Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01850 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.4e-40 168.3 82 100.0
SEGI_14591 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.1e-08 63.2 41 68.3
SEGI_39807 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.2e-08 61.2 41 65.9
SEGI_03182 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_03250 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_04865 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_12525 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_13805 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_15176 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_16998 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_21641 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_26611 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_28893 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_30442 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_31503 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_33273 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_33973 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_36063 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_38038 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_38653 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_40506 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
SEGI_41165 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.5e-08 60.8 41 65.9
Rhsim03G0225400 Rhododendron simsii HOM05D002899 ORTHO05D003850 7.1e-08 60.5 40 70.0
SEGI_18505 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 7.1e-08 60.5 41 65.9
SEGI_19004 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 7.1e-08 60.5 78 42.3
SEGI_23817 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 9.3e-08 60.1 41 65.9
SEGI_01205 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.2e-07 59.7 41 63.4
SEGI_09653 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.2e-07 59.7 41 63.4
SEGI_24652 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.2e-07 59.7 41 63.4
ECA247G1085 Erigeron canadensis HOM05D002899 ORTHO05D003850 1.6e-07 59.3 40 72.5
SEGI_02942 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.6e-07 59.3 41 63.4
SEGI_35117 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.6e-07 59.3 41 63.4
Sed0007587 Sechium edule HOM05D002899 ORTHO05D003850 3.5e-07 58.2 63 54.0
SEGI_19651 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.6e-07 57.8 40 60.0
SEGI_25006 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.6e-07 57.8 41 63.4
SEGI_39097 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.6e-07 57.8 40 62.5
TAR375G0529 Trochodendron aralioides HOM05D002899 ORTHO05D003850 4.6e-07 57.8 43 67.4
Cfa016110 Carpinus fangiana HOM05D002899 ORTHO05D003850 6.1e-07 57.4 40 70.0
Atru.chr6.914 Acer truncatum HOM05D002899 ORTHO05D003850 7.9e-07 57.0 40 70.0
Lsat_1_v5_gn_9_37520 Lactuca sativa HOM05D002899 ORTHO05D003850 7.9e-07 57.0 44 63.6
TAR633G0361 Trochodendron aralioides HOM05D002899 ORTHO05D003850 7.9e-07 57.0 43 67.4
unitig_21.g20691 Utricularia gibba HOM05D002899 ORTHO05D003850 7.9e-07 57.0 74 47.3
Atru.chr12.1814 Acer truncatum HOM05D002899 ORTHO05D003850 1.0e-06 56.6 40 70.0
CiPaw.05G210800 Carya illinoinensis HOM05D002899 ORTHO05D003850 1.0e-06 56.6 40 70.0
HanXRQChr10g0291501 Helianthus annuus HOM05D002899 ORTHO05D003850 1.0e-06 56.6 64 51.6
Lsat_1_v5_gn_9_37500 Lactuca sativa HOM05D002899 ORTHO05D003850 1.0e-06 56.6 40 70.0
Sed0003802 Sechium edule HOM05D002899 ORTHO05D003850 1.0e-06 56.6 63 50.8
AUR62024879 Chenopodium quinoa HOM05D002899 ORTHO05D003850 1.3e-06 56.2 40 70.0
AUR62031081 Chenopodium quinoa HOM05D002899 ORTHO05D003850 1.3e-06 56.2 47 61.7
ClCG02G007900 Citrullus lanatus HOM05D002899 ORTHO05D003850 1.3e-06 56.2 63 50.8
ATR1098G071 Amborella trichopoda HOM05D002899 ORTHO05D003850 1.8e-06 55.8 43 65.1
Haze_00347 Corylus avellana HOM05D002899 ORTHO05D003850 1.8e-06 55.8 40 67.5
MELO3C024757.2 Cucumis melo HOM05D002899 ORTHO05D003850 1.8e-06 55.8 63 50.8
Actinidia08787 Actinidia chinensis HOM05D002899 ORTHO05D003850 2.3e-06 55.5 40 67.5
