Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02474 Sequoiadendron giganteum HOM05D003114 ORTHO05D003519 4.5e-39 164.1 81 100.0
SMO117G0063 Selaginella moellendorffii HOM05D003114 ORTHO05D003519 1.4e-27 125.9 80 71.2
Pp3c11_22450 Physcomitrium patens HOM05D003114 ORTHO05D003519 1.8e-27 125.6 77 76.6
Psat6g010640 Pisum sativum HOM05D003114 ORTHO05D003519 3.4e-26 121.3 76 77.6
AagrBONN_evm.TU.Sc2ySwM_228.1666 Anthoceros agrestis HOM05D003114 ORTHO05D003519 4.4e-26 120.9 80 71.2
AagrBONN_evm.TU.Sc2ySwM_228.1675 Anthoceros agrestis HOM05D003114 ORTHO05D003519 4.4e-26 120.9 80 71.2
Ca_13324_v3 Cicer arietinum L. HOM05D003114 ORTHO05D003519 5.7e-26 120.6 81 72.8
Ciclev10000230m.g Citrus clementina HOM05D003114 ORTHO05D003519 1.3e-25 119.4 81 71.6
Mapoly0013s0072 Marchantia polymorpha HOM05D003114 ORTHO05D003519 1.3e-25 119.4 80 68.8
Potri.002G131400 Populus trichocarpa HOM05D003114 ORTHO05D003519 1.3e-25 119.4 81 71.6
Glyma.09G114500 Glycine max HOM05D003114 ORTHO05D003519 2.9e-25 118.2 81 71.6
Lj5g0027441 Lotus japonicus HOM05D003114 ORTHO05D003519 2.9e-25 118.2 81 71.6
Nitab4.5_0000453g0100 Nicotiana tabacum HOM05D003114 ORTHO05D003519 3.7e-25 117.9 80 70.0
Nitab4.5_0000790g0060 Nicotiana tabacum HOM05D003114 ORTHO05D003519 3.7e-25 117.9 80 70.0
Potri.014G039100 Populus trichocarpa HOM05D003114 ORTHO05D003519 3.7e-25 117.9 81 70.4
Cfa018458 Carpinus fangiana HOM05D003114 ORTHO05D003519 4.9e-25 117.5 76 75.0
Eucgr.A00473 Eucalyptus grandis HOM05D003114 ORTHO05D003519 4.9e-25 117.5 81 70.4
Glyma.17G246600 Glycine max HOM05D003114 ORTHO05D003519 6.4e-25 117.1 81 70.4
Manes.18G031300 Manihot esculenta HOM05D003114 ORTHO05D003519 6.4e-25 117.1 81 70.4
Dinv39367 Davidia involucrata HOM05D003114 ORTHO05D003519 8.3e-25 116.7 81 69.1
Sabra02G0103300 Salix brachista HOM05D003114 ORTHO05D003519 8.3e-25 116.7 81 69.1
ATR0733G144 Amborella trichopoda HOM05D003114 ORTHO05D003519 1.1e-24 116.3 81 71.6
Lalb_Chr24g0399101 Lupinus albus HOM05D003114 ORTHO05D003519 1.1e-24 116.3 81 70.4
Prupe.1G385700 Prunus persica HOM05D003114 ORTHO05D003519 1.1e-24 116.3 81 69.1
Sed0021383 Sechium edule HOM05D003114 ORTHO05D003519 1.1e-24 116.3 81 70.4
Sc07g0007470 Simmondsia chinensis HOM05D003114 ORTHO05D003519 1.1e-24 116.3 81 67.9
Haze_17604 Corylus avellana HOM05D001143 ORTHO05D001457 1.4e-24 115.9 76 73.7
Gohir.A05G197600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.4e-24 115.9 81 69.1
Gohir.D05G200600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.4e-24 115.9 81 69.1
Gorai.009G205900 Gossypium raimondii HOM05D003114 ORTHO05D003519 1.4e-24 115.9 81 69.1
PGSC0003DMG402015451 Solanum tuberosum HOM05D003114 ORTHO05D003519 1.4e-24 115.9 81 69.1
Thecc.08G020200 Theobroma cacao HOM05D003114 ORTHO05D003519 1.4e-24 115.9 81 70.4
