Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02109 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 5.5e-59 230.7 112 100.0
SEGI_28465 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 5.0e-28 127.9 72 80.6
SEGI_40039 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 1.1e-24 116.7 71 77.5
ECA236G5120 Erigeron canadensis HOM05D003257 ORTHO05D003749 3.3e-24 115.2 72 69.4
HanXRQChr04g0120771 Helianthus annuus HOM05D003257 ORTHO05D003749 2.2e-23 112.5 72 69.4
Lsat_1_v5_gn_7_3921 Lactuca sativa HOM05D003257 ORTHO05D003749 6.3e-23 110.9 72 65.3
Gohir.D10G138300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 8.2e-23 110.5 74 64.9
Gorai.011G153400 Gossypium raimondii HOM05D003257 ORTHO05D003749 8.2e-23 110.5 74 64.9
HanXRQChr06g0170341 Helianthus annuus HOM05D003257 ORTHO05D003749 1.4e-22 109.8 72 65.3
CDE07G1142 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 3.1e-22 108.6 72 63.9
Gohir.A10G127700 Gossypium hirsutum HOM05D003257 ORTHO05D003749 3.1e-22 108.6 72 63.9
SGA_v2.0_scaffold25G11024 Striga asiatica HOM05D003257 ORTHO05D003749 3.1e-22 108.6 72 63.9
AUR62002512 Chenopodium quinoa HOM05D003257 ORTHO05D003749 7.0e-22 107.5 72 63.9
Sopen05g034140 Solanum pennellii HOM05D003257 ORTHO05D003749 9.1e-22 107.1 72 62.5
SGA_v2.0_scaffold19G08917 Striga asiatica HOM05D003257 ORTHO05D003749 9.1e-22 107.1 72 62.5
Atru.chr3.2621 Acer truncatum HOM05D003257 ORTHO05D003749 1.2e-21 106.7 74 60.8
Sabra17G0005200 Salix brachista HOM05D003257 ORTHO05D003749 1.2e-21 106.7 72 61.1
CAN.G1177.14 Capsicum annuum HOM05D003257 ORTHO05D003749 1.6e-21 106.3 72 61.1
AUR62023682 Chenopodium quinoa HOM05D003257 ORTHO05D003749 1.6e-21 106.3 72 62.5
Pp3c10_24030 Physcomitrium patens HOM05D003257 ORTHO05D003749 1.6e-21 106.3 72 68.1
Pp3c24_960 Physcomitrium patens HOM05D003257 ORTHO05D003749 1.6e-21 106.3 72 66.7
Prupe.7G271500 Prunus persica HOM05D003257 ORTHO05D003749 1.6e-21 106.3 72 63.9
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis HOM05D003257 ORTHO05D003749 2.0e-21 105.9 72 66.7
Solyc11g008870.2 Solanum lycopersicum HOM05D003257 ORTHO05D003749 2.0e-21 105.9 72 59.7
Sopen11g004650 Solanum pennellii HOM05D003257 ORTHO05D003749 2.0e-21 105.9 72 59.7
TAR362G0403 Trochodendron aralioides HOM05D003257 ORTHO05D003749 2.0e-21 105.9 72 62.5
Ah.07g203400 Amaranthus hybridus HOM05D003257 ORTHO05D003749 2.6e-21 105.5 72 61.1
DCAR_027487 Daucus carota HOM05D003257 ORTHO05D003749 2.6e-21 105.5 74 60.8
COL.COLO4_20225 Corchorus olitorius HOM05D003257 ORTHO05D003749 4.5e-21 104.8 72 63.9
Dinv24735 Davidia involucrata HOM05D003257 ORTHO05D003749 4.5e-21 104.8 71 64.8
Gorai.006G223600 Gossypium raimondii HOM05D003257 ORTHO05D003749 4.5e-21 104.8 72 62.5
Thecc.04G195400 Theobroma cacao HOM05D003257 ORTHO05D003749 4.5e-21 104.8 72 61.1
DCAR_005464 Daucus carota HOM05D003257 ORTHO05D003749 5.9e-21 104.4 72 62.5
Duzib268G1600 Durio zibethinus HOM05D003257 ORTHO05D003749 5.9e-21 104.4 72 62.5
MD02G1001200 Malus domestica HOM05D003257 ORTHO05D003749 5.9e-21 104.4 72 62.5
