77 61.0
BraA10t44464Z Brassica rapa HOM05D006109 ORTHO05D007647 8.0e-21 104.0 77 61.0
MELO3C009968.2 Cucumis melo HOM05D006109 ORTHO05D007647 8.0e-21 104.0 76 60.5
Carub.0006s1283 Capsella rubella HOM05D006109 ORTHO05D007647 1.0e-20 103.6 77 61.0
CsaV3_3G042570 Cucumis sativus L. HOM05D006109 ORTHO05D007647 1.0e-20 103.6 76 60.5
Sp6g29380 Schrenkiella parvula HOM05D006109 ORTHO05D007647 1.4e-20 103.2 77 59.7
Atru.chr6.2325 Acer truncatum HOM05D006109 ORTHO05D007647 1.8e-20 102.8 76 63.2
CARHR198660 Cardamine hirsuta HOM05D006109 ORTHO05D007647 1.8e-20 102.8 77 61.0
AL6G25430 Arabidopsis lyrata HOM05D006109 ORTHO05D007647 2.3e-20 102.4 77 59.7
AT5G14660 Arabidopsis thaliana HOM05D006109 ORTHO05D007647 3.0e-20 102.1 77 58.4
CSS0036441 Camellia sinensis var. sinensis HOM05D006109 ORTHO05D007647 3.0e-20 102.1 76 60.5
CSS0045399 Camellia sinensis var. sinensis HOM05D006109 ORTHO05D007647 3.0e-20 102.1 76 60.5
Rhsim10G0019600 Rhododendron simsii HOM05D006109 ORTHO05D007647 3.0e-20 102.1 76 59.2
Aa31LG11G14800 Aethionema arabicum HOM05D006109 ORTHO05D007647 4.0e-20 101.7 77 59.7
Dinv35082 Davidia involucrata HOM05D006109 ORTHO05D007647 4.0e-20 101.7 76 60.5
Migut.K01380 Erythranthe guttata HOM05D006109 ORTHO05D007647 5.2e-20 101.3 76 61.8
Potri.001G346700 Populus trichocarpa HOM05D006109 ORTHO05D007647 5.2e-20 101.3 76 60.5
Oeu043040.1 Olea europaea HOM05D006109 ORTHO05D007647 6.8e-20 100.9 76 57.9
Sc16g0003340 Simmondsia chinensis HOM05D006109 ORTHO05D007647 6.8e-20 100.9 76 61.8
Manes.17G113300 Manihot esculenta HOM05D006109 ORTHO05D007647 8.8e-20 100.5 76 60.5
COL.COLO4_29012 Corchorus olitorius HOM05D006109 ORTHO05D007647 1.2e-19 100.1 76 60.5
Thhalv10014367m.g Eutrema salsugineum HOM05D006109 ORTHO05D007647 1.2e-19 100.1 77 57.1
THA.LOC104822396 Tarenaya hassleriana HOM05D006109 ORTHO05D007647 1.2e-19 100.1 77 59.7
EL10Ac4g09089 Beta vulgaris HOM05D006109 ORTHO05D007647 1.5e-19 99.8 76 61.8
Nitab4.5_0002739g0120 Nicotiana tabacum HOM05D006109 ORTHO05D007647 1.5e-19 99.8 76 61.8
PGR142G0249 Punica granatum HOM05D006109 ORTHO05D007647 2.0e-19 99.4 76 57.9
CiPaw.03G040100 Carya illinoinensis HOM05D006109 ORTHO05D007647 2.6e-19 99.0 76 61.8
ECA238G0132 Erigeron canadensis HOM05D006109 ORTHO05D007647 2.6e-19 99.0 77 57.1
QL02p075892 Quercus lobata HOM05D006109 ORTHO05D007647 2.6e-19 99.0 77 57.1
Nitab4.5_0008215g0030 Nicotiana tabacum HOM05D006109 ORTHO05D007647 3.4e-19 98.6 76 61.8
Gohir.A10G103100 Gossypium hirsutum HOM05D006109 ORTHO05D007647 5.7e-19 97.8 76 56.6
Mapoly0058s0077 Marchantia polymorpha HOM05D006109 ORTHO05D007647 5.7e-19 97.8 76 59.2
Psat3g166600 Pisum sativum HOM05D006109 ORTHO05D007647 5.7e-19 97.8 76 60.5
MSTRG.3294 Avicennia marina HOM05D006109 ORTHO05D007647 7.5e-19 97.4 76 56.6
Cc00_g04250 Coffea canephora HOM05D006109 ORTHO05D007647 7.5e-19 97.4 76 60.5
Hma1.2p1_0993F.1_g245320 Hydrangea macrophylla HOM05D006109 ORTHO05D007647 7.5e-19 97.4 76 53.9
Lj1g0027893 Lotus japonicus HOM05D006109 ORTHO05D007647 7.5e-19 97.4 77 57.1