Lsat_1_v5_gn_1_19460 Lactuca sativa HOM05D003114 ORTHO05D003519 1.8e-24 115.5 81 69.1
Nn5g29441 Nelumbo nucifera HOM05D003114 ORTHO05D003519 1.8e-24 115.5 81 70.4
Cpa.g.sc64.34 Carica papaya HOM05D003114 ORTHO05D003519 2.4e-24 115.2 81 67.9
TAR625G0620 Trochodendron aralioides HOM05D003114 ORTHO05D003519 2.4e-24 115.2 80 71.2
CAN.G1002.6 Capsicum annuum HOM05D003114 ORTHO05D003519 3.2e-24 114.8 81 67.9
arahy.Tifrunner.gnm1.ann1.E8QAF1 Arachis hypogaea HOM05D003114 ORTHO05D003519 4.1e-24 114.4 81 67.9
arahy.Tifrunner.gnm1.ann1.SVX42N Arachis hypogaea HOM05D003114 ORTHO05D003519 4.1e-24 114.4 81 67.9
TWI36G0061 Tripterygium wilfordii HOM05D003114 ORTHO05D003519 4.1e-24 114.4 81 67.9
Atru.chr13.574 Acer truncatum HOM05D003114 ORTHO05D003519 5.4e-24 114.0 81 67.9
Duzib041G0357 Durio zibethinus HOM05D003114 ORTHO05D003519 5.4e-24 114.0 81 67.9
Duzib093G1140 Durio zibethinus HOM05D003114 ORTHO05D003519 5.4e-24 114.0 81 67.9
Phvul.007G175100 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 5.4e-24 114.0 76 72.4
Ah.02g115940 Amaranthus hybridus HOM05D003114 ORTHO05D003519 7.0e-24 113.6 81 67.9
MSTRG.22284 Avicennia marina HOM05D003114 ORTHO05D003519 7.0e-24 113.6 80 68.8
AUR62038454 Chenopodium quinoa HOM05D003114 ORTHO05D003519 7.0e-24 113.6 81 67.9
AUR62042151 Chenopodium quinoa HOM05D003114 ORTHO05D003519 7.0e-24 113.6 81 67.9
Solyc12g088990.2 Solanum lycopersicum HOM05D003114 ORTHO05D003519 7.0e-24 113.6 76 71.1
Sopen12g030890 Solanum pennellii HOM05D003114 ORTHO05D003519 7.0e-24 113.6 76 71.1
VMungo0647G1221 Vigna mungo HOM05D003114 ORTHO05D003519 7.0e-24 113.6 81 67.9
VMungo1309G2059 Vigna mungo HOM05D003114 ORTHO05D003519 7.0e-24 113.6 80 68.8
Gohir.D11G228600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 9.2e-24 113.2 81 67.9
Gorai.007G245700 Gossypium raimondii HOM05D003114 ORTHO05D003519 9.2e-24 113.2 81 67.9
Hma1.2p1_0260F.1_g104360 Hydrangea macrophylla HOM05D003114 ORTHO05D003519 9.2e-24 113.2 81 66.7
Rhsim12G0123700 Rhododendron simsii HOM05D003114 ORTHO05D003519 9.2e-24 113.2 81 66.7
HPP92_017781 Vanilla planifolia HOM05D003114 ORTHO05D003519 9.2e-24 113.2 81 67.9
GSVIVG01009623001 Vitis vinifera HOM05D003114 ORTHO05D003519 9.2e-24 113.2 76 71.1
MSTRG.1310 Avicennia marina HOM05D003114 ORTHO05D003519 1.2e-23 112.8 80 67.5
EL10Ac5g11704 Beta vulgaris HOM05D003114 ORTHO05D003519 1.2e-23 112.8 80 67.5
DCAR_019495 Daucus carota HOM05D003114 ORTHO05D003519 1.2e-23 112.8 81 65.4
Gohir.A11G227433 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.2e-23 112.8 81 67.9
Lj4C47G8 Lonicera japonica HOM05D003114 ORTHO05D003519 1.2e-23 112.8 81 65.4
Peaxi162Scf00064g00323 Petunia axillaris HOM05D003114 ORTHO05D003519 1.2e-23 112.8 76 71.1
