Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 9.8e-144 513.5 261 100.0
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 6.2e-114 414.5 210 99.0
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 2.9e-26 123.2 154 44.8
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 3.7e-26 122.9 149 47.0
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 3.7e-26 122.9 149 48.3
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 3.7e-26 122.9 149 48.3
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 8.3e-26 121.7 130 50.8
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 8.3e-26 121.7 130 50.8
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 8.3e-26 121.7 153 45.8
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 1.9e-25 120.6 128 51.6
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 5.4e-25 119.0 149 46.3
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 7.0e-25 118.6 130 49.2
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 7.0e-25 118.6 129 51.2
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 1.2e-24 117.9 153 47.1
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 1.6e-24 117.5 153 45.1
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.6e-24 117.5 153 45.1
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.6e-24 117.5 153 45.1
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 2.0e-24 117.1 129 50.4
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.7e-24 116.7 156 44.2
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.7e-24 116.7 137 46.7
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 2.7e-24 116.7 138 48.6
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 3.5e-24 116.3 162 40.7
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 4.6e-24 115.9 122 50.8
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 6.0e-24 115.5 128 49.2
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 6.0e-24 115.5 153 44.4
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 7.8e-24 115.2 135 48.1
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 7.8e-24 115.2 138 49.3
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 7.8e-24 115.2 170 44.1
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 1.0e-23 114.8 154 44.8
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 1.0e-23 114.8 152 44.1
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 1.3e-23 114.4 134 50.0
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 1.3e-23 114.4 135 48.9
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.7e-23 114.0 158 43.7
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 3.0e-23 113.2 128 48.4
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 3.0e-23 113.2 129 48.8
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 3.9e-23 112.8 124 49.2
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 3.9e-23 112.8 130 46.9
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 3.9e-23 112.8 128 49.2
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 5.0e-23 112.5 130 48.5
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.0e-23 112.5 158 43.0
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 6.6e-23 112.1 197 38.1
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 6.6e-23 112.1 121 48.8
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 8.6e-23 111.7 122 49.2
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 8.6e-23 111.7 158 43.7
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 8.6e-23 111.7 121 48.8
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 2.5e-22 110.2 122 49.2
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 3.3e-22 109.8 122 49.2
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 4.3e-22 109.4 151 41.7
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 5.6e-22 109.0 122 50.0
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 5.6e-22 109.0 163 43.6
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 5.6e-22 109.0 122 49.2
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 5.6e-22 109.0 122 49.2
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 9.5e-22 108.2 130 45.4
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 9.5e-22 108.2 154 43.5
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 9.5e-22 108.2 155 42.6
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.2e-21 107.8 129 45.7
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 1.2e-21 107.8 154 43.5
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.2e-21 107.8 130 46.2
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 1.6e-21 107.5 122 47.5
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 1.6e-21 107.5 120 47.5
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 1.6e-21 107.5 153 42.5
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 2.1e-21 107.1 130 47.7
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 2.1e-21 107.1 161 42.9
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 2.1e-21 107.1 161 42.9
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 2.1e-21 107.1 161 42.9
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 2.8e-21 106.7 154 42.2
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 2.8e-21 106.7 131 48.1
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 2.8e-21 106.7 124 47.6
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 3.6e-21 106.3 143 44.8
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 3.6e-21 106.3 165 40.6
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 3.6e-21 106.3 123 47.2
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 3.6e-21 106.3 122 50.8
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 4.7e-21 105.9 187 38.0
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 6.2e-21 105.5 124 47.6
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 6.2e-21 105.5 131 47.3
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 6.2e-21 105.5 123 47.2
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 6.2e-21 105.5 120 45.8
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 6.2e-21 105.5 130 46.9
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 1.1e-20 104.8 125 47.2
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 1.1e-20 104.8 206 36.4
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 1.4e-20 104.4 126 49.2
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.8e-20 104.0 187 39.6
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 1.8e-20 104.0 124 48.4
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 2.3e-20 103.6 124 48.4
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 3.1e-20 103.2 135 45.2
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 3.1e-20 103.2 125 47.2
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 3.1e-20 103.2 148 43.2
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 3.1e-20 103.2 130 43.8
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 4.0e-20 102.8 129 43.4
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 5.2e-20 102.4 130 45.4
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.2e-19 101.3 142 43.7
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 1.5e-19 100.9 130 46.2
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 3.4e-19 99.8 142 43.7
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 4.4e-19 99.4 124 45.2
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 4.4e-19 99.4 124 45.2
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 5.8e-19 99.0 135 45.9
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 2.2e-18 97.1 155 40.6
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 2.9e-18 96.7 115 48.7
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 2.9e-18 96.7 122 41.8
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 3.7e-18 96.3 124 45.2
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 1.1e-17 94.7 122 39.3
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.4e-17 94.4 152 38.8
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 1.4e-17 94.4 175 35.4
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 1.9e-17 94.0 132 43.2
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 3.2e-17 93.2 130 43.1
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 2.1e-16 90.5 214 32.7
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 6.0e-16 89.0 128 42.2
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.3e-14 82.8 137 36.5
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 7.3e-14 82.0 161 30.4
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 6.2e-13 79.0 112 41.1
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 8.1e-13 78.6 122 38.5
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.4e-12 77.8 175 34.3
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 4.0e-12 76.3 90 50.0
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 4.0e-12 76.3 121 36.4
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 1.3e-10 71.2 74 51.4
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.2e-10 70.5 107 40.2
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 3.9e-07 59.7 84 38.1
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 5.1e-07 59.3 182 30.8
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 1.5e-06 57.8 80 37.5


User provided reference genes

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