Phvul.004G149800 Phaseolus vulgaris HOM05D006109 ORTHO05D007647 7.5e-19 97.4 76 60.5
arahy.Tifrunner.gnm1.ann1.N0D599 Arachis hypogaea HOM05D006109 ORTHO05D007647 9.7e-19 97.1 76 60.5
CAN.G206.14 Capsicum annuum HOM05D006109 ORTHO05D007647 9.7e-19 97.1 76 59.2
Sabra16G0226300 Salix brachista HOM05D006109 ORTHO05D007647 9.7e-19 97.1 76 57.9
VMungo0464G1588 Vigna mungo HOM05D006109 ORTHO05D007647 9.7e-19 97.1 76 59.2
Ca_06582_v3 Cicer arietinum L. HOM05D006109 ORTHO05D007647 1.3e-18 96.7 76 61.8
Gohir.D10G087300 Gossypium hirsutum HOM05D006109 ORTHO05D007647 1.3e-18 96.7 76 56.6
Thecc.04G012100 Theobroma cacao HOM05D006109 ORTHO05D007647 1.7e-18 96.3 76 56.6
arahy.Tifrunner.gnm1.ann1.MW1879 Arachis hypogaea HOM05D006109 ORTHO05D007647 2.2e-18 95.9 76 60.5
arahy.Tifrunner.gnm1.ann1.NAGP4P Arachis hypogaea HOM05D006109 ORTHO05D007647 2.2e-18 95.9 76 60.5
arahy.Tifrunner.gnm1.ann1.Z1T37B Arachis hypogaea HOM05D006109 ORTHO05D007647 2.2e-18 95.9 76 60.5
FAN09G4447 Fragaria x ananassa HOM05D006109 ORTHO05D007647 2.2e-18 95.9 81 56.8
FAN14G3710 Fragaria x ananassa HOM05D006109 ORTHO05D007647 2.2e-18 95.9 81 56.8
FvH4_6g50950 Fragaria vesca HOM05D006109 ORTHO05D007647 2.8e-18 95.5 76 57.9
Gorai.011G095500 Gossypium raimondii HOM05D006109 ORTHO05D007647 2.8e-18 95.5 76 56.6
Peaxi162Scf00129g01227 Petunia axillaris HOM05D006109 ORTHO05D007647 2.8e-18 95.5 76 57.9
SalBow5G4602 Salvia bowleyana HOM05D006109 ORTHO05D007647 2.8e-18 95.5 89 56.2
GSVIVG01032450001 Vitis vinifera HOM05D006109 ORTHO05D007647 2.8e-18 95.5 76 56.6
Ciclev10016231m.g Citrus clementina HOM05D006109 ORTHO05D007647 3.7e-18 95.1 76 57.9
MD17G1032100 Malus domestica HOM05D006109 ORTHO05D007647 3.7e-18 95.1 77 57.1
Zm00001eb359100 Zea mays HOM05D006109 ORTHO05D007647 3.7e-18 95.1 77 57.1
Prupe.3G287100 Prunus persica HOM05D006109 ORTHO05D007647 4.8e-18 94.7 77 57.1
Solyc02g086680.4 Solanum lycopersicum HOM05D006109 ORTHO05D007647 4.8e-18 94.7 76 57.9
Sopen02g031440 Solanum pennellii HOM05D006109 ORTHO05D007647 4.8e-18 94.7 76 57.9
CANSAT64G2896 Cannabis sativa HOM05D006109 ORTHO05D007647 6.3e-18 94.4 76 56.6
Haze_14694 Corylus avellana HOM05D006109 ORTHO05D007647 6.3e-18 94.4 76 57.9
HanXRQChr14g0450421 Helianthus annuus HOM05D006109 ORTHO05D007647 6.3e-18 94.4 77 54.5
RcHm_v2.0_Chr2g0172351 Rosa chinensis HOM05D006109 ORTHO05D007647 6.3e-18 94.4 76 56.6
SalBow5G1807 Salvia bowleyana HOM05D006109 ORTHO05D007647 8.3e-18 94.0 120 45.0
Cfa007410 Carpinus fangiana HOM05D006109 ORTHO05D007647 1.1e-17 93.6 76 57.9
MD09G1030300 Malus domestica HOM05D006109 ORTHO05D007647 1.1e-17 93.6 77 55.8
PGSC0003DMG400000518 Solanum tuberosum HOM05D006109 ORTHO05D007647 1.1e-17 93.6 76 57.9
CDE02G3642 Ceratophyllum demersum HOM05D006109 ORTHO05D007647 1.4e-17 93.2 76 56.6
Lj7A594G50 Lonicera japonica HOM05D006109 ORTHO05D007647 1.4e-17 93.2 77 51.9
MBI16_g27082_MAGBIO Magnolia biondii HOM05D006109 ORTHO05D007647 1.4e-17 93.2 76 55.3