SalBow8G4186 Salvia bowleyana HOM05D003114 ORTHO05D003519 1.2e-23 112.8 81 66.7
TPR.G15746 Trifolium pratense HOM05D003114 ORTHO05D003519 1.2e-23 112.8 75 72.0
MSTRG.24311 Avicennia marina HOM05D003114 ORTHO05D003519 1.6e-23 112.5 76 71.1
ClCG05G019260 Citrullus lanatus HOM05D003114 ORTHO05D003519 1.6e-23 112.5 81 69.1
Oeu015606.1 Olea europaea HOM05D003114 ORTHO05D003519 1.6e-23 112.5 81 66.7
Phvul.001G017700 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 1.6e-23 112.5 81 66.7
THA.LOC104803395 Tarenaya hassleriana HOM05D003114 ORTHO05D003519 1.6e-23 112.5 76 71.1
Aqoxy5G01744 Aquilegia oxysepala HOM05D003114 ORTHO05D003519 2.0e-23 112.1 81 66.7
HanXRQChr02g0045841 Helianthus annuus HOM05D003114 ORTHO05D003519 2.0e-23 112.1 81 65.4
Lalb_Chr08g0245771 Lupinus albus HOM05D003114 ORTHO05D003519 2.0e-23 112.1 81 67.9
Medtr1g021680 Medicago truncatula HOM05D003114 ORTHO05D003519 2.0e-23 112.1 76 71.1
Sed0016520 Sechium edule HOM05D003114 ORTHO05D003519 2.0e-23 112.1 81 67.9
MELO3C003892.2 Cucumis melo HOM05D003114 ORTHO05D003519 2.7e-23 111.7 81 67.9
CsaV3_3G044820 Cucumis sativus L. HOM05D003114 ORTHO05D003519 2.7e-23 111.7 81 67.9
vmacro04486 Vaccinium macrocarpon HOM05D003114 ORTHO05D003519 2.7e-23 111.7 81 65.4
PSO541G3592 Papaver somniferum HOM05D003114 ORTHO05D003519 3.5e-23 111.3 81 67.9
SGA_v2.0_scaffold14G07047 Striga asiatica HOM05D003114 ORTHO05D003519 4.6e-23 110.9 81 64.2
TWI12G1412 Tripterygium wilfordii HOM05D003114 ORTHO05D003519 4.6e-23 110.9 81 65.4
Aqoxy6G00963 Aquilegia oxysepala HOM05D003114 ORTHO05D003519 7.8e-23 110.2 81 64.2
CiPaw.16G052700 Carya illinoinensis HOM05D003114 ORTHO05D003519 7.8e-23 110.2 81 65.4
ECA247G0467 Erigeron canadensis HOM05D003114 ORTHO05D003519 7.8e-23 110.2 76 67.1
SGA_v2.0_scaffold24G10278 Striga asiatica HOM05D003114 ORTHO05D003519 7.8e-23 110.2 80 66.2
Migut.C00667 Erythranthe guttata HOM05D003114 ORTHO05D003519 1.0e-22 109.8 81 64.2
Glyma.04G034700 Glycine max HOM05D003114 ORTHO05D003519 1.0e-22 109.8 80 66.2
FvH4_2g40450 Fragaria vesca HOM05D003114 ORTHO05D003519 1.3e-22 109.4 81 64.2
Nitab4.5_0002940g0050 Nicotiana tabacum HOM05D003114 ORTHO05D003519 1.7e-22 109.0 80 67.5
PSO675G2900 Papaver somniferum HOM05D003114 ORTHO05D003519 1.7e-22 109.0 76 69.7
QL02p007130 Quercus lobata HOM05D003114 ORTHO05D003519 1.7e-22 109.0 77 70.1
Migut.N02678 Erythranthe guttata HOM05D003114 ORTHO05D003519 2.3e-22 108.6 81 64.2
MBI16_g36197_MAGBIO Magnolia biondii HOM05D003114 ORTHO05D003519 2.3e-22 108.6 81 63.0
Migut.E01196 Erythranthe guttata HOM05D003114 ORTHO05D003519 3.0e-22 108.2 81 63.0
Nitab4.5_0008571g0020 Nicotiana tabacum HOM05D003114 ORTHO05D003519 3.0e-22 108.2 75 70.7
Phvul.009G055500 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 3.0e-22 108.2 74 71.6