CsaV3_2G035840 Cucumis sativus L. HOM05D002899 ORTHO05D003850 2.3e-06 55.5 63 50.8
Duzib128G1532 Durio zibethinus HOM05D002899 ORTHO05D003850 2.3e-06 55.5 64 48.4
Psat4g207720 Pisum sativum HOM05D002899 ORTHO05D003850 2.3e-06 55.5 48 58.3
Potri.019G043200 Populus trichocarpa HOM05D002899 ORTHO05D003850 2.3e-06 55.5 43 65.1
SEGI_25306 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.3e-06 55.5 41 61.0
Cpa.g.sc43.153 Carica papaya HOM05D002899 ORTHO05D003850 3.0e-06 55.1 40 67.5
Gohir.D10G191600 Gossypium hirsutum HOM05D002899 ORTHO05D003850 3.0e-06 55.1 40 67.5
Gorai.011G214400 Gossypium raimondii HOM05D002899 ORTHO05D003850 3.0e-06 55.1 40 67.5
Sabra19G0053900 Salix brachista HOM05D002899 ORTHO05D003850 3.0e-06 55.1 40 67.5
SEGI_20785 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.0e-06 55.1 40 62.5
TWI38G1169 Tripterygium wilfordii HOM05D002899 ORTHO05D003850 3.0e-06 55.1 40 67.5
CSS0044416 Camellia sinensis var. sinensis HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
CDE05G1238 Ceratophyllum demersum HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
COL.COLO4_33467 Corchorus olitorius HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Dinv04696 Davidia involucrata HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Gohir.A11G221200 Gossypium hirsutum HOM05D002899 ORTHO05D003850 3.9e-06 54.7 64 48.4
Gohir.D11G234700 Gossypium hirsutum HOM05D002899 ORTHO05D003850 3.9e-06 54.7 64 48.4
Gorai.007G247300 Gossypium raimondii HOM05D002899 ORTHO05D003850 3.9e-06 54.7 64 48.4
HanXRQChr15g0463941 Helianthus annuus HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Hma1.2p1_1059F.1_g253030 Hydrangea macrophylla HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Lj5P331T27 Lonicera japonica HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Lj9C24T10 Lonicera japonica HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Lju926C12T4 Lonicera japonica HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
MBI02_g25679_MAGBIO Magnolia biondii HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
Rhsim06G0232100 Rhododendron simsii HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
RcHm_v2.0_Chr4g0414501 Rosa chinensis HOM05D002899 ORTHO05D010192 3.9e-06 54.7 45 53.3
SEGI_14447 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.9e-06 54.7 41 61.0
Thecc.05G227100 Theobroma cacao HOM05D002899 ORTHO05D003850 3.9e-06 54.7 40 67.5
CBR_g50354 Chara braunii HOM05D002899 ORTHO05D003850 5.1e-06 54.3 40 62.5
AUR62030668 Chenopodium quinoa HOM05D002899 ORTHO05D003850 5.1e-06 54.3 40 67.5
Oeu027900.2 Olea europaea HOM05D002899 ORTHO05D003850 5.1e-06 54.3 43 62.8
QL03p062749 Quercus lobata HOM05D002899 ORTHO05D003850 5.1e-06 54.3 40 65.0
SHI02598 Sapria himalayana HOM05D002899 ORTHO05D003850 5.1e-06 54.3 59 54.2
Ah.12g063970 Amaranthus hybridus HOM05D002899 ORTHO05D003850 6.7e-06 53.9 40 65.0
MSTRG.8559 Avicennia marina HOM05D002899 ORTHO05D003850 6.7e-06 53.9 40 65.0
Manes.09G130600 Manihot esculenta HOM05D002899 ORTHO05D003850 6.7e-06 53.9 40 65.0
Sc06g0010130 Simmondsia chinensis HOM05D002899 ORTHO05D003850 6.7e-06 53.9 43 62.8
Sc09g0008520 Simmondsia chinensis HOM05D002899 ORTHO05D003850 6.7e-06 53.9 43 62.8
Sc11g0002190 Simmondsia chinensis HOM05D002899 ORTHO05D003850 6.7e-06 53.9 43 62.8
Actinidia27037 Actinidia chinensis HOM05D002899 ORTHO05D003850 8.7e-06 53.5 40 65.0
EL10Ac2g02592 Beta vulgaris HOM05D002899 ORTHO05D003850 8.7e-06 53.5 40 65.0
CDE02G4151 Ceratophyllum demersum HOM05D000614 ORTHO05D000463 8.7e-06 53.5 40 65.0
Medtr8g010350 Medicago truncatula HOM05D002899 ORTHO05D003850 8.7e-06 53.5 44 61.4
Oeu028990.1 Olea europaea HOM05D002899 ORTHO05D003850 8.7e-06 53.5 40 65.0
Peaxi162Scf01026g00001 Petunia axillaris HOM05D002899 ORTHO05D003850 8.7e-06 53.5 40 65.0
PGR142G0302 Punica granatum HOM05D002899 ORTHO05D003850 8.7e-06 53.5 44 59.1
QL03p062784 Quercus lobata HOM05D002899 ORTHO05D003850 8.7e-06 53.5 40 62.5
QL03p066723 Quercus lobata HOM05D002899 ORTHO05D003850 8.7e-06 53.5 40 62.5


User provided reference genes

Program Settings