Glyma.19G115400 Glycine max HOM05D006109 ORTHO05D007647 1.8e-17 92.8 76 60.5
Medtr7g035310 Medicago truncatula HOM05D006109 ORTHO05D007647 2.4e-17 92.4 76 59.2
Duzib187G0986 Durio zibethinus HOM05D006109 ORTHO05D007647 4.1e-17 91.7 76 55.3
HPP92_016020 Vanilla planifolia HOM05D006109 ORTHO05D007647 4.1e-17 91.7 76 55.3
Eucgr.I01778 Eucalyptus grandis HOM05D006109 ORTHO05D007647 5.3e-17 91.3 76 51.3
Lalb_Chr10g0093951 Lupinus albus HOM05D006109 ORTHO05D007647 5.3e-17 91.3 76 56.6
SalBow5G0229 Salvia bowleyana HOM05D006109 ORTHO05D007647 7.0e-17 90.9 101 49.5
unitig_748.g8596 Utricularia gibba HOM05D006109 ORTHO05D007647 7.0e-17 90.9 100 47.0
arahy.Tifrunner.gnm1.ann1.RE4L3J Arachis hypogaea HOM05D006109 ORTHO05D007647 9.1e-17 90.5 76 57.9
Os01g0637600 Oryza sativa ssp. japonica HOM05D006109 ORTHO05D007647 9.1e-17 90.5 77 54.5
SalBow7G1007 Salvia bowleyana HOM05D006109 ORTHO05D007647 1.6e-16 89.7 101 48.5
Actinidia06012 Actinidia chinensis HOM05D000487 ORTHO05D007647 5.9e-16 87.8 67 58.2
Cpa.g.sc108.27 Carica papaya HOM05D006109 ORTHO05D007647 7.7e-16 87.4 76 50.0
SMO347G0147 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 7.7e-16 87.4 76 50.0
FAN02G3346 Fragaria x ananassa HOM05D006109 ORTHO05D007647 2.9e-15 85.5 91 48.4
CBR_g11073 Chara braunii HOM05D006109 ORTHO05D007647 1.2e-13 80.1 80 50.0
CBR_g10865 Chara braunii HOM05D006109 ORTHO05D007647 1.6e-13 79.7 67 55.2
vmacro05842 Vaccinium macrocarpon HOM05D006109 ORTHO05D007647 4.7e-13 78.2 65 55.4
Hund06951 Selenicereus undatus HOM05D006109 ORTHO05D007647 6.1e-13 77.8 128 36.7
AUR62004904 Chenopodium quinoa HOM05D006109 ORTHO05D007647 3.0e-12 75.5 58 62.1
TAR629G1761 Trochodendron aralioides HOM05D006109 ORTHO05D007647 3.0e-12 75.5 58 56.9
MCO01G286 Micromonas commoda HOM05D006109 ORTHO05D007647 4.0e-12 75.1 60 58.3
Glyma.19G061900 Glycine max HOM05D006109 ORTHO05D007647 1.5e-11 73.2 58 58.6
Os01g0636600 Oryza sativa ssp. japonica HOM05D006109 ORTHO05D007647 3.4e-11 72.0 59 54.2
TPR.G9075 Trifolium pratense HOM05D006109 ORTHO05D007647 4.4e-11 71.6 58 60.3
AUR62001047 Chenopodium quinoa HOM05D006109 ORTHO05D007647 5.7e-11 71.2 58 56.9
AUR62032756 Chenopodium quinoa HOM05D006109 ORTHO05D007647 9.8e-11 70.5 58 56.9
Cre01.g039650 Chlamydomonas reinhardtii HOM05D006109 ORTHO05D007647 1.3e-10 70.1 65 52.3
Cre01.g039750 Chlamydomonas reinhardtii HOM05D006109 ORTHO05D007647 1.3e-10 70.1 65 52.3
Lsat_1_v5_gn_2_91661 Lactuca sativa HOM05D000487 ORTHO05D007647 3.7e-10 68.6 77 46.8
PRCOL_00005209 Prasinoderma coloniale HOM05D006109 ORTHO05D007647 4.8e-10 68.2 57 52.6
Nn4g22741 Nelumbo nucifera HOM05D006109 ORTHO05D007647 7.0e-09 64.3 76 44.7
SMO347G0192 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 7.0e-09 64.3 69 42.0
SGA_v2.0_scaffold30G12428 Striga asiatica HOM05D006109 ORTHO05D007647 1.6e-08 63.2 76 43.4
SGA_v2.0_scaffold30G12431 Striga asiatica HOM05D006109 ORTHO05D007647 2.9e-07 58.9 96 36.5


User provided reference genes

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