PGSC0003DMG400023361 Solanum tuberosum HOM05D003257 ORTHO05D003749 5.9e-21 104.4 72 61.1
CAN.G532.79 Capsicum annuum HOM05D003257 ORTHO05D003749 7.7e-21 104.0 71 62.0
Medtr1g040105 Medicago truncatula HOM05D003257 ORTHO05D003749 7.7e-21 104.0 76 59.2
PGSC0003DMG400016168 Solanum tuberosum HOM05D003257 ORTHO05D003749 7.7e-21 104.0 72 59.7
TPR.G30222 Trifolium pratense HOM05D003257 ORTHO05D003749 7.7e-21 104.0 72 62.5
TAR633G0285 Trochodendron aralioides HOM05D003257 ORTHO05D003749 7.7e-21 104.0 72 62.5
vmacro00737 Vaccinium macrocarpon HOM05D003257 ORTHO05D003749 7.7e-21 104.0 73 64.4
MELO3C027379.2 Cucumis melo HOM05D003257 ORTHO05D003749 1.0e-20 103.6 72 62.5
Duzib151G0199 Durio zibethinus HOM05D003257 ORTHO05D003749 1.0e-20 103.6 72 62.5
Manes.01G008800 Manihot esculenta HOM05D003257 ORTHO05D003749 1.0e-20 103.6 72 59.7
Nitab4.5_0000971g0090 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.0e-20 103.6 72 58.3
Peaxi162Scf00344g00056 Petunia axillaris HOM05D003257 ORTHO05D003749 1.0e-20 103.6 72 59.7
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 63.9
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 62.5
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 62.5
EL10Ac3g06195 Beta vulgaris HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 58.3
FvH4_1g00040 Fragaria vesca HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 61.1
FAN26G1737 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 61.1
FAN28G1981 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 61.1
Gohir.A09G206300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 61.1
Sc25g0002280 Simmondsia chinensis HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 58.3
Solyc05g055730.4 Solanum lycopersicum HOM05D003257 ORTHO05D003749 1.3e-20 103.2 72 61.1
CSS0030539 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.7e-20 102.8 72 59.7
CAN.G694.27 Capsicum annuum HOM05D003257 ORTHO05D003749 1.7e-20 102.8 72 61.1
CDE06G0339 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 1.7e-20 102.8 72 59.7
Gohir.D09G199900 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.7e-20 102.8 72 61.1
Nitab4.5_0001653g0120 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.7e-20 102.8 72 56.9
PGR042G2645 Punica granatum HOM05D003257 ORTHO05D003749 1.7e-20 102.8 73 61.6
BraA09t40660Z Brassica rapa HOM05D003257 ORTHO05D003749 2.2e-20 102.4 72 59.7
Hund22692 Selenicereus undatus HOM05D003257 ORTHO05D003749 2.2e-20 102.4 72 61.1
MSTRG.24536 Avicennia marina HOM05D003257 ORTHO05D003749 2.9e-20 102.1 72 56.9
CsaV3_2G011840 Cucumis sativus L. HOM05D003257 ORTHO05D003749 2.9e-20 102.1 72 62.5
SMO367G0955 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 2.9e-20 102.1 72 62.5
FAN23G0512 Fragaria x ananassa HOM05D003257 ORTHO05D003749 3.8e-20 101.7 72 59.7
Glyma.04G256100 Glycine max HOM05D003257 ORTHO05D003749 3.8e-20 101.7 72 61.1
Glyma.06G325300 Glycine max HOM05D003257 ORTHO05D003749 3.8e-20 101.7 72 61.1
Mapoly0107s0040 Marchantia polymorpha HOM05D003257 ORTHO05D003749 3.8e-20 101.7 72 69.4
