Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 4.4e-289 997.3 517 100.0
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 3.3e-183 645.6 517 61.7
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 6.2e-182 641.3 517 60.5
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 3.1e-181 639.0 517 62.3
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 3.2e-178 629.0 517 61.7
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 3.2e-178 629.0 517 60.7
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 4.1e-178 628.6 518 60.6
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 1.6e-177 626.7 509 62.7
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 3.5e-177 625.5 517 60.7
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 7.8e-177 624.4 517 61.3
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 3.9e-176 622.1 517 60.5
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 3.9e-176 622.1 516 60.1
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 5.1e-176 621.7 519 60.1
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 6.6e-176 621.3 530 60.2
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 8.6e-176 620.9 517 60.0
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 1.1e-175 620.5 530 59.8
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 4.7e-174 615.1 517 59.4
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 8.1e-174 614.4 514 61.1
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 1.4e-173 613.6 544 59.0
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.4e-173 613.6 533 59.7
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 1.4e-173 613.6 533 59.5
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 4.0e-173 612.1 517 60.3
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 9.0e-173 610.9 530 58.5
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 1.2e-172 610.5 517 59.4
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.6e-172 609.4 520 59.8
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 2.6e-172 609.4 514 60.7
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 2.6e-172 609.4 532 59.8
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 2.6e-172 609.4 531 59.3
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 3.4e-172 609.0 530 59.4
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 7.6e-172 607.8 517 59.2
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 2.9e-171 605.9 518 60.0
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 3.8e-171 605.5 518 60.4
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 8.4e-171 604.4 525 57.9
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 1.4e-170 603.6 517 60.3
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 2.4e-170 602.8 514 59.9
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 5.4e-170 601.7 543 56.9
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 5.4e-170 601.7 514 59.7
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 5.4e-170 601.7 531 58.2
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 7.8e-169 597.8 514 59.3
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 1.0e-168 597.4 532 58.1
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 1.0e-168 597.4 530 57.9
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 1.3e-168 597.0 570 54.6
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.7e-168 596.7 517 58.8
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 1.7e-168 596.7 530 58.3
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.7e-168 596.7 527 58.3
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 1.7e-168 596.7 510 58.4
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 8.7e-168 594.3 537 57.0
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 1.1e-167 594.0 530 57.0
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 1.5e-167 593.6 518 57.3
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 9.6e-167 590.9 515 58.6
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.3e-166 590.5 536 56.5
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 2.8e-166 589.3 573 53.8
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 2.4e-165 586.3 518 58.9
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 6.9e-165 584.7 500 58.4
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 1.2e-164 583.9 507 59.0
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.7e-163 580.1 518 56.6
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 2.9e-163 579.3 514 57.6
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 4.9e-163 578.6 517 58.0
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 1.9e-162 576.6 533 56.3
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 3.2e-162 575.9 520 56.7
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 9.3e-162 574.3 510 57.1
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 2.1e-161 573.2 517 57.6
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 2.7e-161 572.8 518 56.2
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 4.6e-161 572.0 541 55.6
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 3.0e-160 569.3 518 56.9
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 3.0e-160 569.3 517 56.7
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 6.7e-160 568.2 516 57.0
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 5.6e-159 565.1 516 57.0
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 9.6e-159 564.3 518 56.6
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 2.8e-158 562.8 517 56.3
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 3.7e-158 562.4 516 57.2
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 6.2e-158 561.6 521 55.1
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 2.4e-157 559.7 518 55.8
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 4.0e-157 558.9 529 55.8
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 5.3e-157 558.5 471 60.7
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 5.3e-157 558.5 521 55.1
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 3.4e-156 555.8 517 55.3
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 9.9e-156 554.3 517 55.1
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.3e-155 553.9 521 54.3
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 3.8e-155 552.4 517 57.1
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 4.9e-155 552.0 520 54.2
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.9e-154 550.1 530 54.9
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 4.2e-154 548.9 521 55.1
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 7.1e-154 548.1 529 54.6
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 9.3e-154 547.7 536 54.1
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 6.0e-153 545.0 517 55.9
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 1.3e-152 543.9 550 52.7
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 2.3e-152 543.1 532 53.6
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 2.3e-152 543.1 517 54.7
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 3.0e-152 542.7 537 53.3
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 6.7e-152 541.6 520 54.2
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 7.4e-151 538.1 531 54.0
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 1.6e-150 537.0 531 55.2
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.6e-150 537.0 489 56.4
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.6e-150 537.0 506 55.3
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 2.8e-150 536.2 507 54.0
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 3.7e-150 535.8 531 54.8
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 6.2e-150 535.0 531 53.9
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.4e-149 533.9 508 54.9
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 4.0e-149 532.3 538 52.4
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 1.7e-147 526.9 517 54.0
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 1.2e-145 520.8 517 54.4
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 3.5e-145 519.2 529 52.0
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 1.1e-143 514.2 513 51.1
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 6.3e-142 508.4 514 52.1
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 2.2e-139 500.0 530 49.4
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 1.9e-138 496.9 472 54.7
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 4.6e-137 492.3 433 57.3
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.6e-129 467.2 446 55.6
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 3.0e-128 463.0 450 54.4
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 1.5e-127 460.7 501 48.3
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 6.5e-123 445.3 508 44.7
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 5.0e-115 419.1 356 60.1
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 7.0e-109 398.7 395 53.4
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 7.2e-106 388.7 471 44.6
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 2.0e-103 380.6 455 48.4
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 1.1e-90 338.2 388 47.4
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 7.3e-82 308.9 470 41.1
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 5.3e-48 196.4 139 66.9
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.2e-31 142.1 440 31.4
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 3.8e-30 137.1 123 54.5
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 8.4e-30 136.0 136 54.4
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 9.0e-24 115.9 143 42.7
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 1.0e-22 112.5 261 33.0
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 4.2e-21 107.1 79 65.8
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 2.3e-19 101.3 77 62.3
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 2.8e-17 94.4 73 60.3
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.7e-17 94.0 72 63.9
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 1.2e-15 89.0 104 46.2
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 1.7e-14 85.1 61 62.3
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 2.2e-14 84.7 249 30.1
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-09 68.9 51 56.9
AagrBONN_evm.TU.Sc2ySwM_340.525 Anthoceros agrestis HOM05D005650 ORTHO05D007020 8.5e-06 56.2 47 44.7


User provided reference genes

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