RcHm_v2.0_Chr6g0300281 Rosa chinensis HOM05D003114 ORTHO05D003519 3.0e-22 108.2 76 67.1
Cc10_g03540 Coffea canephora HOM05D003114 ORTHO05D003519 3.9e-22 107.8 81 63.0
Thhalv10011225m.g Eutrema salsugineum HOM05D003114 ORTHO05D003519 3.9e-22 107.8 81 65.4
MD00G1038900 Malus domestica HOM05D003114 ORTHO05D003519 3.9e-22 107.8 81 63.0
CiPaw.15G069400 Carya illinoinensis HOM05D003114 ORTHO05D003519 5.0e-22 107.5 81 64.2
Lj4C782G7 Lonicera japonica HOM05D003114 ORTHO05D003519 5.0e-22 107.5 80 65.0
PGR031G3129 Punica granatum HOM05D003114 ORTHO05D003519 5.0e-22 107.5 75 69.3
AL1G53790 Arabidopsis lyrata HOM05D003114 ORTHO05D003519 6.6e-22 107.1 81 65.4
Carub.0001s3632 Capsella rubella HOM05D003114 ORTHO05D003519 6.6e-22 107.1 81 65.4
Nn6g32173 Nelumbo nucifera HOM05D003114 ORTHO05D003519 6.6e-22 107.1 80 65.0
CAN.G389.2 Capsicum annuum HOM05D003114 ORTHO05D003519 1.1e-21 106.3 80 65.0
Sp1g34560 Schrenkiella parvula HOM05D003114 ORTHO05D003519 1.1e-21 106.3 81 65.4
TAR381G0473 Trochodendron aralioides HOM05D003114 ORTHO05D003519 1.1e-21 106.3 75 68.0
CARHR037120 Cardamine hirsuta HOM05D003114 ORTHO05D003519 1.5e-21 105.9 76 68.4
Oeu009593.2 Olea europaea HOM05D003114 ORTHO05D003519 1.5e-21 105.9 81 60.5
PSO700G0395 Papaver somniferum HOM05D003114 ORTHO05D003519 1.5e-21 105.9 75 69.3
AT1G47550 Arabidopsis thaliana HOM05D003114 ORTHO05D003519 1.9e-21 105.5 81 64.2
AT1G47560 Arabidopsis thaliana HOM05D003114 ORTHO05D003519 1.9e-21 105.5 81 64.2
CANSAT21G1752 Cannabis sativa HOM05D003114 ORTHO05D003519 1.9e-21 105.5 81 64.2
DCAR_020951 Daucus carota HOM05D003114 ORTHO05D003519 1.9e-21 105.5 80 61.2
PSO170G0663 Papaver somniferum HOM05D003114 ORTHO05D003519 1.9e-21 105.5 75 69.3
unitig_899.g15621 Utricularia gibba HOM05D003114 ORTHO05D003519 1.9e-21 105.5 82 64.6
BcaB07g33828 Brassica carinata HOM05D003114 ORTHO05D003519 2.5e-21 105.1 81 64.2
BcaC08g42958 Brassica carinata HOM05D003114 ORTHO05D003519 2.5e-21 105.1 81 64.2
A10p06300 Brassica napus HOM05D003114 ORTHO05D003519 2.5e-21 105.1 81 64.2
C06p01990 Brassica napus HOM05D003114 ORTHO05D003519 2.5e-21 105.1 81 64.2
BraA10t42896Z Brassica rapa HOM05D003114 ORTHO05D003519 2.5e-21 105.1 81 64.2
FAN20G2585 Fragaria x ananassa HOM05D003114 ORTHO05D003519 2.5e-21 105.1 84 63.1
Lalb_Chr22g0355331 Lupinus albus HOM05D003114 ORTHO05D003519 2.5e-21 105.1 81 63.0
CANSAT25G1109 Cannabis sativa HOM05D003114 ORTHO05D003519 3.3e-21 104.8 81 64.2
Ca_15530_v3 Cicer arietinum L. HOM05D003114 ORTHO05D003519 4.3e-21 104.4 81 61.7
HPP92_006943 Vanilla planifolia HOM05D003114 ORTHO05D003519 4.3e-21 104.4 80 62.5
Lj1g0027709 Lotus japonicus HOM05D003114 ORTHO05D003519 7.3e-21 103.6 66 72.7