Nitab4.5_0003263g0060 Nicotiana tabacum HOM05D003257 ORTHO05D003749 3.8e-20 101.7 72 58.3
Potri.017G000300 Populus trichocarpa HOM05D003257 ORTHO05D003749 3.8e-20 101.7 72 58.3
Rhsim09G0000900 Rhododendron simsii HOM05D003257 ORTHO05D003749 3.8e-20 101.7 77 61.0
SGA_v2.0_scaffold12G06250 Striga asiatica HOM05D003257 ORTHO05D003749 3.8e-20 101.7 71 60.6
GSVIVG01019374001 Vitis vinifera HOM05D003257 ORTHO05D003749 3.8e-20 101.7 74 58.1
A09p52310 Brassica napus HOM05D003257 ORTHO05D003749 5.0e-20 101.3 72 58.3
Oeu028194.1 Olea europaea HOM05D003257 ORTHO05D003749 5.0e-20 101.3 72 59.7
Peaxi162Scf00156g00015 Petunia axillaris HOM05D003257 ORTHO05D003749 5.0e-20 101.3 76 59.2
CiPaw.02G126200 Carya illinoinensis HOM05D003257 ORTHO05D003749 6.5e-20 100.9 72 61.1
ClCG06G008390 Citrullus lanatus HOM05D003257 ORTHO05D003749 6.5e-20 100.9 72 62.5
Ciclev10019406m.g Citrus clementina HOM05D003257 ORTHO05D003749 6.5e-20 100.9 72 58.3
Os03g0815200 Oryza sativa ssp. japonica HOM05D003257 ORTHO05D003749 6.5e-20 100.9 72 59.7
BcaB01g03327 Brassica carinata HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 62.5
CSS0014401 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 58.3
CSS0029511 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 58.3
CiPaw.01G204000 Carya illinoinensis HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 58.3
Ca_26297_v3 Cicer arietinum L. HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 59.7
PSO339G3074 Papaver somniferum HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 58.3
PSO384G1169 Papaver somniferum HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 58.3
Potri.007G147300 Populus trichocarpa HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 58.3
QL10p065198 Quercus lobata HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 59.7
RcHm_v2.0_Chr2g0084261 Rosa chinensis HOM05D003257 ORTHO05D003749 8.5e-20 100.5 72 59.7
BcaC07g40402 Brassica carinata HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 59.7
A05p04270 Brassica napus HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 61.1
C04p05050 Brassica napus HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 62.5
BolC4t22138H Brassica oleracea HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 62.5
BraA05t19412Z Brassica rapa HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 61.1
Lju124A8T11 Lonicera japonica HOM05D003257 ORTHO05D003749 1.1e-19 100.1 73 60.3
Phvul.007G281200 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 1.1e-19 100.1 71 59.2
SalBow6G1509 Salvia bowleyana HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 59.7
Sp4g26240 Schrenkiella parvula HOM05D003257 ORTHO05D003749 1.1e-19 100.1 72 62.5
A07p24920 Brassica napus HOM05D003257 ORTHO05D003749 1.5e-19 99.8 72 59.7
BraA07t30134Z Brassica rapa HOM05D003257 ORTHO05D003749 1.5e-19 99.8 72 59.7
Haze_11091 Corylus avellana HOM05D003257 ORTHO05D003749 1.9e-19 99.4 72 61.1
Sed0018493 Sechium edule HOM05D003257 ORTHO05D003749 1.9e-19 99.4 72 59.7
Sc19g0002470 Simmondsia chinensis HOM05D003257 ORTHO05D003749 1.9e-19 99.4 72 54.2
Duzib212G0020 Durio zibethinus HOM05D003257 ORTHO05D003749 2.5e-19 99.0 72 58.3
BcaC02g12332 Brassica carinata HOM05D003257 ORTHO05D003749 3.2e-19 98.6 72 61.1
BcaC07g40537 Brassica carinata HOM05D003257 ORTHO05D003749 3.2e-19 98.6 72 56.9
C08p34970 Brassica napus HOM05D003257 ORTHO05D003749 3.2e-19 98.6 72 56.9
BolC8t51101H Brassica oleracea HOM05D003257 ORTHO05D003749 3.2e-19 98.6 72 56.9
Lalb_Chr03g0037991 Lupinus albus HOM05D003257 ORTHO05D003749 3.2e-19 98.6 72 59.7
THA.LOC104804412 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 3.2e-19 98.6 72 56.9
VMungo0647G2577 Vigna mungo HOM05D003257 ORTHO05D003749 4.2e-19 98.2 71 59.2
Zm00001eb062180 Zea mays HOM05D003257 ORTHO05D003749 4.2e-19 98.2 72 58.3
Zm00001eb440710 Zea mays HOM05D003257 ORTHO05D003749 4.2e-19 98.2 72 58.3
AT3G59970 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 5.5e-19 97.8 72 58.3
Cpa.g.sc9.233 Carica papaya HOM05D003257 ORTHO05D003749 5.5e-19 97.8 72 55.6
Eucgr.A00394 Eucalyptus grandis HOM05D003257 ORTHO05D003749 5.5e-19 97.8 73 58.9
MD15G1141700 Malus domestica HOM05D003257 ORTHO05D003749 5.5e-19 97.8 74 59.5
Psat6g114760 Pisum sativum HOM05D003257 ORTHO05D003749 5.5e-19 97.8 71 57.7
CARHR139330 Cardamine hirsuta HOM05D003257 ORTHO05D003749 7.2e-19 97.4 72 59.7
Cfa008541 Carpinus fangiana HOM05D003257 ORTHO05D003749 7.2e-19 97.4 72 59.7
Lalb_Chr01g0020651 Lupinus albus HOM05D003257 ORTHO05D003749 7.2e-19 97.4 72 59.7
Carub.0005s2670 Capsella rubella HOM05D003257 ORTHO05D003749 9.4e-19 97.1 72 58.3
CARHR170290 Cardamine hirsuta HOM05D003257 ORTHO05D003749 9.4e-19 97.1 72 56.9
Aqoxy2G00629 Aquilegia oxysepala HOM05D003257 ORTHO05D003749 1.2e-18 96.7 72 55.6
AL6G43600 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 1.2e-18 96.7 74 59.5
Thhalv10001367m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 1.2e-18 96.7 72 59.7
Aa31LG10G14190 Aethionema arabicum HOM05D003257 ORTHO05D003749 1.6e-18 96.3 72 56.9
BcaC08g45017 Brassica carinata HOM05D003257 ORTHO05D003749 1.6e-18 96.3 71 57.7
C06p26490 Brassica napus HOM05D003257 ORTHO05D003749 1.6e-18 96.3 71 57.7
BolC6t37812H Brassica oleracea HOM05D003257 ORTHO05D003749 1.6e-18 96.3 71 57.7
Migut.N03006 Erythranthe guttata HOM05D003257 ORTHO05D003749 1.6e-18 96.3 72 55.6
Thhalv10005854m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 1.6e-18 96.3 72 56.9
Nn7g37414 Nelumbo nucifera HOM05D003257 ORTHO05D003749 1.6e-18 96.3 72 55.6
SalBow3G4227 Salvia bowleyana HOM05D003257 ORTHO05D003749 1.6e-18 96.3 72 54.2
Sed0024427 Sechium edule HOM05D003257 ORTHO05D003749 1.6e-18 96.3 72 58.3
unitig_27.g25139 Utricularia gibba HOM05D003257 ORTHO05D003749 1.6e-18 96.3 71 56.3
THA.LOC104802525 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 2.1e-18 95.9 72 55.6
AL5G42150 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 2.7e-18 95.5 72 56.9
TWI15G1037 Tripterygium wilfordii HOM05D003257 ORTHO05D003749 2.7e-18 95.5 72 54.2
VMungo0464G1907 Vigna mungo HOM05D003257 ORTHO05D003749 2.7e-18 95.5 69 59.4