Medtr3g111590 Medicago truncatula HOM05D003114 ORTHO05D003519 7.3e-21 103.6 76 63.2
Sopen07g012830 Solanum pennellii HOM05D003114 ORTHO05D003519 1.2e-20 102.8 80 62.5
MD08G1038000 Malus domestica HOM05D003114 ORTHO05D003519 2.8e-20 101.7 80 63.8
Aa31sc119G20 Aethionema arabicum HOM05D003114 ORTHO05D003519 3.6e-20 101.3 66 71.2
CBR_g48206 Chara braunii HOM05D003114 ORTHO05D003519 4.7e-20 100.9 83 62.7
ECA232G2779 Erigeron canadensis HOM05D003114 ORTHO05D003519 4.7e-20 100.9 80 58.8
Lalb_Chr14g0368971 Lupinus albus HOM05D003114 ORTHO05D003519 4.7e-20 100.9 81 59.3
Actinidia38026 Actinidia chinensis HOM05D003114 ORTHO05D003519 1.4e-19 99.4 82 59.8
Zm00001eb051220 Zea mays HOM05D003114 ORTHO05D003519 1.4e-19 99.4 75 62.7
Os03g0625700 Oryza sativa ssp. japonica HOM05D003114 ORTHO05D003519 1.8e-19 99.0 75 61.3
Os11g0276000 Oryza sativa ssp. japonica HOM05D003114 ORTHO05D003519 1.8e-19 99.0 81 58.0
AL1G53840 Arabidopsis lyrata HOM05D003114 ORTHO05D003519 3.1e-19 98.2 80 60.0
CDE04G0236 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 3.1e-19 98.2 81 55.6
HanXRQChr16g0507961 Helianthus annuus HOM05D003114 ORTHO05D003519 5.2e-19 97.4 80 56.2
CDE07G1354 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 8.9e-19 96.7 79 58.2
Lsat_1_v5_gn_4_122980 Lactuca sativa HOM05D003114 ORTHO05D003519 1.5e-18 95.9 80 52.5
Peaxi162Scf01340g00219 Petunia axillaris HOM05D003114 ORTHO05D003519 4.4e-18 94.4 75 62.7
Zm00001eb168790 Zea mays HOM05D003114 ORTHO05D003519 1.3e-17 92.8 81 53.1
FAN15G2607 Fragaria x ananassa HOM05D003114 ORTHO05D003519 1.7e-17 92.4 68 61.8
FAN27G1632 Fragaria x ananassa HOM05D003114 ORTHO05D003519 2.2e-17 92.0 68 61.8
Cfa002225 Carpinus fangiana HOM05D003114 ORTHO05D003519 2.9e-17 91.7 73 61.6
arahy.Tifrunner.gnm1.ann1.06HR6X Arachis hypogaea HOM05D003114 ORTHO05D003519 6.4e-17 90.5 56 76.8
arahy.Tifrunner.gnm1.ann1.I3NIKD Arachis hypogaea HOM05D003114 ORTHO05D003519 6.4e-17 90.5 56 76.8
Gohir.A05G260500 Gossypium hirsutum HOM05D003114 ORTHO05D003519 7.0e-16 87.0 81 50.6
Pp3c11_16180 Physcomitrium patens HOM05D003114 ORTHO05D003519 1.1e-13 79.7 80 46.2
Pp3c1_15530 Physcomitrium patens HOM05D003114 ORTHO05D003519 1.1e-13 79.7 74 52.7
CSS0049055 Camellia sinensis var. sinensis HOM05D003114 ORTHO05D003519 1.9e-13 79.0 68 61.8
CBR_g3845 Chara braunii HOM05D003114 ORTHO05D003519 2.1e-12 75.5 78 50.0
Psat0s2724g0040 Pisum sativum HOM05D003114 ORTHO05D003519 1.2e-10 69.7 43 74.4
HanXRQChr09g0268391 Helianthus annuus HOM05D003114 ORTHO05D003519 3.7e-09 64.7 42 66.7
Cre09.g392000 Chlamydomonas reinhardtii HOM05D003114 ORTHO05D003519 2.4e-08 62.0 79 34.2
Glyma.14G078700 Glycine max HOM05D003114 ORTHO05D003519 3.9e-06 54.7 35 80.0


User provided reference genes

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