AT2G44160 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 3.6e-18 95.1 72 59.7
Carub.0004s2671 Capsella rubella HOM05D003257 ORTHO05D003749 3.6e-18 95.1 72 58.3
BcaB06g29361 Brassica carinata HOM05D003257 ORTHO05D003749 4.7e-18 94.7 72 58.3
A04p33220 Brassica napus HOM05D003257 ORTHO05D003749 4.7e-18 94.7 72 58.3
C04p70910 Brassica napus HOM05D003257 ORTHO05D003749 4.7e-18 94.7 72 58.3
BraA04t18781Z Brassica rapa HOM05D003257 ORTHO05D003749 4.7e-18 94.7 72 58.3
Nn1g09394 Nelumbo nucifera HOM05D003257 ORTHO05D003749 4.7e-18 94.7 72 52.8
Sp5g03210 Schrenkiella parvula HOM05D003257 ORTHO05D003749 4.7e-18 94.7 72 55.6
Aa31LG1G25830 Aethionema arabicum HOM05D003257 ORTHO05D003749 8.0e-18 94.0 70 57.1
Lj3g0005174 Lotus japonicus HOM05D003257 ORTHO05D003749 8.0e-18 94.0 72 56.9
AL4G43040 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 1.0e-17 93.6 72 59.7
AL4G43080 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 1.0e-17 93.6 72 59.7
BcaB06g29359 Brassica carinata HOM05D003257 ORTHO05D003749 1.0e-17 93.6 72 56.9
AL5G24360 Arabidopsis lyrata HOM05D003257 ORTHO05D001652 1.4e-17 93.2 72 58.3
Actinidia18382 Actinidia chinensis HOM05D003257 ORTHO05D003749 2.3e-17 92.4 72 56.9
CANSAT54G2167 Cannabis sativa HOM05D003257 ORTHO05D003749 5.2e-17 91.3 77 55.8
Hund12292 Selenicereus undatus HOM05D003257 ORTHO05D003749 8.8e-17 90.5 60 63.3
CANSAT56G2399 Cannabis sativa HOM05D003257 ORTHO05D003749 5.7e-16 87.8 73 53.4
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 5.7e-16 87.8 79 53.2
Actinidia02460 Actinidia chinensis HOM05D003257 ORTHO05D003749 6.3e-15 84.3 99 45.5
CBR_g37215 Chara braunii HOM05D003257 ORTHO05D003749 6.3e-15 84.3 73 52.1
RcHm_v2.0_Chr1g0319671 Rosa chinensis HOM05D003257 ORTHO05D003749 2.7e-13 79.0 67 50.7
Nitab4.5_0006595g0040 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.0e-12 77.0 55 58.2
FvH4_7g02331 Fragaria vesca HOM05D003257 ORTHO05D003749 2.2e-12 75.9 67 47.8
Cre10.g433600 Chlamydomonas reinhardtii HOM05D003257 ORTHO05D003749 1.1e-11 73.6 71 47.9
BcaB01g06154 Brassica carinata HOM05D003257 ORTHO05D003749 1.9e-11 72.8 71 50.7
Cfa021656 Carpinus fangiana HOM05D003257 ORTHO05D003749 7.2e-11 70.9 71 45.1
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 4.7e-10 68.2 90 42.2
PRCOL_00004214 Prasinoderma coloniale HOM05D003257 ORTHO05D003749 8.0e-10 67.4 72 40.3
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla HOM05D003257 ORTHO05D003749 1.8e-09 66.2 47 61.7
Lj2A826G20 Lonicera japonica HOM05D003257 ORTHO05D003749 1.2e-08 63.5 63 49.2
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 1.5e-08 63.2 48 60.4
SEGI_14640 Sequoiadendron giganteum HOM05D004602 ORTHO05D005906 7.5e-08 60.8 63 47.6
SEGI_37933 Sequoiadendron giganteum HOM05D004602 ORTHO05D005906 7.5e-08 60.8 63 47.6
GSVIVG01038275001 Vitis vinifera HOM05D003257 ORTHO05D003749 1.7e-07 59.7 52 48.1
MBI15_g33460_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 5.4e-06 54.7 34 61.8
SEGI_23750 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 7.0e-06 54.3 40 62.5


User provided reference genes

Program Settings